mRNA_L-elsbetiae_contig14723.3432.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI) HSP 1 Score: 354 bits (908), Expect = 2.630e-118 Identity = 182/280 (65.00%), Postives = 230/280 (82.14%), Query Frame = 1 Query: 76 SFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLLMFG 915 SFVS IPTALRLGAGCGISV++S+LG+R++G+L+ +SF+L+ TWQ VG IITAAC K A P + +KW+ ++ P V+T +YAV DRSKF+GYSLA++ PLSNWG G+FG ++F L P ++WF++ R +S+ IN+SSILL+LID+VCLE +R+KVKS+ EVDFSNAIGGT+KFR MAC IP MS VGN MGVTTQA FVQSMI+VFAGG++GLS+VVTG L +++TV+WPLLP+L P HVSGALTVVISLRFFTV++MIDV P NLLMFG Sbjct: 94 SFVSLIPTALRLGAGCGISVLVSVLGMRNIGVLVNNSFSLQAFTWQIIVGFGIITAACGKAA-PEKQLKKWMHVLGVPMVITVAIYAVLDRSKFQGYSLADHPPLSNWGMGAFGTINFSE-LRETPRKYWFYISRTFLSVNINVSSILLILIDAVCLEDVRTKVKSTREVDFSNAIGGTKKFRSMACAIPCMSLVGNFMGVTTQAAFVQSMILVFAGGKTGLSAVVTGALLLMTTVMWPLLPLLAPAHVSGALTVVISLRFFTVIKMIDVNEPRNLLMFG 371
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: F7JQI4_9FIRM (Uncharacterized protein n=4 Tax=Lachnospiraceae TaxID=186803 RepID=F7JQI4_9FIRM) HSP 1 Score: 65.1 bits (157), Expect = 3.880e-8 Identity = 83/316 (26.27%), Postives = 154/316 (48.73%), Query Frame = 1 Query: 7 EHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLT----WQNTVG-LAIITAACTKVAD-------PASKTRKWVLI-ILAPTV--LTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGG-FLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLL 906 E L FI+ + + A+ LR + + IP A++L GI + I+I+GL++ GL++++ TL + W++ G +A++ A + A + +L+ I+A T+ + GV +K + + A +++ E SF +DFGG F + P +F V+ LVIS + L+ + DS+ + K S +D I K LM+ I + G ++G +T V+S + AGGR+G++S+VT +LF+ S + P++ + VPG + + + + ++ +D + N L Sbjct: 116 EALVIVFISGIFFIVITAVGLREAIIRSIPDAVKLAITPGIGLFITIIGLKNAGLVVSNPSTLVSMVDFAQWRSEDGNMALVCGALVALVGLVVIGVLHAKNVKGSILLGIVAATIVGIPLGV------TKLSAFDMNIGAKFADFFEVSFMKMDFGGMFSGKNPVDTFFTVLMLVISFS------LVNMFDSI--GTLMGAAKQSGMIDKDGEIIH-MKEALMSDAIS--TAAGAMVGTSTVTTVVESSAGIAAGGRTGMTSLVTALLFLASIIFAPIVGI-VPGAATAPALIFVGILMLGNIKDVDFSDMTNAL 413
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A174TDY6_9FIRM (NCS2 family permease n=6 Tax=Anaerotruncus colihominis TaxID=169435 RepID=A0A174TDY6_9FIRM) HSP 1 Score: 65.1 bits (157), Expect = 3.890e-8 Identity = 75/304 (24.67%), Postives = 142/304 (46.71%), Query Frame = 1 Query: 4 GEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLT----W-----QNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVT 888 G+ LA FI+ + + A+ R + V IP +R GI + ++++GL++ GL++++S TL L W V A++ V R II+ V T +G S F G+S+ S++ + S +DF G A + N F ++ ++ I I+ S L+D + + + + ++ + + + G + R L + VG +G +T FV+S + GGR+GL+S+VT +LF+ S ++ P++ + VPG + + + + ++ +D T Sbjct: 116 GQALAIVFISGILFIVITAIGFREACVRAIPPCVRGAISAGIGLFLALIGLKNAGLVVSNSSTLVALIDFSKWGDPELHGLVASALVALVGLVVIGALHARRIKGSIIIGILVATIVGVPLGVTS-FGGFSMNIGQQFSDFVDVSLFKMDFAGLFADSANV--FQMVFTLVMIVISFS-----LVDM--FDTIGTLLGTAKQANMLDQNGDMPRMRQAMMADALATTVGACLGSSTATTFVESSTGIAEGGRTGLTSLVTSLLFLASIIIAPIVGI-VPGAATAPALIFVGVLMMGSIKELDFT 408
