mRNA_L-elsbetiae_contig1481.3485.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1481.3485.1 vs. uniprot
Match: D8LKK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK6_ECTSI) HSP 1 Score: 315 bits (807), Expect = 1.330e-101 Identity = 166/215 (77.21%), Postives = 187/215 (86.98%), Query Frame = 1 Query: 325 MYREQEAEEHSEDEDYEGPGKFDAFDRPAFKRRPIKNRNIQWALEDRKDYSKGGGIKYLGDKITQQMSRYATFKVDPERPQTIEVTPIDEWWQFKKAARDAGKMMSVKEAEEQMKKQDNFLGPLSLANKVLGRKTMEAAAREGGGSSRYGNLDREDTQVLQEAGVKLGGPED--GMNSVENQSGSEEGFGA-EKGDVDSDAGGEDDDFGDEVRSD 960 MYREQEAEEHSEDEDYEGPGKFDAF+RPAFKRR IK R IQWALEDR+D+++GGGIKY GDKITQQMSRYATFKVDP RPQTIEVTPIDEWWQFKKA +D GK M+VKEAEE MKKQ+NFLGPLSLAN++LG+K++EAAA+E SRYG LD EDTQVL+EAG+KL PED ++ + SGS+ G G EKG+VDSDAGGEDDDFGDEVRSD Sbjct: 1 MYREQEAEEHSEDEDYEGPGKFDAFERPAFKRRTIKTRAIQWALEDRRDHAQGGGIKYTGDKITQQMSRYATFKVDPNRPQTIEVTPIDEWWQFKKAPKDTGKNMTVKEAEELMKKQENFLGPLSLANRILGKKSLEAAAKEKAEQSRYGGLDHEDTQVLKEAGMKLASPEDTQAVDGFGDGSGSDGGAGEIEKGEVDSDAGGEDDDFGDEVRSD 215 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1481.3485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1481.3485.1 >prot_L-elsbetiae_contig1481.3485.1 ID=prot_L-elsbetiae_contig1481.3485.1|Name=mRNA_L-elsbetiae_contig1481.3485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=339bp WVNPANRQVVVAVSCGQAKIHPTRLMSGKAAATGKGAAARGPGKKGPPNKback to top mRNA from alignment at L-elsbetiae_contig1481:19728..25516+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1481.3485.1 ID=mRNA_L-elsbetiae_contig1481.3485.1|Name=mRNA_L-elsbetiae_contig1481.3485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5789bp|location=Sequence derived from alignment at L-elsbetiae_contig1481:19728..25516+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1481:19728..25516+ >mRNA_L-elsbetiae_contig1481.3485.1 ID=mRNA_L-elsbetiae_contig1481.3485.1|Name=mRNA_L-elsbetiae_contig1481.3485.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2034bp|location=Sequence derived from alignment at L-elsbetiae_contig1481:19728..25516+ (Laminarionema elsbetiae ELsaHSoW15)back to top |