mRNA_L-elsbetiae_contig1475.3451.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1475.3451.1
Unique NamemRNA_L-elsbetiae_contig1475.3451.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: D8LPN4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPN4_ECTSI)

HSP 1 Score: 802 bits (2071), Expect = 6.900e-279
Identity = 408/499 (81.76%), Postives = 435/499 (87.17%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGA----AASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGLSLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTVVPNRLSSVRELLHEQLRAWLPKFCVAVSNCDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQLDALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESVARK 1487
            ATMLLAN++P D HR FLAKK RELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLER+LGPMLRWAE+SPVSETMVKLLTFPSV GA    AA+YQTSAPSKWRLYSGLADWRFL+RVAENIFDRE SDSYASACADLLLEVVDRLSSDDNGELLLQPIG+CKELVDGLAAMAVD+GL LERRTDSARTLLGITQKAAD NIV+VNARTSMYDSQP TTVVPNRLSSVRELLHEQLR WLPKFCVAVSNCDD G G   +  + AVAHPGYEV+ PFTMLRYVLVG++ EIVNRDPQQLDAL VELWK LCSWFFRYPHNNLYHS+FYKLVFK LRCNNVGAL+M VSKGRLVA+LV+SH DGDK  AGNRG+VLQLCNAIRLQADTMPPTEFLR YL+SHEQWRNF+G LREATL+QQ PGLGFEV  +     +  A     LG          +   SAYAR+LGFEDDIVWLPDE V  +
Sbjct:  130 ATMLLANSEPSDNHRTFLAKKARELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERHLGPMLRWAEYSPVSETMVKLLTFPSVGGAVTGAAATYQTSAPSKWRLYSGLADWRFLLRVAENIFDRECSDSYASACADLLLEVVDRLSSDDNGELLLQPIGYCKELVDGLAAMAVDQGLPLERRTDSARTLLGITQKAADANIVFVNARTSMYDSQPTTTVVPNRLSSVRELLHEQLRTWLPKFCVAVSNCDDKGPGRQAEETSEAVAHPGYEVKRPFTMLRYVLVGIVYEIVNRDPQQLDALPVELWKALCSWFFRYPHNNLYHSIFYKLVFKVLRCNNVGALRMVVSKGRLVARLVDSHADGDK-SAGNRGFVLQLCNAIRLQADTMPPTEFLRNYLNSHEQWRNFLGSLREATLEQQRPGLGFEVPVVP----QYYANGPEALGQQPLPEDVG-IDHGSAYARALGFEDDIVWLPDEPVGTR 622          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: K3WQ60_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ60_GLOUD)

HSP 1 Score: 339 bits (869), Expect = 1.120e-99
Identity = 198/502 (39.44%), Postives = 288/502 (57.37%), Query Frame = 3
Query:    9 MLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDE--GLSLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHEQ--------LRAWLPKFCVAVSNCDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDES 1475
            MLL N+D  D    FL KK+  +T  +  +F  +A+G+L H C V+D+LLR Y D+V++ +GR+  ++ERY+G ML   EH+PVSE  + ++  P  A     Y +S   KW  +  L++W+ L+ +A++++  E S+ +    AD+ +E++DRL++D+NGELLLQP  +  EL+DGL   AVD   G +  +RT + + +  + QK+    +      TS Y S   T V  VPN+L+ +RE + E         LR  + K+    +   DL SG PL   A  V H GY V+ PFT  R  LV  ++E+V  +P  + +     +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N   L++ V K +LV  L+E H   D VGAGNRGY+LQ CNAIRLQA +  P  FLR +L SH  WR F   LR  T +    GLGF V ++      L+  S  +LG ++       +   S YARSLGF DD+ W  D++
Sbjct:  118 MLLTNDDTSDALITFLPKKSALITKCIFPIFQLNARGNLRHGCRVIDHLLRLYLDDVYDVVGRNAATVERYMGAMLHHIEHAPVSEVFLTMVCKPHSAALMRFYTSSPQKKWAFFRSLSEWKLLLVLAQHVYSTEYSELHNIGAADVFVELLDRLAADENGELLLQPAAYIPELLDGLVNAAVDRSSGRTFGQRTAAMKCVFRLLQKSTAEKVQ--GPPTSPYQSFGGTIVNLVPNQLAPLRERIFELAETHIGKLLRYLVDKYEDQQTIEMDLASGKPLPDGA--VRHTGYVVKVPFTEFRLTLVEALVEVVAHNPSIMGEHFDNHVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTDNQATLEVLVKKQKLVTTLIE-HFRHDGVGAGNRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRQFEPELRAITSEACVNGLGFHVPQMARQGGYLQKDSWQLLGTANDDDDESGIDHGSEYARSLGFIDDVAWPDDDA 614          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A5D6Y2H7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2H7_9STRA)

HSP 1 Score: 335 bits (859), Expect = 3.510e-98
Identity = 203/501 (40.52%), Postives = 286/501 (57.09%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGLSLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLH-------EQLRAWLPKFCVAVSNCD-DLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQLDA-LTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDE 1472
