mRNA_L-elsbetiae_contig14587.3348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14587.3348.1
Unique NamemRNA_L-elsbetiae_contig14587.3348.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.280e-142
Identity = 230/276 (83.33%), Postives = 245/276 (88.77%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAP---AGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820
            DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRGSIEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSD  MWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P   +GTAAA   +            DATLSSMV+ETG +S++HLR LA EAW+ASE  RG
Sbjct:   94 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGSIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASSGTAAAARETXXXXXX------DATLSSMVDETGVSSAKHLRRLAQEAWKASEGKRG 363          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 1.790e-131
Identity = 227/273 (83.15%), Postives = 245/273 (89.74%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820
            DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRG IEIDGVDIS VGLHDLRP+MSVVPQTPFLFSGSMRLNLDPFAKQSD  MWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P  +  + AA+ + TA   +A ADATLSSMV+ETG +S++HLR LA EAW AS    G
Sbjct: 1190 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGGIEIDGVDISKVGLHDLRPKMSVVPQTPFLFSGSMRLNLDPFAKQSDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASCGSVAAARETTA---SAAADATLSSMVDETGVSSAKHLRRLAQEAWNASNGKGG 1459          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 3.230e-131
Identity = 228/273 (83.52%), Postives = 243/273 (89.01%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820
            DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRGSIEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSD HMWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P    A++  +           ADATLSSMV+ETG AS++HLR LA EAW+ASE   G
Sbjct: 1210 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGSIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPP---ASSGTAXXXXXXXXXXXADATLSSMVDETGVASAKHLRRLAQEAWKASEGKEG 1479          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 1.620e-129
Identity = 225/273 (82.42%), Postives = 241/273 (88.28%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820
            DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD +RG IEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPF KQSD HMWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P  +   TAA+ + +A      A ATLSSMV+ETG +S+ HLR LA  AW ASE   G
Sbjct: 1159 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRERGGIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFGKQSDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASCGTTAAACETSAA-----AYATLSSMVDETGVSSAMHLRRLAQGAWNASEGKGG 1426          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 2.030e-114
Identity = 206/269 (76.58%), Postives = 223/269 (82.90%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASE 808
            DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVE+D DRG IEIDGVDIS VGLHDLRP+MSVVPQTPFLFSGSMRLNLDPFAKQSD HMWA+LEAVQMK +VQSLPGGLDAPV+EGGGNLSVGQRQLLCLARAVLQ++Q+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV  L    + + G                          A A ADATLSSMV+ETG +S++HLR LA EAW AS+
Sbjct: 1109 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEFDRDRGGIEIDGVDISRVGLHDLRPKMSVVPQTPFLFSGSMRLNLDPFAKQSDAHMWASLEAVQMKTYVQSLPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVNYLQY--LYDEGFDQR--------------------SDAWAAADATLSSMVDETGISSAKHLRRLAQEAWNASK 1355          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A7S3Y5Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z6_HETAK)

HSP 1 Score: 262 bits (670), Expect = 1.890e-80
Identity = 142/216 (65.74%), Postives = 171/216 (79.17%), Query Frame = 2
Query:    5 LPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDR--GSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAK-QSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQ 643
            LPPVLK LT +I+GG RVGVVGRTGAGKSSL+  LFRL+E D  R   ++ IDGV+ S +GLHDLR RMSV+PQTPFLFSG++R NLDPF K + D   W+AL AV++   V++  GGL A V+EGGGN SVGQRQLLCL RA+L + +VLV+DEATAN+D  TD LIQD VRT F+G TVIM+AHRL+TVIDCDQ++VL +G VVE G PH LLQ
Sbjct:  114 LPPVLKGLTFTIQGGWRVGVVGRTGAGKSSLVGVLFRLLERDGARPGSALAIDGVETSGLGLHDLRLRMSVIPQTPFLFSGTVRENLDPFDKIEDDGEFWSALAAVRLDGAVKAQ-GGLGASVAEGGGNWSVGQRQLLCLGRALLARHRVLVLDEATANVDLETDGLIQDAVRTKFQGCTVIMIAHRLHTVIDCDQILVLGDGRVVEQGAPHTLLQ 328          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A1B0D837_PHLPP (ABC transporter domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D837_PHLPP)