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: UPI001C0AB35F (NCS2 family permease n=3 Tax=Deinococcus TaxID=1298 RepID=UPI001C0AB35F) HSP 1 Score: 62.8 bits (151), Expect = 2.220e-7 Identity = 72/285 (25.26%), Postives = 116/285 (40.70%), Query Frame = 1 Query: 70 RLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTL-------RPLTWQNTVGLAIITAACTKVADPASKTRKW-VLIILAPTVLT-AGVYAVGDRSKFKGYSLAENAPLSN-----WGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882 R + V IPT+L+ GI ++ LGLRS GL++++ TL P W +GL I A ++ + W +L A +LT A VYA G+ + + A L W G +D G L + + S++ + + S F + G + R + L + G MG +T +V+S + GGR+GL++V GVLF+LS LWPL +PG + +++ +R +D Sbjct: 136 RQAIVQAIPTSLKFAITGGIGAFLAFLGLRSAGLVVSNDATLLGLGSLRAPTVWLALLGLLI---AAVLMSRRVTGAILWSILATTAVAILTGAAVYAGGENGALRAFPGFGGAFLGIFGTPVWPSSLVGQLDLAGALG------------------LGLLSVVFTFFFVDFFDATGTLTGLSQRAGFLDEHGNMPRARRLFAMDGLAAMFGAFMGTSTTTAYVESASGIGEGGRTGLTAVTVGVLFLLSMFLWPLAAA-IPGAATAPALILVGALMMEGVRQVD 398
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A498CZX8_9FIRM (NCS2 family permease n=2 Tax=Anaerotruncus TaxID=244127 RepID=A0A498CZX8_9FIRM) HSP 1 Score: 62.8 bits (151), Expect = 2.240e-7 Identity = 73/288 (25.35%), Postives = 134/288 (46.53%), Query Frame = 1 Query: 4 GEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVG--------LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVV 843 G+ LA FI+ + + A+ R + V IP +R GI + ++++GL++ GL++++S TL L + +G + I A V A R I+ V+ V + F G+SL S++ S +DFGG A A N F +I ++ I I+ S L+D + + + + ++ + + G + R + + + VG +G +T FV+S + GGR+GL+S+ T +LF+ S ++ P++ ++ + AL V Sbjct: 116 GQALAIVFISGILFILITAVGFREAVVKAIPHCVRGAISAGIGLFLALIGLKNAGLVVSNSSTLVALVDFSKMGDPELHGLICSAIVALIGLVVIGALHARNIKGSIIIGIVVATIVGIPLGVTSFHGFSLDVGRQFSDFVNVSLFKMDFGGLFAGATNI--FQMIFTLVMIVISFS-----LVDM--FDTIGTLLGTARQAKMLDDKGEMPRMREAMMSDAIATTVGACLGTSTATTFVESSTGIAEGGRTGLTSLTTSILFLASIIIAPIVGIIPSAATAPALVFV 394
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: UPI000B2E91DF (NCS2 family permease n=1 Tax=Alkaliphilus transvaalensis TaxID=114628 RepID=UPI000B2E91DF) HSP 1 Score: 61.2 bits (147), Expect = 6.880e-7 Identity = 74/294 (25.17%), Postives = 133/294 (45.24%), Query Frame = 1 Query: 7 EHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVG--LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882 + LA FI+ + + +R V IP +L+ G GI + I++LG ++ G+++++ TL LT + G LA+I T + A K + +L+ + T L G+ ++ +SL + L W DF G L N I V+++ I+ S L+D + + + + + + + G + + G +G +T FV+S V GG++GL+SV TGVLF+LS L P ++VPG + +++ + +R I+ Sbjct: 103 QALAAIFISGILFILLTVTGVREMIVEGIPNSLKHAIGGGIGLFIALLGFKNAGIIVSNPATLLALTDFKSAGPILAVIGITITGILM-AKKVKGAILVGIVATALL-GIPMGVTNTEVMAFSLDISPTLFKW--------DFAGLL-DIGNAGVVGAITSVLTVVISFS-----LVDM--FDTIGTLIGTGSRAGMLDEKGKLPNMNRALLADAVATSAGAALGTSTVTTFVESAAGVAEGGKTGLTSVTTGVLFILSVFLAPF-ALMVPGEATAPALIIVGVLMMGSVRQIN 377