            ATMLL N+D  D    FL +K+  LT  +  VF   A+G+L HAC V+DYLLR Y D+V++ +GR   ++ RY+GPML + +H+ V+E  + ++  P  A     Y +S P KW  +  L+DW+ L+ +AE++  R  S+ + +  AD+ +E++DRL++DDNG LLLQP  +C EL+ GL   AVD G +  +RT + + +  + QK+    +      TS Y S   T V  V N+L+ +RE +        ++L  +L +      N + DL SG PL   A  V H GY V+ PFT  R  LV  ++EIV  +P++L A     +W+VL SWFF Y HNNLYH+ FY+L+F  LR +N  AL+  V K +LV  LVE +  G   GA NRGY+LQ CNAIRLQA +  P  FLR +L SH  WR F   LR  T      GLGF V ++       K  S  +L +    S    +   S +ARSLGF DD+ W PD+
Sbjct:  122 ATMLLTNDDASDALITFLPRKSALLTKCIFPVFQRDARGNLRHACRVIDYLLRMYLDDVYDVVGRDAATVARYMGPMLEFIDHAYVAEAFLTMVCKPHSAALMRYYASSPPKKWAFFRALSDWKLLLVLAEHVHSRRYSEKHNAGAADVFVELLDRLAADDNGGLLLQPAAYCPELLAGLVDAAVDPGRTPGQRTGAMKCVFRLLQKSTTEKVQ--GPPTSPYQSFGGTIVNLVANQLAPLRERVFALVETHMDKLLRYLVEKYEDQQNIEMDLQSGKPLPDGA--VRHTGYVVKVPFTEFRLTLVEALVEIVAHNPRKLGAHFDAGVWRVLVSWFFEYAHNNLYHAAFYQLLFIALRTDNQAALEALVKKQKLVTALVEHYRHGGP-GASNRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRAFEPELRAVTSSACVSGLGFTVPQMTRPGMFQKD-SWQVLASDEDESG---IDHGSEFARSLGFIDDVAW-PDD 612          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: G4YMH7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YMH7_PHYSP)

HSP 1 Score: 327 bits (839), Expect = 7.930e-96
Identity = 206/521 (39.54%), Postives = 293/521 (56.24%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAV---DEGLSLERRTDSART-----LLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVREL--------LHEQLRAWLPKFCVAVSNCD--DLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESH-VDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFE------LKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESVA 1481
            ATMLL N+D  D    FL  K++ LT  +  VF   AKG+L HAC V+D+LLR Y D+V++ LG++ ++++RY+G ML + EH+PV+E  + L+  P  A     Y ++ P KW  +  LA+W+ L+ +A ++   E  +++    AD+ +E++DRL++DDNG+LLLQP  +C EL++GL   AV   D    + +RT   RT     +  + QK+    +      TS Y S  AT V  VPN+L  +RE         L E LR  + K+ V+  N +  D  SG PL   A  V H  Y V+ PFT LR  LV  ++EIV  +P+ + +     +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL++ V K +LV  LVE +  DGD     N+GY+LQ+CNAIRLQA +  P  FLR +L SH  WR F   LR+ T      GLGF V + I   ++      L    +GI                S +ARSLGF DD+ W P++ VA
Sbjct:   77 ATMLLTNDDTSDALLTFLGDKSKLLTRCLFPVFQSDAKGNLRHACRVIDHLLRFYLDDVYDVLGKNADTVQRYMGAMLPYLEHAPVAELFLTLVCKPHSAAVMRFYSSTPPKKWAFFRALAEWKVLLVLASHVCSVEYGETHTIGAADVFVELLDRLAADDNGQLLLQPAAYCPELLEGLIRAAVEPEDPKAKIPQRTVGQRTAAMKCVFRLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLGPLREKIFGLVEQHLGELLRYLIQKY-VSQQNIEMPDEESGKPLPEGA--VRHTAYVVKVPFTELRLTLVEALVEIVAHNPRLMSEHFDANVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVEHYRADGDTTS--NKGYILQICNAIRLQAASQSPEAFLRNFLQSHTTWRGFEQELRDQTTLCCVNGLGFTVPQAIRPGYQKDSWQMLNEEQAGI-------------DHGSEFARSLGFVDDVAW-PEDDVA 576          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A662YFK0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFK0_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.250e-95
Identity = 199/518 (38.42%), Postives = 292/518 (56.37%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGL------SLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHEQLRAWLPKFCVAVSN---------CDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQLDA-LTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESH-VDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFE------LKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESVA 1481
            ATMLL N+D  D    FL  K++ LT  +  +F   A+G+L HAC VLD+LLR Y D+V++ LG S  +++RY+G ML + EH+PV+E  + L+  P  A     Y ++ P KW  +  LA+W+ L+ +A+++   +  +++    AD+ +E++DRL++D+NGELLLQP  +C EL++GL   AV   +      S+ +RT + + +  + QK+A   +      TS Y S  AT V  VPN+L+ +RE +++ +   L +    + +           D+ SG PL   A  V H  Y V+ PFT LR  LV  ++E+V  +PQ +     V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL++ V K +LV  LV+ +  DGD     NRGY+LQ CNAIRLQA +  P  FLR +L SH  WR+F   LR  T      GLGF V + I   ++      L    +GI                S +ARSLGF DD+ W P++ VA
Sbjct:  122 ATMLLTNDDSADALLTFLGAKSKLLTRCLFPIFQRDARGNLRHACRVLDHLLRLYLDDVYDVLGTSTATVQRYMGSMLPYLEHAPVAELFITLVCKPHSAALLRFYASTPPKKWAFFRALAEWKLLLVLADHVGSADYGEAHTIGAADVFVELLDRLAADENGELLLQPAAYCPELLEGLIRAAVAPDVDGRPPRSVGQRTAAIKCVFRLLQKSAREKVQ--GPPTSPYQSFGATIVNLVPNQLAPLRERIYKLVEQHLDELLRFLIHKYEHQQNIAMPDVASGQPLPEGA--VRHTAYVVKVPFTELRLTLVETLVELVAHNPQLMSQHFDVNVWRVLVAWFFEYAHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVDHYRADGD--ATSNRGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRSFEQELRSQTDLLCVNGLGFTVPQAIRPGYQKDSWQMLNEQQAGI-------------DHGSEFARSLGFVDDVAW-PEDDVA 619          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A2D4CJ12_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ12_PYTIN)

