mRNA_L-elsbetiae_contig14623.3378.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: D8LE29_ECTSI (Thiaminase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE29_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.740e-44 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKN---NPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMV 378 LW DCQLEAMRSLHHPWTLGLATGKT+ ASF NYVAQDA+FLRAFAKAYAY L KA+DE+ +RAFHSLIGSVLEEL LH+SY+ KWG+D+ N + P + Y ++ T +S+ A ++ +++ Sbjct: 18 LWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVANELRHAFPNWTESAYAEWIETYSSEDFEDAAGLVESLL 146
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A7S3XK69_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK69_HETAK) HSP 1 Score: 154 bits (388), Expect = 3.310e-44 Identity = 75/137 (54.74%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLGK 411 LW D EA +SLHHPW +GL G + SF Y+AQDAFFL +FAKAYA+ L K D + + AFH LIG+VL+EL LHS A +WGVDL P +AT +Y FL+ A S+ A VLAAM PCMRLYA LG+ Sbjct: 53 LWEDNLKEAQKSLHHPWVVGLGLGTLEKESFAQYIAQDAFFLESFAKAYAFALGKCSDREGIVAFHGLIGAVLDELKLHSGLAERWGVDLAALREPKQATDDYTGFLMATAQAADSTPADVLAAMAPCMRLYAHLGR 189
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A6H5J5C1_9PHAE (TENA_THI-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5C1_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.700e-43 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKN 276 LW DCQLEAMRSLHHPWTLGLATGKT+ ASF NYVAQDA+FLRAFAKAYAY L KA+DE+ +RAFHSLIGSVLEEL LH+SY+ KWG+D+ N Sbjct: 15 LWQDCQLEAMRSLHHPWTLGLATGKTSLASFKNYVAQDAYFLRAFAKAYAYALAKAEDEEDIRAFHSLIGSVLEELGLHASYSAKWGIDVAN 106
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A835YZC1_9STRA (Putative TenA family transcriptional activator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC1_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.550e-39 Identity = 74/146 (50.68%), Postives = 96/146 (65.75%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRA-------FAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLK---NNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLG 408 LW C+ EA+ SL+HP+ L LATG + +F Y+ QDA +L+A FA+AY + L KA D + +RAFH L+GS LEELTLH ++A KWGV+L + P+ AT Y +FLL + D S+ A VLAAM PCMRLYAFLG Sbjct: 19 LWRACKEEALNSLYHPFVLQLATGALPKEAFQIYITQDAIYLQARLRRESAFARAYGHALTKAPDAEGMRAFHKLMGSALEELTLHEAFAEKWGVNLAEAIDRDGPLPATRAYTSFLLQIGGDSRSTCADVLAAMAPCMRLYAFLG 164
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A2P6THD7_CHLSO (Family transcriptional regulator n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6THD7_CHLSO) HSP 1 Score: 132 bits (331), Expect = 9.030e-36 Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 1 LWGDCQLEA--MRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKAD--DEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLG 408 LWGD Q++A +R+LHHP+ + LA+G R +F +Y+A+DAFFL++FA+ Y+ + + E R L+ V EEL LH SYA +WGVDL + P AT YV+++ +A DP VA +L+AMVPC+RLYAFL Sbjct: 15 LWGDAQVQASVLRALHHPFVIALASGVLPREAFQSYIAEDAFFLKSFAEGYSAAISRCGPGQEHVARGLGELLQGVQEELKLHDSYAAEWGVDLSQHQQPNPATRAYVDWVHAIAQDPKQGVAGILSAMVPCLRLYAFLA 154
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A6M8BAV9_9CYAN (TenA family protein n=3 Tax=Thermoleptolyngbya TaxID=2303528 RepID=A0A6M8BAV9_9CYAN) HSP 1 Score: 128 bits (322), Expect = 1.140e-34 Identity = 67/137 (48.91%), Postives = 88/137 (64.23%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLGK 411 LW + Q A+ L+HP+ G+ G ++A F+ YV QDAFFL AFA+AY+ KA D + + FH+L G VL EL LH SYA++WGVDL++ P AT Y +FLL A T V V AM+PCM+LYAFLG+ Sbjct: 7 LWQENQDLAIACLNHPFVQGIGDGSLDKAKFSYYVGQDAFFLEAFARAYSIAAAKAPDWQGFQVFHTLAGGVLHELNLHESYAIQWGVDLRSVQPGA-ATRRYTDFLLATAWSQTVGVTAV--AMLPCMKLYAFLGQ 140