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A6N7VW92_9FIRM (NCS2 family permease n=2 Tax=Anaerococcus TaxID=165779 RepID=A0A6N7VW92_9FIRM) HSP 1 Score: 60.8 bits (146), Expect = 9.620e-7 Identity = 80/310 (25.81%), Postives = 146/310 (47.10%), Query Frame = 1 Query: 25 FIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPL----TWQNTVG---------LAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHW---FHVIRLVISITINISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRPGNLL 906 FI+ + + AL +R + + IP +++L GI + I+I+GL++ GL++ + TL L W+ G LA+I + + ++ I++ T++ + +K SL LS++ E SF +DF G L + PN W F V LV+S + L+ + DS L + + K S VD + + ++ LM+ I + G L+G +T V+S + AGGR+GL+S+ T +LF+LS + P++ + +P + + + + ++ +D N L Sbjct: 122 FISGILFIVITALGIREAIIRAIPDSIKLAMTPGIGLFITIIGLKNAGLVVRNDATLVSLIDFANWRGADGNIEMILGAVLALIGLCIIAILTYKNVKGAILISIISSTIIGIPM----GLTKISNLSLNIGPKLSDFFEVSFFNLDFAG-LFQGPNL-WSSIFTVTMLVLSFS------LVNMFDS--LGTLLAAAKQSGLVDKNGEVINLKQ-ALMSDAIS--TAAGALVGTSTVTTVVESSAGIAAGGRTGLTSLTTALLFLLSIIFVPIISI-IPAQATAPALIFVGVLMLAGIKEVDFADVTNAL 413
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: H1D609_9FUSO (Uncharacterized protein n=1 Tax=Fusobacterium necrophorum subsp. funduliforme 1_1_36S TaxID=742814 RepID=H1D609_9FUSO) HSP 1 Score: 60.1 bits (144), Expect = 1.160e-6 Identity = 76/267 (28.46%), Postives = 127/267 (47.57%), Query Frame = 1 Query: 91 IPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLI-ILAPTVLTAGVYAVGDRSKFKGYSLAEN-APLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITINISSILLV-LIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMID 882 IP ++++ G GI + I+++GL+++GL++ + TL L L I V + + +LI IL+ TVL + V S F SL + AP+ F +D ++ Q +S+ I S + V L DS + + + S E+ G + F M T + G +MG +T FV+S + AG R+GL+SVVT +LFVLS + PL+ V VPG+ + + +++ + F +R +D Sbjct: 19 IPLSIKIAVGAGIGLFITLIGLKNMGLVVKNEATLVGLGVLGPEVLIGIAGLFIAVILEIKRVKGGILIGILSSTVLAFIFHKVEMPSSF--VSLPPSMAPI-------FMKLDI-----KSAFQ---------LSLMGPIFSFMFVDLFDS-----LGTLISCSKEIGLVEKDGKIKGFGKMLYTDVASTIFGAVMGTSTVTTFVESSAGIAAGARTGLASVVTAILFVLSLIFAPLVGV-VPGYATASALIIVGVYMFKNVRFLD 256