HSP 1 Score: 324 bits (831), Expect = 1.770e-94
Identity = 193/505 (38.22%), Postives = 292/505 (57.82%), Query Frame = 3
Query:    3 ATMLLANNDPPDT---HRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGLSLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVREL--------LHEQLRAWLPKFCVAVSNCDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVG-AGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDE 1472
            ATMLL N D  +       FLAKK++ +   V  +F  +++G+L H C V+D LLR + D+V++ +G +  +++RY+G ML++ EH+PV+E  + L+  P  A     Y +S   KW+L+  L++W+ L+ +AE+++  + S+ +    AD+ +E++DRLS+D+NG LLLQP+ HC +L++GL   AVD   S  +RT + R +L + Q++    +      TS Y S  AT V  VPN+L+S+RE         +H+ L+  + K+    +   DL SG PL   A  V H  Y V+ PFT  R  LV  ++EI+  +P ++ +   V +W+VL +WFF Y H NLYH+ FY+LVF  LR ++   L++ V K +LV  L+E H   D  G   N+GY+LQ CNAIRLQA + PP  FLR +LSSH  WR+F   LR+ T +    GLGF V + +      K     +      +     +   S YARSLGF DD+ W PD+
Sbjct:  103 ATMLLTNEDSSEAVIFAMPFLAKKSKLIAKCVFPIFQQNSRGNLRHGCRVIDRLLRLHLDDVYDVVGSTTATVKRYMGAMLQYIEHAPVAEVFLTLICKPHNAALMRYYTSSPQKKWQLFRALSEWKVLLVLAEHVYGTDYSEDHNIGAADVFIELLDRLSADENGALLLQPVAHCPQLLEGLIDTAVDNQRSQGQRTAAMRCVLRLLQRSTQEKVQ--GPPTSPYQSFGATIVNLVPNQLASLRENVFELAEQHMHKMLQYLVEKYQDQQNIEMDLTSGKPLPEGA--VRHTAYFVKVPFTEFRLTLVDALVEIIAHNPVKMTEHFDVNVWRVLVAWFFEYSHTNLYHAAFYQLVFIALRSDDQATLEILVKKLKLVTSLIE-HYRTDPAGKTSNKGYILQCCNAIRLQAASQPPDAFLRNFLSSHTTWRSFEAELRDHTSRLCVQGLGFNVPQAMRPMGYQKDTWQLM----DEVVDDGGIDHGSEYARSLGFVDDMAW-PDD 597          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: D0MYD5_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MYD5_PHYIT)

HSP 1 Score: 322 bits (826), Expect = 4.190e-94
Identity = 194/517 (37.52%), Postives = 292/517 (56.48%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGL--AAMAVDEGLSLE------RRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHE-------QLRAWLPKFCVAVSNCD--DLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFE------LKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDES 1475
            ATMLL N+D  D    FL  K++ LT  + + F   A+G+L HAC V+D+LLR Y ++V++ LG+  E+++RY+G M+ + EH+PV+E  + L+  P  A     Y ++ P KW  +  LA+W+ L+ +A ++   E  +++    AD+ +E++DRL++D+NG+LLLQP  +C EL++GL  AA+  +E  SL       +RT + + +  + QK+    +      TS Y S  AT V  VPN+L  +R+ ++E       ++  +L +  V+  N +  D  SG PL    +AV H  Y V+ PFT LR  LV  ++EI+  +P  + +     +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL++ V K +LV  LVE H   D     N+GY+LQ+CNAIRLQA +  P  FLR +L SH  WR F   LR+ T      GLGF V + I   ++      L    +GI                S +ARSLGF DD+ W  D++
Sbjct:   76 ATMLLTNDDTADALLTFLGDKSKLLTRCLFQAFQSDAQGNLRHACRVIDHLLRFYLNDVYDVLGKDAETVQRYMGAMIPYLEHAPVAELFLTLVCKPHSAAVMRFYASTPPKKWAFFRALAEWKMLLMLANHVCSTEYGETHTIGAADVFIELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVEPEENKSLTPQRTVGQRTAAMKCVFRLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLGPLRQKIYELVEQHLGEILKYLIQKYVSQQNIEMPDEESGKPLPE--TAVRHTAYVVKVPFTELRLTLVEALVEIMAHNPSLMSEHFDANVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVE-HYRADGESTSNKGYILQICNAIRLQAASQSPEAFLRNFLQSHTTWRGFEQELRDHTNLLCVNGLGFTVPQAIRPGYQKDTWQMLTEEEAGI-------------DHGSEFARSLGFVDDVAWPEDDA 574          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A3M6VW11_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VW11_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.140e-93
Identity = 197/512 (38.48%), Postives = 292/512 (57.03%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAV---DEGLSLER----RTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHE-------QLRAWLPKFCVAVSNCD--DLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESH-VDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESV 1478