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A1G7QCH8_9ACTN (Thiaminase (Transcriptional activator TenA) n=1 Tax=Blastococcus sp. DSM 44268 TaxID=1550231 RepID=A0A1G7QCH8_9ACTN) HSP 1 Score: 127 bits (320), Expect = 2.400e-34 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLGK 411 LW D A +L HP+ GLA G R FT YVAQDAFFL+AFA+AYA ++++ D + AF L+ V EEL LH YA +WG+DL P AT+ Y +FLL A+ T + ++ AAM PCMRLYA LG+ Sbjct: 7 LWADTSDLADATLAHPFVQGLADGSLPRERFTGYVAQDAFFLQAFARAYAMAVVRSPDRAGLEAFADLLAGVREELRLHDGYAARWGIDLAG-VAPAPATSAYTDFLLATAA--TGGLGEICAAMTPCMRLYAHLGQ 140
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A1H8VDR3_9ACTN (Thiaminase (Transcriptional activator TenA) n=1 Tax=Blastococcus endophyticus TaxID=673521 RepID=A0A1H8VDR3_9ACTN) HSP 1 Score: 125 bits (315), Expect = 1.190e-33 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLGK 411 LW D A +L HP+ GLA G R F YVAQDAFFL+AFA+ YA ++++ D + AF L+ V +EL LH YA +WG+DL PV AT+ Y +FLL A+ T + +V AAM PCMRLYAFLG+ Sbjct: 7 LWADSADLADAALAHPFVRGLADGSLPRERFAGYVAQDAFFLQAFARGYAMAVVRSPDRAGLDAFAGLLAGVRDELRLHDGYAARWGIDLAA-VAPVPATSAYTDFLLATAA--TGGLGEVCAAMTPCMRLYAFLGQ 140
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A383WBI9_TETOB (Thiamine phosphate synthase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WBI9_TETOB) HSP 1 Score: 134 bits (336), Expect = 1.290e-33 Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVL----EELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLG 408 LW D Q EAM +LHHP+ LA G +RA F +YV QD FFL FA+AYA + K ++ A +++ +L EL LH SYA KWGV + P AT++Y +FL+ VA+DP +SVA+VLAAM+PC RLY FLG Sbjct: 44 LWADSQAEAMEALHHPFVQALAAGTLDRACFQHYVLQDLFFLTRFARAYAAAIDKCGTTPALAAAKAVLAELLLGVDAELKLHGSYAAKWGVAVDEWVWPSAATSQYTDFLMQVATDPETSVAEVLAAMIPCARLYGFLG 183
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Match: A0A261KY94_9CYAN (TenA family transcriptional regulator n=1 Tax=Hydrocoleum sp. CS-953 TaxID=1671698 RepID=A0A261KY94_9CYAN) HSP 1 Score: 125 bits (314), Expect = 1.870e-33 Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 1 LWGDCQLEAMRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEKSVRAFHSLIGSVLEELTLHSSYAVKWGVDLKNNPPPVKATTEYVNFLLTVASDPTSSVAQVLAAMVPCMRLYAFLGK 411 LW Q A L HP+ G+A G + SF YV QDAFFLRAFA+AY+ K+ + K+ FH+L+G V EEL LH SYA KWGV+L+N P AT Y +FLL A +++ + AM PCMRLYAFLG+ Sbjct: 7 LWKTNQHLATACLSHPFVQGIADGTLPQKSFAYYVGQDAFFLRAFARAYSIAAAKSPEWKTFELFHTLVGGVKEELELHQSYAAKWGVNLENITPGF-ATRRYTDFLLATAWG--NNIGAIATAMTPCMRLYAFLGQ 140 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14623.3378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14623.3378.1 >prot_L-elsbetiae_contig14623.3378.1 ID=prot_L-elsbetiae_contig14623.3378.1|Name=mRNA_L-elsbetiae_contig14623.3378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MRSLHHPWTLGLATGKTNRASFTNYVAQDAFFLRAFAKAYAYVLIKADDEback to top mRNA from alignment at L-elsbetiae_contig14623:691..1311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14623.3378.1 ID=mRNA_L-elsbetiae_contig14623.3378.1|Name=mRNA_L-elsbetiae_contig14623.3378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=621bp|location=Sequence derived from alignment at L-elsbetiae_contig14623:691..1311+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14623:691..1311+ >mRNA_L-elsbetiae_contig14623.3378.1 ID=mRNA_L-elsbetiae_contig14623.3378.1|Name=mRNA_L-elsbetiae_contig14623.3378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig14623:691..1311+ (Laminarionema elsbetiae ELsaHSoW15)back to top |