HSP 1 Score: 250 bits (638), Expect = 1.360e-76
Identity = 133/265 (50.19%), Postives = 181/265 (68.30%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAW 796
            D   VLKDL  SI+ G ++G+VGRTGAGKSS+I ALFRL   +   G IEIDG+D  T+GLHDLR ++S++PQ P LFSGS+R NLDPF ++ D  +W+ALE V+++  V  L GG+D  +++GG N S+GQRQL+CLARA+L+ +++LV+DEATAN+D  TD LIQ  +RT F   TV+ +AHRL+TV+D D+V+V+  G VVE G PH LLQ P G                       L S+V++TGPA++  L  +A EA+
Sbjct:   72 DTEVVLKDLNFSIQPGEKIGIVGRTGAGKSSMIQALFRLAPIE---GRIEIDGIDTQTLGLHDLRSKISIIPQDPILFSGSLRANLDPFEERKDAEIWSALEGVELRGAVGQLAGGIDCRMADGGSNFSMGQRQLVCLARAILRDNRILVLDEATANVDPETDRLIQTTIRTRFAHCTVLTIAHRLHTVMDSDRVLVIDAGRVVEFGQPHELLQRPGGH----------------------LRSLVDQTGPATASLLSQVAEEAF 311          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6V7M5Z7_9HYME (ABC transporter domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M5Z7_9HYME)

HSP 1 Score: 247 bits (630), Expect = 2.720e-76
Identity = 137/269 (50.93%), Postives = 178/269 (66.17%), Query Frame = 2
Query:    8 PPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERA 814
            PPVLKDL   +KG  +VG+VGRTGAGKSSLIA+LFRL E +   G I +D V+   +GLHDLR ++S++PQ PFLFSG++R NLDPF    D  +WAALE V++K+       GL A ++EGG NLSVGQRQL+CLARA+++ +++LV+DEATAN+D  TD LIQ  +R  F   TV+ +AHRLNTV+D D+++V+  GSVVE  HPH+LLQ   G                       LSSMV+ETG    E L+ +A E WE    A
Sbjct:   13 PPVLKDLNFEVKGKEKVGIVGRTGAGKSSLIASLFRLAELE---GEIIVDDVETGEIGLHDLRSKISIIPQEPFLFSGTLRRNLDPFDSYKDDVLWAALEDVELKEM------GLLAHINEGGSNLSVGQRQLVCLARAIVRNNRILVLDEATANVDPRTDELIQKTIRRKFADCTVLTIAHRLNTVMDSDRILVMDAGSVVEFDHPHVLLQNETGY----------------------LSSMVKETGRMMEEALKTVAKENWELRNSA 250          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A7R9MGF6_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MGF6_9ACAR)

HSP 1 Score: 246 bits (629), Expect = 5.670e-76
Identity = 127/210 (60.48%), Postives = 161/210 (76.67%), Query Frame = 2
Query:   14 VLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQ 643
            VLK +   +KGG +VGVVGRTGAGKSS+I+ALFR+ E +   G I IDGVDI ++GLHDLR ++S++PQ P LF+GS+R NLDPF    D  +WAALE VQ+K+ V  LPG LD  V+EGG N SVGQRQL+CLARA+L+ ++VLV+DEATAN+D  TD+LIQ  +R  F+  TVI +AHRLNT+ID D+V+VL  G VVE G PH LL+
Sbjct:   10 VLKGINCVLKGGEKVGVVGRTGAGKSSVISALFRMNEPE---GQILIDGVDIQSIGLHDLRRQISIIPQEPVLFTGSVRKNLDPFGDHPDDELWAALEEVQLKESVVQLPGQLDGLVTEGGSNFSVGQRQLVCLARAILRDNRVLVLDEATANVDHRTDALIQRTIREKFRYCTVITIAHRLNTIIDSDKVIVLDAGEVVEFGIPHTLLE 216          
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A2S2PMX1_SCHGA (Putative multidrug resistance-associated protein lethal (Fragment) n=2 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PMX1_SCHGA)