            ATMLL N+D  +    FL  K++ LT  + +VF   AKG+L HAC V+D LLR Y D+V++ LG+   ++ RY+G ML + EH+PV+E  + L+  P  A A   Y ++ P KW  +  L++W+ L+ +A ++   E  +++    AD+ +E++DRL++D+NG+LLLQP  +C EL++GL   AV   D   +++R    RT + + +  + QK+    +      TS Y S  AT V  VPN+L  +RE ++E       +L  +L +  V   N +  +  SG PL   A  V H  Y V+ PFT LR +LV  ++E++  +P+ + +   V +W+VL +WFF Y HNNLYH+ FY+LVF  LR  N  ALK+ V K RL   LVE +  DGD     N+GY+LQ+CNAIRLQA +  P  FLR +L SH  WR F   LR+ T      GLGF V + +   ++    S  +L         H     S +ARSLGF DD+ W  D+++
Sbjct:  103 ATMLLTNDDTAEALLTFLGDKSKLLTRCLFRVFQCDAKGNLRHACRVIDQLLRFYLDDVYDVLGKDASTVARYMGAMLPYLEHAPVAELFLTLVCKPHSAAAMRFYTSTPPKKWAFFRALSEWKVLLVLANHVCSTEYGETHTVGAADVFVELLDRLAADENGQLLLQPAAYCPELLEGLIRAAVELEDSKKTMQRSVGQRTAAMKCVFRLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLGPLREKIYELVEQHLGELLKYLIQKYVIQQNIEMPNEESGKPLPEGA--VRHTAYVVKVPFTELRLMLVETLVEVMAHNPRLMSEHFDVNVWRVLVTWFFEYSHNNLYHAAFYQLVFIALRTENQQALKVLVKKLRLATLLVEHYRADGD--ATSNKGYILQICNAIRLQAASQSPDAFLRNFLQSHTTWRGFEKELRDRTNSLCVNGLGFTVPQAVRPGYQ--KGSWQMLNEEQDAGIDHG----SEFARSLGFMDDVAWPEDDAM 602          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A662Y9Z1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y9Z1_9STRA)

HSP 1 Score: 328 bits (842), Expect = 2.440e-93
Identity = 198/517 (38.30%), Postives = 290/517 (56.09%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGL------SLERRTDSARTLLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHEQLRAWLPKFCVAVSN---------CDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQLDA-LTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFE------LKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESVA 1481
            ATMLL N+D  D    FL  K++ LT  +  +F   A+G+L HAC VLD+LLR Y D+V++ LG S  +++RY+G ML + EH+PV+E  + L+  P  A     Y ++ P KW  +  LA+W+ L+ +AE++   +  +++    AD+ +E++DRL++D+NGELLLQP  +C EL++GL   AV   +      S+ +RT + + +  + QK+A   +      TS Y S  AT V  VPN+L+ +RE +++ +   L +    + +           D+ SG PL   A  V H  Y V+ PFT LR  LV  ++E+V  +PQ +     V +W+VL +WFF Y HNNLYH+ FY+LVF  LR +N  AL++ V K +LV  LV+ H   D     N+GY+LQ CNAIRLQA +  P  FLR +L SH  WR+F   LR  T      GLGF V + I   ++      L    +GI                S +ARSLGF DD+ W P++ VA
Sbjct:  370 ATMLLTNDDSADALLTFLGAKSKLLTRCLFPIFQRDARGNLRHACRVLDHLLRLYLDDVYDVLGASTATVQRYMGSMLPYLEHAPVAELFITLVCKPHSAALLRFYASTPPKKWAFFRALAEWKLLLVLAEHVGSADYGEAHTIGAADVFVELLDRLAADENGELLLQPAAYCPELLEGLIRAAVAPDVDGRPPRSVGQRTAAIKCVFRLLQKSAREKVQ--GPPTSPYQSFGATIVNLVPNQLAPLRERIYKLVEQHLDELLRFLIHKYEHQQNIAMPDVASGQPLPEGA--VRHTAYVVKVPFTELRLTLVETLVELVAHNPQLMSQHFDVNVWRVLVAWFFEYAHNNLYHAAFYQLVFIALRTDNQQALEVLVKKLKLVTLLVD-HYRADGNATSNKGYILQCCNAIRLQAASQSPDAFLRNFLQSHTTWRSFEQELRSQTDLLCVNGLGFTVPQTIRPGYQKDSWQMLNEQQAGI-------------DHGSEFARSLGFVDDVAW-PEDDVA 867          
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Match: A0A484E7F6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7F6_BRELC)

HSP 1 Score: 319 bits (818), Expect = 1.030e-92
Identity = 191/511 (37.38%), Postives = 292/511 (57.14%), Query Frame = 3
Query:    3 ATMLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLLRSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGAAASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLEVVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGLSLERRTDSART-----LLGITQKAADPNIVYVNARTSMYDSQPATTV--VPNRLSSVRELLHE-------QLRAWLPKFCVAVSNCD--DLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEIVNRDPQQL-DALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVGALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPTEFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLI---NADFELKAASSGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDES 1475
            ATM+L N+D  D    FL  K++ LT  + +VF   +KGSL HAC V+D LLRSY D+V++ LG+   +++RY+G +L +  H+PV+E  + L+  P  A     Y ++ P KW  +  LA+W+ L+ +A+++ + E  ++++   AD+ +E++DRL++D+NG+LLL P  +C EL++GL   AV+  +    RT   RT     +  + QK+    +      TS Y S  AT V  VPN+LS +R+ ++E       ++  +L +  V+  N    +  SG PL    +A+ H  Y V+ PFT LR  LV  ++EI+  +P  + +   V +W+VL +WFF Y HNNLYH+ F++LVF  LR +N  ALK+ V K ++V  LVE H   D +   N+GY+LQ+CNAIRLQA +  P  FLR +L SH  WR F   LRE T +    GLGF V + +   N     +  +   +G          +   S +ARSLGF DD+ W  D++
