mRNA_L-elsbetiae_contig14834.3495.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.670e-34 Identity = 78/135 (57.78%), Postives = 94/135 (69.63%), Query Frame = 1 Query: 25 AGPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMG-APTRETRSAKRLSAMRVPVARARVVTWKLSASGLQKM-GDALSKAKYFIFDQAFNGNV-RGVAWPREL 420 AGPSRCLDA IALNQA+ G+ WYTST +LQLASLELCA+CRS+ L++ V+ GTPTRLW G A TRETRS KR + RVPV RAR VTWKL L+ M GDA S+ F F+ ++ RG+ WP +L Sbjct: 7 AGPSRCLDALIIALNQASGGE-----WYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 136
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 134 bits (338), Expect = 1.420e-31 Identity = 76/134 (56.72%), Postives = 91/134 (67.91%), Query Frame = 1 Query: 28 GPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMG-APTRETRSAKRLSAMRVPVARARVVTWKLSASGLQKM-GDALSKAKYFIFDQAFNGNV-RGVAWPREL 420 GPSRCLDA IALNQA+ G+ WYTST +LQL SLELCAACRS+ L++ V+ GTP RLW G A TRETRS KR + RVPV RAR VTWKL L+ M GDA S+ F F+ ++ RG+ WP +L Sbjct: 39 GPSRCLDALIIALNQASGGE-----WYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 167
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.060e-26 Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 1 Query: 25 AGPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMG----APTRETR--SAKRLSAMRVPVARARVVTWKLSASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELRGLT 432 AGPSRCLDAF +ALNQA DG WY ST++LQL+SL C ACRSVPT+ +KV++ TP RL+ G A R+ S+KR+ A RVP RAR VTW+LS + G LS + F+ A N ++ W +R L+ Sbjct: 25 AGPSRCLDAFKVALNQACDGG----GWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDGMRSLS 162
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.200e-21 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 25 AGPSR--CLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRETRSAKRLSAMRVPVARARVVTWKL-SASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELR 423 +GP+R CL+A +ALN+ +DGK SWYTSTKE QLASLE C ACR+ TL++KV+ TP RL + A KRL RVP RAR VTW + +A+GL+ ++ A F +AF ++ VAWPR L+ Sbjct: 5 SGPARDSCLNAIIVALNETSDGK----SWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRL-LAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLK 135
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 4.040e-21 Identity = 64/135 (47.41%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 28 GPSR--CLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRETRSAKRLSAMRVPVARARVVTWKL-SASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELR 423 GP+R CL +ALN+ DGK SWYTSTKELQLASLELC ACR TL + V+ TP RL + A + KRL RVP RAR TW + +ASG++ A Y F QAF+G++ + WPR L+ Sbjct: 130 GPTRSSCLKTLTVALNETCDGK----SWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRL-LAAADAPSPHPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLK 259
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: D8LRD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD1_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 1.920e-19 Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 121 ELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRETRSAKRLSAMRVPVARARVVTWKLSASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELRGL 429 +LQLASL+LC +CRSVP L V+V++ TPT LW P RETR AK+ RVPV +ARVVTWKLS+ L G++L+ FIF V G+ WP ++ L Sbjct: 2 QLQLASLQLCISCRSVPRLHVRVDRSTPTPLWARPPERETRRAKQRRVGRVPVVQARVVTWKLSSQRLGLSGESLASVPCFIFGNQGIDQVGGMRWPPAIQTL 104
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 1.550e-18 Identity = 61/136 (44.85%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 28 GPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKG-TPTRLWMGAPTRETRS-AKRLSAMRVPVARARVVTWKLSASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELRGL 429 GP RCL+AF +ALN + DG WYTSTKELQLASL+ C CR VP+L + V P RLW E R+ AKR S VPV R R VTW A L + +K + F+ Q + V V WP L+ L Sbjct: 3 GPGRCLEAFAVALNTSCDGN----VWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDICLVFAKVERFLVRQ--DTVVDDVVWPCRLKKL 132
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 8.020e-18 Identity = 59/135 (43.70%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 28 GPSR--CLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRETRSAKRLSAMRVPVARARVVTWKL-SASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELR 423 GP+R CL+A +ALN+ DGK SWYTSTKELQLASL+ C ACR+ T+ + V++ P RL A KRL RVP R+R VTW + +A+ L+ A++ +Y F AF ++ V WP LR Sbjct: 45 GPTRKFCLEALIVALNETCDGK----SWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHP-KRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLR 174
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 1.020e-17 Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 40 CLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRETRSAKRLSAMRVPVARARVVTWKL-SASGLQKMGDALSKAKYFIFDQAFNGNVRGVAWPRELRGL 429 CL+A +AL + DGK SWYTSTKELQLASLE C ACR+ TL + V+ P R+ + A + KRLS RVP RAR VTW + +A+ L+ AL + F AF G++ V WPR L + Sbjct: 36 CLNAIYVALGETRDGK----SWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIP-RMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESI 161
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 4.170e-17 Identity = 53/103 (51.46%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 28 GPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCAACRSVPTLEVKVEKGTPTRLWMGAPTRE----TRSAKRLSAMRVPVARARVVTWKLSASGL 324 G +R DAF IAL+QA +G + WYTST ELQL SL++C ACRS PTL V+V GTPT LW PT + T+S+K RVPV RA +TW S L Sbjct: 5 GYTRSFDAFAIALSQACEGGE--KRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLW-SPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETL 104 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14834.3495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14834.3495.1 >prot_L-elsbetiae_contig14834.3495.1 ID=prot_L-elsbetiae_contig14834.3495.1|Name=mRNA_L-elsbetiae_contig14834.3495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp MTCASSNHAGPSRCLDAFPIALNQATDGKRWCRSWYTSTKELQLASLELCback to top mRNA from alignment at L-elsbetiae_contig14834:1117..2883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14834.3495.1 ID=mRNA_L-elsbetiae_contig14834.3495.1|Name=mRNA_L-elsbetiae_contig14834.3495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1767bp|location=Sequence derived from alignment at L-elsbetiae_contig14834:1117..2883- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14834:1117..2883- >mRNA_L-elsbetiae_contig14834.3495.1 ID=mRNA_L-elsbetiae_contig14834.3495.1|Name=mRNA_L-elsbetiae_contig14834.3495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2502bp|location=Sequence derived from alignment at L-elsbetiae_contig14834:1117..2883- (Laminarionema elsbetiae ELsaHSoW15)back to top |