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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 295 |
| Cds size | 294 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815594.2929351-CDS-L-elsbetiae_contig14753:791..846 | 1622815594.2929351-CDS-L-elsbetiae_contig14753:791..846 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 792..846 - |
| 1691682979.8323872-CDS-L-elsbetiae_contig14753:791..846 | 1691682979.8323872-CDS-L-elsbetiae_contig14753:791..846 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 792..846 - |
| 1622815594.305428-CDS-L-elsbetiae_contig14753:1140..1197 | 1622815594.305428-CDS-L-elsbetiae_contig14753:1140..1197 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 1141..1197 - |
| 1691682979.842161-CDS-L-elsbetiae_contig14753:1140..1197 | 1691682979.842161-CDS-L-elsbetiae_contig14753:1140..1197 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 1141..1197 - |
| 1622815594.3186028-CDS-L-elsbetiae_contig14753:1388..1460 | 1622815594.3186028-CDS-L-elsbetiae_contig14753:1388..1460 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 1389..1460 - |
| 1691682979.8516479-CDS-L-elsbetiae_contig14753:1388..1460 | 1691682979.8516479-CDS-L-elsbetiae_contig14753:1388..1460 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 1389..1460 - |
| 1622815594.332399-CDS-L-elsbetiae_contig14753:2976..3048 | 1622815594.332399-CDS-L-elsbetiae_contig14753:2976..3048 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 2977..3048 - |
| 1691682979.861412-CDS-L-elsbetiae_contig14753:2976..3048 | 1691682979.861412-CDS-L-elsbetiae_contig14753:2976..3048 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 2977..3048 - |
| 1622815594.3425658-CDS-L-elsbetiae_contig14753:3924..3962 | 1622815594.3425658-CDS-L-elsbetiae_contig14753:3924..3962 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 3925..3962 - |
| 1691682979.8781383-CDS-L-elsbetiae_contig14753:3924..3962 | 1691682979.8781383-CDS-L-elsbetiae_contig14753:3924..3962 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14753 3925..3962 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14753.3454.1 >prot_L-elsbetiae_contig14753.3454.1 ID=prot_L-elsbetiae_contig14753.3454.1|Name=mRNA_L-elsbetiae_contig14753.3454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
EEIFSKPVNIHTLDLASNWLNELPAGLFDTLTKLEKLNLMKNDLEKLPDG
