mRNA_L-elsbetiae_contig14844.3501.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 189 bits (480), Expect = 9.210e-53 Identity = 131/248 (52.82%), Postives = 159/248 (64.11%), Query Frame = 1 Query: 298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREK-KFEGE-ELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTL--RRRARRRGVVLTPLLR 1026 +PLD AA GH EVV ELI+Q G+ GCGG+SGGV+AL A++ + + IM L +AGVVDTG+AL AA G ETP+KFLL Q + K + AYVN RD G TPL+ + PRVVRLL +AGADTTS GG I TPL LT + +R+K K G EQLH LE IRRLLL+V+AVHA SWLW SD STI+ AA + ++TT+ +TLP L RRRAR R V L LLR Sbjct: 188 LPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHY---RPRVVRLLVEAGADTTSPVAVRNQLGGDDVSI-TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDI-STITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLR 430
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.500e-50 Identity = 121/251 (48.21%), Postives = 155/251 (61.75%), Query Frame = 1 Query: 298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAG-VVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNA-RDLCGATPLMNATITFC--CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL----LRMTLPTLRRRARRRGVVLTPLLR 1026 VPL++AAL G+ +V RE+I+Q G++GCGG SGGV+AL A++E+ + MA L+DAG VVDTG AL AA +G VKFLL+R++ DAYVN RD G TP+M A C+P++VRLL DAGA+TT A G TR + TPLA TT LRE + +GE +EQL L+ R LL + +AVHA SWLW S P I+ AA K +T S LR P LRR+ RGV+L L R Sbjct: 184 VPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADA---DAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFR 431
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 182 bits (461), Expect = 6.750e-50 Identity = 128/269 (47.58%), Postives = 159/269 (59.11%), Query Frame = 1 Query: 244 ADASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNA-RDLCGATPLM-NATITFC-CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTI-----SAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026 A A+ LL N +A +PLD AA G VV EL+Q+ G++GCGG +GGV AL A+ + M +M L AGVVDTG+AL A G VKFLLQ+Q P AYV+ RD CG TPL+ N + C+P+VVRLL DAGADTTS T PG + + TPL+L T+ LR K + + +E L LE IRRLLL+V+AVHATSWLW + P +AA E + TT+ LR LP LRRRAR RG V L R Sbjct: 169 AKANPLLTRVN--LAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTL-PVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCR 434
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 181 bits (459), Expect = 6.910e-49 Identity = 124/246 (50.41%), Postives = 154/246 (62.60%), Query Frame = 1 Query: 298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQ-RQEEKPVGWD-AYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKF-EGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026 VPLD+AA GH++VVRELIQ+ G++GC S G AL FA+ Q + IMA L +AGVVDTG AL AA G E VKFLL+ R +E G + AY+NARD+ G TPL+ T APR+VR+L DAGADTTS GG+V F TPLA T LR+K +G+ +E L LE I RLLL+VDAVHA SWLW S AP I A E + L++ LP L+RR +RR ++ LLR Sbjct: 280 VPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPF-IGRATETDPEPPLP-ALKLMLPILKRRTKRRCGLVATLLR 522
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 171 bits (434), Expect = 3.980e-46 Identity = 120/254 (47.24%), Postives = 151/254 (59.45%), Query Frame = 1 Query: 295 IVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCA------PRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPS----TISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026 ++PLD AA G+ V+RELIQ+ G++GCGG S G AL+ A E +R+ MA L AGVVDTG AL +A G E VK+LLQ K G AYVN RD G TPL+++ + C PRV RLL +AGADTT+ T + G +V F TPL LT L++KK +G + +++L LE IRRLLLQV+AVHA SWLW S + +AA + L LP LRRRARR GVV T L R Sbjct: 170 LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA-KHYGPGAYVNVRDRNGTTPLLSSI--YVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMG-VVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCR 419