Sbjct:   92 ATMMLTNDDTADALLTFLGDKSKLLTRCLFQVFHRDSKGSLRHACRVIDRLLRSYLDDVYDVLGKDARTVQRYMGALLPYLGHAPVAELFLTLVCKPHSAALRQLYISTPPKKWAFFRALAEWKVLLVLAKHVCNNEYGETHSIGAADVFVELLDRLAADENGQLLLLPTSYCPELLEGLIQAAVEPEVHTSVRTVGQRTAAMKCVFQLLQKSTLEKVQ--GPPTSPYQSFGATIVNLVPNQLSPLRKKIYEIVERHLGEILEYLIQRYVSQQNIKMPNKDSGKPLPD--TAIRHTAYVVKVPFTELRLTLVEALVEIMAHNPGLMSEHFDVNVWRVLVTWFFEYSHNNLYHAAFFQLVFIALRTDNQQALKVLVKKLKVVTLLVE-HYHADGICTSNKGYILQICNAIRLQAASQSPDAFLRNFLQSHTSWRKFEQELREQTSRLCVAGLGFTVPRAVRPGNRKDTWQMLNEERVG----------IDHGSEFARSLGFVDDVAWPEDDA 587          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1475.3451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPN4_ECTSI6.900e-27981.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K3WQ60_GLOUD1.120e-9939.44Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y2H7_9STRA3.510e-9840.52Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4YMH7_PHYSP7.930e-9639.54Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A662YFK0_9STRA1.250e-9538.42Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A2D4CJ12_PYTIN1.770e-9438.22Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
D0MYD5_PHYIT4.190e-9437.52Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A3M6VW11_9STRA1.140e-9338.48Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662Y9Z1_9STRA2.440e-9338.30Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A484E7F6_BRELC1.030e-9237.38Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1475contigL-elsbetiae_contig1475:2879..8515 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score801.6
Seed ortholog evalue2.3e-229
Seed eggNOG ortholog2880.D8LPN4
Hectar predicted targeting categoryother localisation
EggNOG OGs2C50Y@1,2QTHY@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size3101
Cds size1665
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1475.3451.1prot_L-elsbetiae_contig1475.3451.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1475 2887..7087 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.907181-UTR-L-elsbetiae_contig1475:2878..28861622815593.907181-UTR-L-elsbetiae_contig1475:2878..2886Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1475 2879..2886 +
1691682979.5791583-UTR-L-elsbetiae_contig1475:2878..28861691682979.5791583-UTR-L-elsbetiae_contig1475:2878..2886Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1475 2879..2886 +
1622815594.0322335-UTR-L-elsbetiae_contig1475:7087..85151622815594.0322335-UTR-L-elsbetiae_contig1475:7087..8515Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1475 7088..8515 +
1691682979.678827-UTR-L-elsbetiae_contig1475:7087..85151691682979.678827-UTR-L-elsbetiae_contig1475:7087..8515Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1475 7088..8515 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.920515-CDS-L-elsbetiae_contig1475:2886..30541622815593.920515-CDS-L-elsbetiae_contig1475:2886..3054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 2887..3054 +
1691682979.5944257-CDS-L-elsbetiae_contig1475:2886..30541691682979.5944257-CDS-L-elsbetiae_contig1475:2886..3054Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 2887..3054 +
1622815593.9340444-CDS-L-elsbetiae_contig1475:3220..33671622815593.9340444-CDS-L-elsbetiae_contig1475:3220..3367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 3221..3367 +
1691682979.6037314-CDS-L-elsbetiae_contig1475:3220..33671691682979.6037314-CDS-L-elsbetiae_contig1475:3220..3367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 3221..3367 +
1622815593.9447749-CDS-L-elsbetiae_contig1475:4662..47971622815593.9447749-CDS-L-elsbetiae_contig1475:4662..4797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 4663..4797 +
1691682979.6119776-CDS-L-elsbetiae_contig1475:4662..47971691682979.6119776-CDS-L-elsbetiae_contig1475:4662..4797Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 4663..4797 +
1622815593.9568172-CDS-L-elsbetiae_contig1475:4981..51851622815593.9568172-CDS-L-elsbetiae_contig1475:4981..5185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 4982..5185 +
1691682979.6202776-CDS-L-elsbetiae_contig1475:4981..51851691682979.6202776-CDS-L-elsbetiae_contig1475:4981..5185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 4982..5185 +
