mRNA_L-elsbetiae_contig1478.3466.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: D7FVT1_ECTSI (Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT1_ECTSI) HSP 1 Score: 378 bits (970), Expect = 1.830e-125 Identity = 176/199 (88.44%), Postives = 187/199 (93.97%), Query Frame = 1 Query: 1 QGANVQTKDGSIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPTHPLIDGAGRLRMQRLSPDKWLPTIDASQVIGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGFLGDKEGGACPVRVMGVSGKWFWEGSREAFIR 597 Q ANV+T++GSIF+W L VPGGKGTSWEGLVYDL VTFSRRHPFEPPRVDFPRTHRNV+NP HPL+D GRLRMQ+LS DKWLPTI+ASQVIGWL+HLFETEPP VTSGN CPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDG LG+KEGGACPVRVMG SGKWFWEGSREAFIR Sbjct: 23 QTANVRTEEGSIFKWILDVPGGKGTSWEGLVYDLEVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIR 221
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A6H5J9W3_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W3_9PHAE) HSP 1 Score: 373 bits (957), Expect = 4.370e-119 Identity = 173/199 (86.93%), Postives = 184/199 (92.46%), Query Frame = 1 Query: 1 QGANVQTKDGSIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPTHPLIDGAGRLRMQRLSPDKWLPTIDASQVIGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGFLGDKEGGACPVRVMGVSGKWFWEGSREAFIR 597 Q ANV+T++GSI +W L VPGGKGTSWEGLVYDL VTFSRRHPFEPPRVDFPRTHRNV+NP HPL+D G LRMQ+LSPDKWLPTI+ASQVI WL+HLFETEPP VTSGN CPFTHLSSETVLQVH FLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDG LG+KEGGACPVRVMG SGKWFWEGSREAFIR Sbjct: 126 QTANVRTEEGSILKWILDVPGGKGTSWEGLVYDLKVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGCLRMQKLSPDKWLPTIEASQVISWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHAFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIR 324
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: UPI00174F60B0 (SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F60B0) HSP 1 Score: 54.7 bits (130), Expect = 4.930e-6 Identity = 31/91 (34.07%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 13 VQTKDGSI--FEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPTHPLIDGAGRLRMQRLSPDK-WLPTIDASQVI 276 + +DG++ +W AVPG +GT+WEG ++ L ++F +PF PP F V HP + +G + + L+ DK W P I QV+ Sbjct: 29 TKNRDGTLNLMKWKCAVPGKRGTAWEGGLFKLRLSFKEDYPFSPPTCQF------VPPLFHPNVYPSGVVCLSILNEDKDWRPGITIKQVL 113
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A7R9YNM5_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNM5_DIALT) HSP 1 Score: 53.9 bits (128), Expect = 7.390e-6 Identity = 38/115 (33.04%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 25 DGS--IFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDF-PRTHRNVANPTHPLIDGAGRLRMQRLSPDK-WLPTIDASQVIGWLYHLFETEPPSVTSGNRCPFTHLSS 357 DGS I W AVPG KGT WEG +Y + + FS +P +PP+ F PR HP + +G + + L +K W P+I Q++ + L + P + R P+ L + Sbjct: 37 DGSFNIMLWECAVPGKKGTDWEGGLYRITMEFSDEYPSKPPKCKFNPRIF-------HPNVYPSGTICLSILDENKGWKPSITVKQMLLGIQDLLDN-PNNNDPAQREPYDLLKN 143
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A7I4Z514_HAECO (UBC core domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4Z514_HAECO) HSP 1 Score: 53.9 bits (128), Expect = 1.120e-5 Identity = 34/137 (24.82%), Postives = 62/137 (45.26%), Query Frame = 1 Query: 31 SIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDF-PRTHRNVANPTHPLIDGAGRLRMQRLSPDK-WLPTIDASQVIGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHML 435 ++F+W AVPG KGT WEG +Y + + F+ +P PP F P + HP + GR+ + L D+ W P I +V+ ++ + P+ + + ++ + + DA + R + M+ Sbjct: 37 NLFKWICAVPGKKGTIWEGGLYKIHIYFNDAYPSTPPICKFDPPVY-------HPNVSYTGRICLSILYEDQGWKPAISLKEVLIGIHDFLDDPNPNDPAQDDASLVYVRNRAAYEERVRRDARTIFRPDRVLAQMM 166