IFQTLTSLKNLWLTNNRELECIPPVPSTATRVSADRGVDTCGEWFKP* back to topmRNA from alignment at L-elsbetiae_contig14753:792..3962- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14753.3454.1 ID=mRNA_L-elsbetiae_contig14753.3454.1|Name=mRNA_L-elsbetiae_contig14753.3454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3171bp|location=Sequence derived from alignment at L-elsbetiae_contig14753:792..3962- (Laminarionema elsbetiae ELsaHSoW15)
GAAGAGATATTCTCCAAGCCTGTCAACATACACACTCTGTGAGTGCCCCC
CTTCGGTCGCTGTGTACATGGCTTGGGAGGACAATGGTAGAAACGTCGCA
AAAAAACATTTCTGCTAGACTCCGGAATCGCGATAAAGCAAGCAAGCTGA
ACATCCGACCTGTGAAGTTTGGAAGGTTGGCGACAGCACGTGCAGAATAT
TATGGCTGGCCTACGCCTTACTGGAACCCGGGATCATATTGATTGGAGAG
CTCGGATTACGTAGCTGGTACTTGCCGCACTTGTTTGAAGATCATGTGTG
CATCTGTGGGCCCCTTCTTTCGCCGAGCATGTGACATTTTATGCTATCCT
CAGCCGTAGTCTTCGGTTGCATCACCTTGCGATAACGGTGTAGCTGGAGC
GCAGTCATCTTCGATGATCTCACTCCCTGGAAACGTTAGCATGTGACTTG
ACGACCGCGGCGGGGGCGCGGTTGCGGTTGGTCCAAGACGTTTCCGGCGG
AAGTTGTTTTCAATGGGTGAAGGTAATGCTTTCGATGGGCGAAGGTAATG
CGCCGGGTCCGGTCCTTGGTTCTATGCATCGTTGGTTCGGGGCTTAAGCC
TTAACACATGGGCCTTCGACGCGCACCACGGTGAAAACGAAACCTATCGA
AAGTGGTGACGTTGTTCTCAGGACCGTTGCCAGTGACCCCATCCAATCAT
CTGACCCTCAGAGACAGCGTGCTGGCAACTTTTGCCGTCGCTACGGTCGG
TATCTATGGGTGGTGGAGCTCTGGACCGATACATCATTAGATATGTTGCT
TCCGCAAGGTCCTACCAACTTGGGGCTATCGAGGCTCGCAGGCTATCATG
CCCATGAAAACTGGGCGACAATGTTTCTTCTGACGATCTTGCTCGGCTGT
CGACAATCCCACAGGGATCTGGCCAGCAACTGGCTAAATGAGCTGCCTGC
CGGGCTATTTGATACTCTCACCAAGCTGGAAAAGCTGTAAGTCAACCCCT
TCGATTTCGAACCCTGTGTGGCCCCATATCTTGGGGTTGAAATCATCACG
CCTACGCACCCGCGAGACTATGTTACTGTCACTCCGGCGCAACTGCCTAC
CGTTTGTTGGTTTCTTACATTCGCCAAACAGCTAGCGGCTAGCCTGTGAA
GATTAAAGCTTGCCGTAAGTTGATGGACGACGCACGCATAGAACAGTAGT
TCGTCTATTGGGCAAGTTTGTTGAAGCGGCAGGCACAACAAGGTGTTGAC
GGTTCTTTAGGGTACGCGGAGATGTATCAGCATCCAGGAGTTGGTCAGCT
TTAGGAGCGGCCAATAAATCGAGTCTTTTCCCGCCCACCCACCCCTTTCT
TTCGAAGGTGGGGGGAGGAAGAGGAGACCCGACAGTAGCTAGAAACGAGT
TCTAGTTGGCGTAGGAGATGGTAGGATACCATTTGGAGACTTGGTCGACC
GAGCCTACTGTTTGCAGTACATAAGACTAGTTCCCTTCACCGGAGGATAG
GGAATGTTGGGTTGTTGCTACCGGGGGATAGAGAACCCTCGGTTGGTTGG
TGTTACGGAAGGAAGAGGTAGTGTTTAAGCAGAGAGGCAGAGACACGGTC
CAGTCGGCGCAGAAATATATCTGCGGGAACGTGGCTCTGCCGGCTGGTAT
TTTCCTCTTCCCTCGGGGGTCTCGGAAAATAGTTAAGGCAACTCGAAAGA
AAACAAAACAATAAATGCCTACTTATTATTTATGTACATTGACTTGGAGT
TGAATCTACCATGGTCGATCGACTGTTGAAGCTAACACACGATAATCGAT
GGAAGATGGTTTCCCCGCCCTGGTGAGGTGTTCTGGAGATAGGTTGGAGT
GCTGGCCTCGTCTGTCCCCCCGCCTGAGTACACGGCATTGTGTGCTGTCT