1622815593.9686337-CDS-L-elsbetiae_contig1475:5340..54961622815593.9686337-CDS-L-elsbetiae_contig1475:5340..5496Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 5341..5496 +
1691682979.6289456-CDS-L-elsbetiae_contig1475:5340..54961691682979.6289456-CDS-L-elsbetiae_contig1475:5340..5496Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 5341..5496 +
1622815593.981929-CDS-L-elsbetiae_contig1475:5711..60281622815593.981929-CDS-L-elsbetiae_contig1475:5711..6028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 5712..6028 +
1691682979.638577-CDS-L-elsbetiae_contig1475:5711..60281691682979.638577-CDS-L-elsbetiae_contig1475:5711..6028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 5712..6028 +
1622815593.9966593-CDS-L-elsbetiae_contig1475:6166..64451622815593.9966593-CDS-L-elsbetiae_contig1475:6166..6445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 6167..6445 +
1691682979.6478145-CDS-L-elsbetiae_contig1475:6166..64451691682979.6478145-CDS-L-elsbetiae_contig1475:6166..6445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 6167..6445 +
1622815594.0125227-CDS-L-elsbetiae_contig1475:6828..70871622815594.0125227-CDS-L-elsbetiae_contig1475:6828..7087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 6829..7087 +
1691682979.6659489-CDS-L-elsbetiae_contig1475:6828..70871691682979.6659489-CDS-L-elsbetiae_contig1475:6828..7087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1475 6829..7087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1475.3451.1

>prot_L-elsbetiae_contig1475.3451.1 ID=prot_L-elsbetiae_contig1475.3451.1|Name=mRNA_L-elsbetiae_contig1475.3451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=555bp
MLLANNDPPDTHRKFLAKKTRELTAAVLKVFWPSAKGSLHHACCVLDYLL
RSYADEVFETLGRSRESLERYLGPMLRWAEHSPVSETMVKLLTFPSVAGA
AASYQTSAPSKWRLYSGLADWRFLMRVAENIFDREGSDSYASACADLLLE
VVDRLSSDDNGELLLQPIGHCKELVDGLAAMAVDEGLSLERRTDSARTLL
GITQKAADPNIVYVNARTSMYDSQPATTVVPNRLSSVRELLHEQLRAWLP
KFCVAVSNCDDLGSGMPLDSNASAVAHPGYEVEHPFTMLRYVLVGMILEI
VNRDPQQLDALTVELWKVLCSWFFRYPHNNLYHSVFYKLVFKTLRCNNVG
ALKMAVSKGRLVAQLVESHVDGDKVGAGNRGYVLQLCNAIRLQADTMPPT
EFLRTYLSSHEQWRNFVGVLREATLQQQTPGLGFEVSKLINADFELKAAS
SGILGASSCISSCHQLRRPSAYARSLGFEDDIVWLPDESVARKKKKKKKK
KKKKKKGGSGGEEGRQEGDEEVEEGDGDVCNADEVDLEDLVDEDTSAWVD
PPDA*
back to top

mRNA from alignment at L-elsbetiae_contig1475:2879..8515+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1475.3451.1 ID=mRNA_L-elsbetiae_contig1475.3451.1|Name=mRNA_L-elsbetiae_contig1475.3451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5637bp|location=Sequence derived from alignment at L-elsbetiae_contig1475:2879..8515+ (Laminarionema elsbetiae ELsaHSoW15)
GGGCGACCATGCTACTGGCCAACAACGACCCACCGGATACCCACAGAAAA TTCTTGGCGAAGAAGACACGGGAACTTACCGCTGCGGTTCTAAAGGTGTT TTGGCCAAGTGCGAAGGGGAGTTTGCACCACGCATGTTGCGTGCTGGACT ACCTTCTACGGTCTTATGCTGACGAGGTAAATACGAGACTATTTTGAGTC GGAAAAAATGAAATGGTGCAGCTTGTTCGTTGCCAACCTCATCCTCTTCA CGTCCACCCAACCTTATTGATCCGAAAGTGGGAAGCAACGTTCTAGTAAC AAGCCATTTTACCGCGACGCTTTATGTTTTCGTGTTCCGTAGGTTTTCGA GACTTTGGGTCGGTCTCGAGAATCGTTAGAACGATATCTCGGGCCTATGC TTCGGTGGGCGGAGCACTCGCCAGTGTCTGAGACCATGGTGAAACTCCTC ACGTTTCCATCGGTGGCAGGTGCTGCTGCCTCATACCAGGTGCGCATAGA GCCGGTGGTTTTGTCTGTTTGGAGGCACCCGCGCCTTTTTGGCGAGTACC CCCACACGCGCTCCACGAAACTTGCAAATATTGCGGATCTATCCACAAGG CTGTTTCAAACTGAACAAAACGGCCGTCAAAGAGTGCGGTCCCCGACCGC AATATTCTGAGATCGCGCTGTCGTTGAGGCCGATTATTGACGACAGCCTT TTCTAATATTATAATTCCGAGCACGTTCTCGGCGACGTCCGAAAAATGAA TCGAAGCCTCTAAACTAAACGGCTAAATACAGGGGTTATTTCCATATGCC ATAACCGCGTGCATACATTTCCCTTGCCTGAAAACCTCTCCTAAGAAGTG CAGACACGGAAGAAAGGAACACCTCAAACAAGAGCAATTACATGGCTATC GAAATCACCGCTGCACGTCACATTTTAAGCCGGTTCGGGCAGAGTACAGC AGCGGACAAACGGGGGCAGATTTTGTTCTGCTTACTGTCGGTCAATTTTT TGTCCGTCGACTACGCTCCTTGCGGCACTTGTTGACGCATCAATGCAGCA CCAAGCCCGTATGTAGCGCTGGTATTGCCGACGGCCGGTGTCATGTAGAC CGCCGTTTAGAAAGAAGCAGGACCTCGGAGTCCTTCAAGCTCTGGTAGTG TGTTGAGGCGTGGACCGGACTGTGGACCGGCGGCAAACACCCAGCCGTAA CCAGTTAGTCTTACGTAAAAAAACAAACGCTCGCGTGCCACATGCCATCC TTGCGTAGGCAGCAATAGATCACCAATAAGGCCATAGCGCCGGCATCGCC TATGGCCAGTGTCATGTGGACCAATGTTTCAAGAAAGCAGACCTCGGAGG