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 166 bits (420), Expect = 7.640e-44 Identity = 136/337 (40.36%), Postives = 171/337 (50.74%), Query Frame = 1 Query: 28 VMALLKAGADFEASTLEGSTPLYMAAEGGQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMT---LPTLRRRARRRGVVLTPLLR 1026 V ALLKAG++ +G+TPLY AA G A A LL ++ + +PLDVAA GH EVV ELI+Q G+ GCGG+SGG AL A+ R+ IMA L DAGVVDTG+AL AA G E P+KFLL Q + K AY+N + G T L++ C PRVV+LL +AGADTTS PG +F TPL LT L + + L E+ + LE IRRLLL+ +AVHA SWLW SD P TI+ A K +TT+ T + + RR R R +L LLR Sbjct: 131 VTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLL---------------------------------AKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQR---CRPRVVQLLVEAGADTTSPVLICNQPGED-DFHITPLGLTMCLLGGRS--AKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTP-TITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLR 427
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.140e-43 Identity = 112/263 (42.59%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 259 LLGSSNRHIADDIV-PLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLM-NATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL-----LRMTLPTLRRRARRRGVVLTPLLR 1026 LLG + ++ I+ PLD A + H+ VVR+LIQQ G++GCGGAS G A +A + Q+ I+ L D G +DTG L AA+ GSE VK LLQ+Q K + WD YVN + G TP++ +PRV+RL DAGADT S T G + F GTPLA TT LR+++ G + + + SLE +RR+LLQ++A+ A SW W SDA S+I A + + + S L L +TLP RR+AR R V++ + R Sbjct: 334 LLGRMDTYLRGRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLPR-RRKARARRVLVMAMSR 594
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.390e-41 Identity = 109/245 (44.49%), Postives = 141/245 (57.55%), Query Frame = 1 Query: 298 VPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIG-TPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNL-LRMTLPTLRRRARRRGVVLTPLLR 1026 VPLD AAL GH V REL+Q+ G++GC GAS GV AL A+ +Q + +MA L DAGVVDTG AL G E +KFLL+++ E RD G TPL++A +T C+PRVVRLL DAGAD T A R P G TPL T L EK + + +QL +L RRLLLQV+ VHATSWLW A + ++ + ++T+ L+ LP + RR+ RRG L + R Sbjct: 183 VPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSA-VTTGPCSPRVVRLLVDAGADATL---AVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 159 bits (401), Expect = 2.100e-41 Identity = 119/259 (45.95%), Postives = 140/259 (54.05%), Query Frame = 1 Query: 250 ASALLGSSNRHIADDIVPLDVAALKGHSEVVRELIQQRGVKGCGGASGGVQALVFASEEQRMYIMATLVDAGVVDTGVALCGAARSGSETPVKFLLQRQEEKPVGWDAYVN-ARDLCGATPLMNATITFC-CCAPRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPST---ISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVL 1011 A+ LL S VPLDVA GHSEVVREL Q GV+GCGG SGGV++L A+ EQ + IM L GVVDTG AL AA + E VKFLLQ Q G YVN D G TPL+ TI C +PR+ R L DA ADT S T++ G TPL T LR+ K + EEQL SL+ I RLL QVDAVHA SWLW S + AA+ + K LL+ LR +RGVV+ Sbjct: 156 ANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAG---GGAWYVNNTLDPFGRTPLV-CTIEACGSSSPRIARFLIDAEADTKSTVLVTKS-GQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 153 bits (386), Expect = 4.800e-41 Identity = 103/203 (50.74%), Postives = 124/203 (61.08%), Query Frame = 1 Query: 427 QRMYIMATLVDAGVVDT-GVALCGAARSGSETPVKFLL-QRQEEKPVGWDAYVNARDLCGATPLMNATITFCCCA-PRVVRLLTDAGADTTSAFGATRTPGGMVEFIGTPLALTTDWLREKKFEGEELKEEQLHSLERIRRLLLQVDAVHATSWLWYSDAPSTISAAAEKNKNKTTSNLLRMTLPTLRRRARRRGVVLTPLLR 1026 Q M IMA L AGV D G L G A G E V+FLL QR++E + AY N+ D G TPL + +I +C PR+VRLL DAGADTTS T GG VE+ TPLA+TT LREK +G+ EEQLH L+ IRRLLL+VDAVHA SWLW SDAPS + A + L +TLP L+RRA+ V + LLR Sbjct: 3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPL-SCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGG-VEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR 203 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14844.3501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14844.3501.1 >prot_L-elsbetiae_contig14844.3501.1 ID=prot_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp MALLKAGADFEASTLEGSTPLYMAAEGGQSAVVAALIETGANPDTRVPSGback to top mRNA from alignment at L-elsbetiae_contig14844:3118..4168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14844.3501.1 ID=mRNA_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1051bp|location=Sequence derived from alignment at L-elsbetiae_contig14844:3118..4168+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14844:3118..4168+ >mRNA_L-elsbetiae_contig14844.3501.1 ID=mRNA_L-elsbetiae_contig14844.3501.1|Name=mRNA_L-elsbetiae_contig14844.3501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig14844:3118..4168+ (Laminarionema elsbetiae ELsaHSoW15)back to top |