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A4Y7QJM4_9AGAM (Ubiquitin-conjugating enzyme 9 n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7QJM4_9AGAM) HSP 1 Score: 53.1 bits (126), Expect = 1.830e-5 Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 1 Query: 13 VQTKDGS--IFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPTHPLIDGAGRLRMQRLSPDK-WLPTIDASQVI 276 + DGS + EW + +PG GTSWEG V+ L +TF +P +PP+ F HP + +G + + L +K W P+I Q++ Sbjct: 29 AKAADGSMNLMEWEVGIPGKAGTSWEGGVFKLNMTFPEDYPTKPPKCKF------TPALFHPNVYPSGTVCLSILDEEKSWKPSITIKQIL 113
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A182V7P0_ANOME (UBC core domain-containing protein n=1 Tax=Anopheles merus TaxID=30066 RepID=A0A182V7P0_ANOME) HSP 1 Score: 53.1 bits (126), Expect = 1.830e-5 Identity = 33/91 (36.26%), Postives = 44/91 (48.35%), Query Frame = 1 Query: 13 VQTKDGSI--FEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPTHPLIDGAGRLRMQRLSPDK-WLPTIDASQVI 276 V+ DGSI W AVPG KGT WEG +Y L + F +P PP F V HP + +G + M L D+ W P + Q++ Sbjct: 29 VKNSDGSIDLMTWECAVPGKKGTLWEGGLYKLRMLFLEDYPATPPDCQF------VPPLFHPNVYPSGIIAMSLLDEDRDWRPAMTIKQIL 113
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: H2XMB6_CIOIN (UBC core domain-containing protein n=2 Tax=Ciona TaxID=7718 RepID=H2XMB6_CIOIN) HSP 1 Score: 52.0 bits (123), Expect = 5.200e-5 Identity = 32/96 (33.33%), Postives = 47/96 (48.96%), Query Frame = 1 Query: 31 SIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPT--HPLIDGAGRLRMQRLSPDK-WLPTIDASQVIGWLYHLFETEP 309 ++ W A+PG KGTSWEG +Y + + F +P PP+ F P HP + +G + + L DK W P I Q++ + L TEP Sbjct: 38 NLMNWECAIPGKKGTSWEGGLYKIRMIFKDDYPSSPPKCRF--------EPALFHPNVYPSGTVCLSILDEDKDWRPAITIKQILLGIQDLL-TEP 124
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A0N5A7J8_9BILA (UBIQUITIN_CONJUGAT_2 domain-containing protein n=2 Tax=Oxyuridae TaxID=51026 RepID=A0A0N5A7J8_9BILA) HSP 1 Score: 52.0 bits (123), Expect = 5.510e-5 Identity = 33/102 (32.35%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 13 VQTKDGS--IFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPT--HPLIDGAGRLRMQRLSPDK-WLPTIDASQVIGWLYHLFET 303 VQ DG+ +F W A+PG KGT WEG +Y L + F P PP+ F P HP + +G + + L +K W P+I Q++ + L ++ Sbjct: 29 VQNPDGTRNLFNWECAIPGKKGTIWEGGLYKLRMQFKDDFPSSPPKCKF--------EPPLFHPNVYPSGTVCLSLLDENKDWKPSITVKQLLIGIQDLLDS 122
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Match: A0A671SDY4_9TELE (SUMO-conjugating enzyme UBC9-B-like n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671SDY4_9TELE) HSP 1 Score: 50.8 bits (120), Expect = 8.460e-5 Identity = 30/95 (31.58%), Postives = 46/95 (48.42%), Query Frame = 1 Query: 31 SIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDFPRTHRNVANPT--HPLIDGAGRLRMQRLSPDK-WLPTIDASQVIGWLYHLFETE 306 ++ W A+PG KGT WEG ++ L + F +P PP+ F P HP + +G + + L DK W P I QVI + + ++ E Sbjct: 43 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKF--------EPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQVIPFSFCIWAAE 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1478.3466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1478.3466.1 >prot_L-elsbetiae_contig1478.3466.1 ID=prot_L-elsbetiae_contig1478.3466.1|Name=mRNA_L-elsbetiae_contig1478.3466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=200bp QGANVQTKDGSIFEWALAVPGGKGTSWEGLVYDLLVTFSRRHPFEPPRVDback to top mRNA from alignment at L-elsbetiae_contig1478:23753..25647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1478.3466.1 ID=mRNA_L-elsbetiae_contig1478.3466.1|Name=mRNA_L-elsbetiae_contig1478.3466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1895bp|location=Sequence derived from alignment at L-elsbetiae_contig1478:23753..25647- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1478:23753..25647- >mRNA_L-elsbetiae_contig1478.3466.1 ID=mRNA_L-elsbetiae_contig1478.3466.1|Name=mRNA_L-elsbetiae_contig1478.3466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1200bp|location=Sequence derived from alignment at L-elsbetiae_contig1478:23753..25647- (Laminarionema elsbetiae ELsaHSoW15)back to top |