CATTCGAGCCATCACAAAGAATGATGGCGTGAACTGAAATTTAGGAGCTG TGTTTGAACCCCAACTCGACAACAACTGCTGCGCAAATCAACGTGATGAA AGGTGGAGGAGAGGCTTGAACTCTGGGCTGGGGGGACTGTAGTCAGCGAT CCTACTTGTTTTGTGCCTCGCAAGTGCTCACGCGGCATGCACGGGGGTTG TTTCCGAAAAAATGTGCACGTTTTCGGAGTCTCAAAAAATGAAGCGTCGG AGATAGATAGAGGGCTATTTATTTTTAGACGAGCCGGAAAGAGATTCAGA GAAGTCCCAAAAGTTCAGCCGATTTCGGAATCTCCGAGAAATATTTGTCG TTACTAGTGGGCCTAACTCAGCCCATCCATGCCACCCTCTTCTCTCGCTC GCTCCTTGTCGACTTTCCTTGACTGGTGGCACAGACGTCAGCACCTAGCA AATGGAGATTATACTCTGGGCTTGCAGACTGGCGATTTCTCATGAGGGTG GCGGAGAACATCTTTGATCGAGAGGGCTCGGATTCGTACGCCTCTGCTTG CGCAGACCTACTTCTTGAGGTATGCGGGCCTAATGGCACAAGAGGTTTCA TTCGCCGCTTGAGTCGCCTTCTACCGCCGCACGTACATTACACGTACTGC CATAGGGCTGCGTTATGTGCGCGGTCATTCTGCTAATATGTTTCTGTGTT AAATATCGGTGCCTCGTATCGTCGCTCTTCTGTGCATGCATATACATGCA TAGGTTGTGGATCGACTTTCATCCGATGACAATGGGGAGCTGCTGCTTCA ACCGATTGGACACTGCAAGGAACTGGTTGACGGACTGGCAGCCATGGCGG TCGATGAAGGTCTATCGTTGGAGAGACGAACGGATAGCGCACGGACTTTG CTGGGAATAACGCAGAAGGCTGCAGACCCAAATATCGTCTACGTGAACGC ACGCACGGTACGAGCTCTTGCTGACTGCCACGTTTTAAGCAGGATCATTA CAACGGGCTTTGTGTGGCGTACTCTTGTTGATAGCCGCGACCATGCAAAC ACCCCAGTGTGCAGCTCCATTTACTATGCTGCTGCCGTCGTGCGTGCCCT TGCCGGTCGTAGTCAATGTACGACTCACAGCCAGCGACTACAGTGGTGCC TAATCGATTGAGCTCTGTGCGGGAGCTTCTACACGAGCAGCTGCGAGCCT GGCTGCCTAAATTTTGCGTCGCAGTCTCCAACTGTGATGACCTGGGTTCA GGTATGCCACTCGATAGTGTTTCCAACCTAGCCCAAGCCTCGCTCAGGTT CAGATGCTTTCGACCAAATCTCGATGAACTTCGTCGTTGTTCCGCCGGAC ACTTTATTCATCGTTTCTTCCGGGCGAGTGGTCGCGCAATTGTGCGCTTT CGTGGCCTGTCAATTGTGAAATATCCGAAGCGAGTTATGAAGCTGCCAGC ATCCGGTTGCCAACAGGTGGAGAAATGAATGAGAACGCGTCCGCAGTTGC GCACCCGGGGTACGAGGTGGAGCACCCTTTCACGATGCTCCGGTACGTCC TGGTCGGTATGATACTGGAGATTGTAAATCGAGATCCTCAGCAGCTGGAT GCCTTGACTGTGGAGCTTTGGAAGGTGCTGTGCAGCTGGTTCTTCCGATA TCCCCACAACAACCTGTACCACAGCGTCTTTTACAAGCTTGTTTTCAAGA CGCTCAGATGCAACAACGTCGGGGCGTTGAAAATGGCGGTGTCCAAGGGG CGGCTGGTGGCGCAACTGGTGGAATCCCACGTGGATGGCGACAAGGTGGG GTCCTTTCTAGTACTGTTCCTCATTTAGCCCAATCCAGGGAAGTGCGCAA TATACGCAGCAGATATTTTAGATGACTGCACCAATATGTTACCTCACGCT TACCATTGCCACATGCAACACACGGTTGTCCTTCAGAGTGCTGGCAACCG GGGATACGTGCTGCAGCTCTGCAACGCCATCCGTCTCCAGGCAGATACAA TGCCTCCAACGGAGTTCCTTCGGACGTACCTGAGCTCCCATGAGCAGTGG CGCAATTTCGTGGGAGTCCTCCGAGAAGCCACACTCCAGCAACAAACCCC AGGTCTAGGCTTTGAGGTAAGCAAACTGATTAATGCAGACTTTGAGCTGA AAGCCGCTTCGTCAGGCATACTAGGTGCCAGTTCGTGCATTTCATCTTGC CACCAACTTCGGCGCCCGTCGACAAGAACATGTGCACAACGCCAACCATT TGTTGTATCCCATGTTTCGGTGCTTCCTCGGTTGTGTCAGGTGCCCGTGG TCCCTCGGTATTACTCGAACGGCCCGGAGAATCTTGGAAATCAACAGCCC CCAGAAGATGGGGGAATCGACCATGGGTGAGGCTGTTAGTAGACGTGTCT AGTTACACACGGCTGTTATGATTTGTTAACATCTGTATATTCCGCAGGGC TGCACAAAGTGGTCTCCGCGTATCGTATGCATTCGGATGTTACACCACGA TTTCTGTTCTGCAGCATAATTGGCAGAAATTGGATCCGTCCCGAAAGAGC GAACTTATTTGACTGAACAGCTAAGTTGCCTTTACTGTTCCAATCTACAG ATCTGCGTACGCCAGATCGCTAGGCTTTGAAGACGACATCGTGTGGTTAC CCGATGAGTCGGTGGCGCGCAAGAAGAAAAAGAAAAAGAAAAAGAAAAAG AAGAAGAAGAAGGGTGGTAGTGGGGGTGAAGAAGGAAGACAGGAAGGAGA CGAAGAAGTGGAGGAAGGAGACGGCGATGTTTGCAACGCCGACGAGGTAG ACCTAGAGGACCTTGTGGATGAAGACACTTCTGCTTGGGTTGATCCACCA GATGCGTGAGGATGTTTTAGTTCACATGTAGATTGCTGTTAAAAAACGTT TCCAAAGTTGTACTACTATCTTCGCGCCTTCGTACGCTCCTCGAATCTTT CGCCGCTTGCCGATATTTCCTTTTGCCGTTTTGCCGGCCTTGTGAAGACA GATCGCGGGTCCTTGGGTAGATAGTCTGTTGTCTTTTGCGCGTAAATAGT GTTGGTTAGATTCCCAGCACGGGGAAGGCAAATACGTACATATAATAGAT GTTTTGTTTTCGAAAATCTGTTTTGGAGCATATCACATGCACGATGGGAC TTGGCTAGAAAAACTACCTGTAGGTGAAAATCCGTGACATCACGACTTGA TGATGTGCACGAAAGTGCTGCAGACGTGCCTGCTACAATATGAGAGCTGC AATCGCAAATACCTTGTCAATGGGGTTCTCGAGCTGGCGTGCCGTTTTTC TTCTCAAGACAGAACCAACCACCACTGGCGGGGGTTGCTTGCTTGTACAT TTCCCCCAGAGCCATCGCGTTGCGTGCGTGCACGTGTGTGTGCGATCTCC CGGCTTTCACCCTCACAATCGACCGACTGAAACGCAGTAAGCTCCTCGCC TCTGTTGGAAAGCGGGTGTGTGGGCACCACTGGGTACATGACGTAAAGCG GAATTATGTCCTGATTTTAGGTCAACGCGCTCTATTGTACGGTTCACCGT GAAAACGAAATATGGTAACAGGGTCAAAATTTAAATGTCTTCTTGAGACT CGTGTTTGATGTCGAATTTGTCTTTCAATAATCTCAACCGAAGCTTGTTT TTATTTTGTTTTTGCTCTTTACATTTATTTCCAGTGCTCGATGGGCTTCT TGTCACGAGGATATCTTGCCAGAGTACTGAACCGTGGTCACACAGAAGGG CTCCTTTTCCCCAAGGGCCCCATTACCCCCCTATGCCGTGCTCGCCTAAG ATTTTTGTCGCGAGAATGTTCAGCCGTCCCTTCCCTCGTCGACAGTGAGG TCGAAGTTTGTGTACACACGCAAGCGCTATTCACTGACAGGGATGGAAGC GATAGAAAAAAATCACTTCGCAAGAAAAAGTCGCTTCCACCGGGTTCGAA CCCATGACCTGCCTGCTAGAAGGTGTTTGGGGGGGAAGCTTGTTTAAAAG TCAAACGAGGAAAACTGGTCTCTGGTTGCAAACCAACTGTTTCCATATCG TTCGCGCGGTGAGGTGGCTTGGACCCCTTCGGATGTTTCGGTGGGAATTG TGGCGGTGGACCCTTTGGCTGGCGCCGCAGTTGGTAGAAACGCTGAAAAA CCTTCATTTTGGCCTGCAAGGAATTAACTGGAGATGTAGCGGACTCGGGG CGGGATTTTTGCTTTCCAGGCCGGGGTCGTGCAGGGTGTAGTCCTGCTAC AAGCTCTTTTCCTACGGCAGTCACTATTGAATCCTGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1475:2879..8515+