CCGGTTCTCTTCGGTTGCACAACAATTTTCTAATATGGTGTAGCTGGGTA
CAGTCATCTTGTGGATCTCACACACCAGACATTCCAGCACGCATGCATGC
GACATGAAGACCACGTCGGTATTGGGCGGGGTGGCGGGTATCTCACGTCT
TGTGGAAGGTATCCTGACCTGCTAGAGGGTGACGCCGAGGATGATGAATT
GTGCCGGATCTCTGGTTCCGTGCATCGTTGATTTTGGAGCCTGATCCTAT
TGCAGCCCTCCATCTCTGAGACGTAACACCGTGCGGACGAATAGCAGGCA
GGCCTCCCGAGTGTGGTAACGTTGCTCGCCGAACCGTTGCTCGTAACCCC
AGCCCGTCAACTCACCTGAAGAGTGAACATACATGGCTATCGGTTTTATG
GTACTCGATGGAATGTATTCGTCGAAGCCACTCACACGACCATCAAAATA
TGGCATTTTTCCCGCTTGCTGGAAGATGATGTCAACGTGTCCAAACGTTG
CCATCGCGGGTTATGTAGCGTGCCCGTCGAAAATTCGGTAACACATTTTA
TTTTACCGCCCATCTCCGGCATGCATGTATCATCCCCCCGATAACCCCAC
AGTAACCTGATGAAGAACGACCTGGAGAAGCTGCCTGACGGGATTTTCCA
AACTCTCACCTCGCTCAAGAACCTGTAAGTCCACCTGCGGGATTCCTGTG
TGAGTGTAGCTATCTGACACAAGGAACATCCATTAAATATAAGCCGTCAA
AGCCGAATTGGTTGGTTCCATGCCTCCCGTCACCGACGTCTCTGTTCGTT
TGTGTTGGTTTCTCTTTCCCTCTAACTGCGACCGCATTCATTCTTCGACG
CTGGCTGTACTTCAGGTGGCTGACGAACAACCGAGAGCTGGAGTGCATCC
CACCCGTGCCGTCGACCGCTACGTGAGGATGGTTTGAACTCCTTCCCATG
AGAGTGATGTCGGAACATCGACAGAGAATACACGAAACTATACTGCTGCA
CAGTAACCTCACGCGCCATGTATCGAGCTGATCGAGGAACTGTATCGTGC
TGCTCCCGCGTTTGTCACGGCCATGCAGTTACGCCCCGCCCGTGCGTTTC
GGCCTGAACGCGCCGGGTCGTCGTAAGCCTCTTTCGTGCACCGTCAGACA
ATGTAACTGCGCTGCCTCACCTTCTCCCTCGTTGCGCTCCTTGTCTTGAA
TCTGTACGTGTGGCAGTCGAGTCTCCGCCGATCGCGGTGTCGACACATGT
GGTGAGTGGTTCAAACCGTAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14753:792..3962- >mRNA_L-elsbetiae_contig14753.3454.1 ID=mRNA_L-elsbetiae_contig14753.3454.1|Name=mRNA_L-elsbetiae_contig14753.3454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=588bp|location=Sequence derived from alignment at L-elsbetiae_contig14753:792..3962- (Laminarionema elsbetiae ELsaHSoW15)
GAAGAGATATTCTCCAAGCCTGTCAACATACACACTCTGAAGAGATATTC
TCCAAGCCTGTCAACATACACACTCTGGATCTGGCCAGCAACTGGCTAAA
TGAGCTGCCTGCCGGGCTATTTGATACTCTCACCAAGCTGGAAAAGCTGG
ATCTGGCCAGCAACTGGCTAAATGAGCTGCCTGCCGGGCTATTTGATACT
CTCACCAAGCTGGAAAAGCTTAACCTGATGAAGAACGACCTGGAGAAGCT
GCCTGACGGGATTTTCCAAACTCTCACCTCGCTCAAGAACCTTAACCTGA
TGAAGAACGACCTGGAGAAGCTGCCTGACGGGATTTTCCAAACTCTCACC
TCGCTCAAGAACCTGTGGCTGACGAACAACCGAGAGCTGGAGTGCATCCC
ACCCGTGCCGTCGACCGCTACGTGGCTGACGAACAACCGAGAGCTGGAGT
GCATCCCACCCGTGCCGTCGACCGCTACTCGAGTCTCCGCCGATCGCGGT
GTCGACACATGTGGTGAGTGGTTCAAACCGTAGTCGAGTCTCCGCCGATC
GCGGTGTCGACACATGTGGTGAGTGGTTCAAACCGTAG back to top
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