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A412G2H2_9FIRM (NCS2 family permease n=6 Tax=Holdemania TaxID=61170 RepID=A0A412G2H2_9FIRM) HSP 1 Score: 60.5 bits (145), Expect = 1.220e-6 Identity = 76/283 (26.86%), Postives = 130/283 (45.94%), Query Frame = 1 Query: 13 LADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFT---LRPLTWQNTVGLAIITAACTKV--ADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSLAENAPLSNWGEGSFGIVDFGGFLARAPNQHWFHVIRLVISITI-NISSILLVLIDSVCLEQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVV 843 LA F++ + + LR ++ IP L+L G GI I+ +GL++ G+++A+ T L LT V LAI A T + A + W LI A + AG+ V + + + N + G GF ++ + VI + + + + L+ + + L + ++++ + S+++G +CVG ++G +T FV+S V GGR+GL++V TGVLF+LS V +PLL V+ + AL VV Sbjct: 101 LAAVFVSGIIFIVISVTGLRKMIINAIPQQLKLAIGAGIGFFIAFIGLKNAGIIVANESTFVALGKLT-DPVVLLAIFGLALTLILLAKKVTAAVFWGLIGTAVVGVIAGLCGVANMPQLPTAIMQFNFEMPTLG------AFMSGFGELFAHKDFIVVIFSFLFVDFFDTAGTLVAVANRAGLVNEKGELENIEKALLSDSVG---------------TCVGAVLGTSTVTSFVESTSGVEVGGRTGLTAVTTGVLFLLSIVFFPLLSVVTSAVTAPALIVV 361
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Match: A0A5C7F3R1_9ACTN (NCS2 family permease n=1 Tax=Collinsella sp. BA40 TaxID=2560852 RepID=A0A5C7F3R1_9ACTN) HSP 1 Score: 60.5 bits (145), Expect = 1.220e-6 Identity = 82/305 (26.89%), Postives = 136/305 (44.59%), Query Frame = 1 Query: 28 IANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILGLRSLGLLLADSFTLRPLTWQNTVGLAIITAACTKVADPASKTRKWVLIILAPTVLTAGVYAVGDRSKFKGYSL-------AENAPLSNWG--EGSFGIVDFGGFLA---RAPNQHWFHVIRLVISITINISSILLVLIDSVCL----EQMRSKVKSSAEVDFSNAIGGTQKFRLMACTIPLMSCVGNLMGVTTQAVFVQSMIVVFAGGRSGLSSVVTGVLFVLSTVLWPLLPVLVPGHVSGALTVVISLRFFTVMRMIDVTRP 894 + L LA LR + + +P +LR G+ + I++LGL + G+++ D TL +T+ + V DP L+ + V+T +Y K KGY L PL EG + DF F A +A + ++++ ++ T LLV + S+ L + M + V + DF + G + R + L + VG L+G ++ FV+S GGR+GLSS+VTG++F+L+ PL+ ++ GAL V++ V+ ID T P Sbjct: 105 LEGLVILALVLCGLREAIMDAVPVSLRHAIAVGLGIFIALLGLINGGIVVNDEATL--ITFGS-------------VYDPVF------LVGMISVVVTFMLYVF----KIKGYILWGIIIAAVVGIPLGVTALPEGIVSMPDFTTFGAPFQQAADGSGMAIVKVFVNPT------LLVFVFSIMLSDFFDTMGTAVAVGKQGDFLDEDGNVKDIRPILIVDSLAASVGGLLGASSCTTFVESSAGAADGGRTGLSSIVTGIIFLLAAFFSPLVGMIAAPATCGAL-VMVGFLMMNVVADIDFTNP 377 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14723.3432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14723.3432.1 >prot_L-elsbetiae_contig14723.3432.1 ID=prot_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp MGEHLADQFIANLAALAFFALALRLSFVSYIPTALRLGAGCGISVMISILback to top mRNA from alignment at L-elsbetiae_contig14723:6..3234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14723.3432.1 ID=mRNA_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3229bp|location=Sequence derived from alignment at L-elsbetiae_contig14723:6..3234+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14723:6..3234+ >mRNA_L-elsbetiae_contig14723.3432.1 ID=mRNA_L-elsbetiae_contig14723.3432.1|Name=mRNA_L-elsbetiae_contig14723.3432.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig14723:6..3234+ (Laminarionema elsbetiae ELsaHSoW15)back to top |