>mRNA_L-elsbetiae_contig1475.3451.1 ID=mRNA_L-elsbetiae_contig1475.3451.1|Name=mRNA_L-elsbetiae_contig1475.3451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3330bp|location=Sequence derived from alignment at L-elsbetiae_contig1475:2879..8515+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTACTGGCCAACAACGACCCACCGGATACCCACAGAAAATTCTTGGC
GAAGAAGACACGGGAACTTACCGCTGCGGTTCTAAAGGTGTTTTGGCCAA
GTGCGAAGGGGAGTTTGCACCACGCATGTTGCGTGCTGGACTACCTTCTA
CGGTCTTATGCTGACGAGATGCTACTGGCCAACAACGACCCACCGGATAC
CCACAGAAAATTCTTGGCGAAGAAGACACGGGAACTTACCGCTGCGGTTC
TAAAGGTGTTTTGGCCAAGTGCGAAGGGGAGTTTGCACCACGCATGTTGC
GTGCTGGACTACCTTCTACGGTCTTATGCTGACGAGGTTTTCGAGACTTT
GGGTCGGTCTCGAGAATCGTTAGAACGATATCTCGGGCCTATGCTTCGGT
GGGCGGAGCACTCGCCAGTGTCTGAGACCATGGTGAAACTCCTCACGTTT
CCATCGGTGGCAGGTGCTGCTGCCTCATACCAGGTTTTCGAGACTTTGGG
TCGGTCTCGAGAATCGTTAGAACGATATCTCGGGCCTATGCTTCGGTGGG
CGGAGCACTCGCCAGTGTCTGAGACCATGGTGAAACTCCTCACGTTTCCA
TCGGTGGCAGGTGCTGCTGCCTCATACCAGACGTCAGCACCTAGCAAATG
GAGATTATACTCTGGGCTTGCAGACTGGCGATTTCTCATGAGGGTGGCGG
AGAACATCTTTGATCGAGAGGGCTCGGATTCGTACGCCTCTGCTTGCGCA
GACCTACTTCTTGAGACGTCAGCACCTAGCAAATGGAGATTATACTCTGG
GCTTGCAGACTGGCGATTTCTCATGAGGGTGGCGGAGAACATCTTTGATC
GAGAGGGCTCGGATTCGTACGCCTCTGCTTGCGCAGACCTACTTCTTGAG
GTTGTGGATCGACTTTCATCCGATGACAATGGGGAGCTGCTGCTTCAACC
GATTGGACACTGCAAGGAACTGGTTGACGGACTGGCAGCCATGGCGGTCG
ATGAAGGTCTATCGTTGGAGAGACGAACGGATAGCGCACGGACTTTGCTG
GGAATAACGCAGAAGGCTGCAGACCCAAATATCGTCTACGTGAACGCACG
CACGGTTGTGGATCGACTTTCATCCGATGACAATGGGGAGCTGCTGCTTC
AACCGATTGGACACTGCAAGGAACTGGTTGACGGACTGGCAGCCATGGCG
GTCGATGAAGGTCTATCGTTGGAGAGACGAACGGATAGCGCACGGACTTT
GCTGGGAATAACGCAGAAGGCTGCAGACCCAAATATCGTCTACGTGAACG
CACGCACGTCAATGTACGACTCACAGCCAGCGACTACAGTGGTGCCTAAT
CGATTGAGCTCTGTGCGGGAGCTTCTACACGAGCAGCTGCGAGCCTGGCT
GCCTAAATTTTGCGTCGCAGTCTCCAACTGTGATGACCTGGGTTCAGGTA
TGCCACTCGATAGTTCAATGTACGACTCACAGCCAGCGACTACAGTGGTG
CCTAATCGATTGAGCTCTGTGCGGGAGCTTCTACACGAGCAGCTGCGAGC
CTGGCTGCCTAAATTTTGCGTCGCAGTCTCCAACTGTGATGACCTGGGTT
CAGGTATGCCACTCGATAGTAACGCGTCCGCAGTTGCGCACCCGGGGTAC
GAGGTGGAGCACCCTTTCACGATGCTCCGGTACGTCCTGGTCGGTATGAT
ACTGGAGATTGTAAATCGAGATCCTCAGCAGCTGGATGCCTTGACTGTGG
AGCTTTGGAAGGTGCTGTGCAGCTGGTTCTTCCGATATCCCCACAACAAC
CTGTACCACAGCGTCTTTTACAAGCTTGTTTTCAAGACGCTCAGATGCAA
CAACGTCGGGGCGTTGAAAATGGCGGTGTCCAAGGGGCGGCTGGTGGCGC
AACTGGTGGAATCCCACGTGGATGGCGACAAGGTGGGAACGCGTCCGCAG
TTGCGCACCCGGGGTACGAGGTGGAGCACCCTTTCACGATGCTCCGGTAC
GTCCTGGTCGGTATGATACTGGAGATTGTAAATCGAGATCCTCAGCAGCT
GGATGCCTTGACTGTGGAGCTTTGGAAGGTGCTGTGCAGCTGGTTCTTCC
GATATCCCCACAACAACCTGTACCACAGCGTCTTTTACAAGCTTGTTTTC
AAGACGCTCAGATGCAACAACGTCGGGGCGTTGAAAATGGCGGTGTCCAA
GGGGCGGCTGGTGGCGCAACTGGTGGAATCCCACGTGGATGGCGACAAGG
TGGGTGCTGGCAACCGGGGATACGTGCTGCAGCTCTGCAACGCCATCCGT
CTCCAGGCAGATACAATGCCTCCAACGGAGTTCCTTCGGACGTACCTGAG
CTCCCATGAGCAGTGGCGCAATTTCGTGGGAGTCCTCCGAGAAGCCACAC
TCCAGCAACAAACCCCAGGTCTAGGCTTTGAGGTAAGCAAACTGATTAAT
GCAGACTTTGAGCTGAAAGCCGCTTCGTCAGGCATACTAGGTGCCAGTTC
GTGCATTTCATCTTGCCACCAACTTCGGCGCCCTGCTGGCAACCGGGGAT
ACGTGCTGCAGCTCTGCAACGCCATCCGTCTCCAGGCAGATACAATGCCT
CCAACGGAGTTCCTTCGGACGTACCTGAGCTCCCATGAGCAGTGGCGCAA
TTTCGTGGGAGTCCTCCGAGAAGCCACACTCCAGCAACAAACCCCAGGTC
TAGGCTTTGAGGTAAGCAAACTGATTAATGCAGACTTTGAGCTGAAAGCC
GCTTCGTCAGGCATACTAGGTGCCAGTTCGTGCATTTCATCTTGCCACCA
ACTTCGGCGCCCATCTGCGTACGCCAGATCGCTAGGCTTTGAAGACGACA
TCGTGTGGTTACCCGATGAGTCGGTGGCGCGCAAGAAGAAAAAGAAAAAG
AAAAAGAAAAAGAAGAAGAAGAAGGGTGGTAGTGGGGGTGAAGAAGGAAG
ACAGGAAGGAGACGAAGAAGTGGAGGAAGGAGACGGCGATGTTTGCAACG
CCGACGAGGTAGACCTAGAGGACCTTGTGGATGAAGACACTTCTGCTTGG
GTTGATCCACCAGATGCGTGAATCTGCGTACGCCAGATCGCTAGGCTTTG
AAGACGACATCGTGTGGTTACCCGATGAGTCGGTGGCGCGCAAGAAGAAA
AAGAAAAAGAAAAAGAAAAAGAAGAAGAAGAAGGGTGGTAGTGGGGGTGA
AGAAGGAAGACAGGAAGGAGACGAAGAAGTGGAGGAAGGAGACGGCGATG
TTTGCAACGCCGACGAGGTAGACCTAGAGGACCTTGTGGATGAAGACACT
TCTGCTTGGGTTGATCCACCAGATGCGTGA
back to top