HSP 1 Score: 247 bits (630), Expect = 3.090e-75
Identity = 131/272 (48.16%), Postives = 185/272 (68.01%), Query Frame = 2
Query:    2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERAR 817
            D P VLKDL + I+   ++G+VGRTGAGKSSLI ALFRL     + GSI +D +DI+ +GLH+LR ++S++PQ P LFSG+MR NLDPF +  D  +W AL+ V++KD V+ LPGGL++ +SEGG N SVGQRQL+CLARA+++ +++LV+DEATAN+D  TD+LIQ+ +R  F+  TV+ +AHRLNTV+D D+V+V+  G +VE  HPH LL+                        D  L  MV++TG A++E L  +A E++   +  R
Sbjct:   66 DSPHVLKDLNIKIESMEKIGIVGRTGAGKSSLIGALFRLA---LNEGSILVDDLDINDLGLHELRSKLSIIPQEPVLFSGTMRKNLDPFDEYPDHALWNALDEVELKDAVEDLPGGLNSKMSEGGSNFSVGQRQLVCLARAIVRNNRILVLDEATANVDPQTDALIQNTIRNKFRLCTVLTIAHRLNTVMDSDKVLVMDAGKMVEFDHPHNLLK----------------------NKDGFLYKMVDQTGKATAELLHSVAAESYRTQQLTR 312          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW5_ECTSI1.280e-14283.33ABC transporter domain-containing protein n=1 Tax=... [more]
D8LSW4_ECTSI1.790e-13183.15Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDN6_9PHAE3.230e-13183.52ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSW3_ECTSI1.620e-12982.42Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDL0_9PHAE2.030e-11476.58ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S3Y5Z6_HETAK1.890e-8065.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1B0D837_PHLPP1.360e-7650.19ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6V7M5Z7_9HYME2.720e-7650.93ABC transporter domain-containing protein (Fragmen... [more]
A0A7R9MGF6_9ACAR5.670e-7660.48Hypothetical protein (Fragment) n=1 Tax=Oppiella n... [more]
A0A2S2PMX1_SCHGA3.090e-7548.16Putative multidrug resistance-associated protein l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14587contigL-elsbetiae_contig14587:282..2923 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score306.2
Seed ortholog evalue1.1e-80
Seed eggNOG ortholog2880.D8LSW4
KEGG koko:K05673
KEGG TC3.A.1.208.7
KEGG Pathwayko01523,ko02010,ko04024,ko04976,map01523,map02010,map04024,map04976
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0054@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons5
Model size1296
Cds size621
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815585.9404833-UTR-L-elsbetiae_contig14587:281..7541622815585.9404833-UTR-L-elsbetiae_contig14587:281..754Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 282..754 -
1691682975.078898-UTR-L-elsbetiae_contig14587:281..7541691682975.078898-UTR-L-elsbetiae_contig14587:281..754Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 282..754 -
1622815586.007097-UTR-L-elsbetiae_contig14587:2295..23591622815586.007097-UTR-L-elsbetiae_contig14587:2295..2359Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 2296..2359 -
1691682975.1402068-UTR-L-elsbetiae_contig14587:2295..23591691682975.1402068-UTR-L-elsbetiae_contig14587:2295..2359Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 2296..2359 -
1622815586.0182915-UTR-L-elsbetiae_contig14587:2785..29231622815586.0182915-UTR-L-elsbetiae_contig14587:2785..2923Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 2786..2923 -
1691682975.15009-UTR-L-elsbetiae_contig14587:2785..29231691682975.15009-UTR-L-elsbetiae_contig14587:2785..2923Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14587 2786..2923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815585.9521527-CDS-L-elsbetiae_contig14587:754..9941622815585.9521527-CDS-L-elsbetiae_contig14587:754..994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 755..994 -
1691682975.0903397-CDS-L-elsbetiae_contig14587:754..9941691682975.0903397-CDS-L-elsbetiae_contig14587:754..994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 755..994 -
1622815585.9640894-CDS-L-elsbetiae_contig14587:1415..16101622815585.9640894-CDS-L-elsbetiae_contig14587:1415..1610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 1416..1610 -
1691682975.1029394-CDS-L-elsbetiae_contig14587:1415..16101691682975.1029394-CDS-L-elsbetiae_contig14587:1415..1610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 1416..1610 -
1622815585.976377-CDS-L-elsbetiae_contig14587:1821..19361622815585.976377-CDS-L-elsbetiae_contig14587:1821..1936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 1822..1936 -
1691682975.1112847-CDS-L-elsbetiae_contig14587:1821..19361691682975.1112847-CDS-L-elsbetiae_contig14587:1821..1936Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 1822..1936 -
1622815585.9932222-CDS-L-elsbetiae_contig14587:2224..22951622815585.9932222-CDS-L-elsbetiae_contig14587:2224..2295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 2225..2295 -
1691682975.1270192-CDS-L-elsbetiae_contig14587:2224..22951691682975.1270192-CDS-L-elsbetiae_contig14587:2224..2295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14587 2225..2295 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14587.3348.1prot_L-elsbetiae_contig14587.3348.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14587 755..2295 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14587.3348.1

>prot_L-elsbetiae_contig14587.3348.1 ID=prot_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGL
DAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQ
DVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPA
GTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEA
SERARG*
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mRNA from alignment at L-elsbetiae_contig14587:282..2923-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14587.3348.1 ID=mRNA_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2642bp|location=Sequence derived from alignment at L-elsbetiae_contig14587:282..2923- (Laminarionema elsbetiae ELsaHSoW15)
GGACCTTCCGCCTGTGCTCAAAGACCTGACTCTGTCCATCAAGGGGGGCT CGAGGGTAGGGGTGGTCGGGAGGACGGGAGCGGGCAAGTCAAGCCTCATC GCCGCGCTGTTCAGGCTGGTGGAGTATGACACGGACAGGTGTGTGGTGAC TGGCAACCTGGCTACCTTTTTGCTTGTGAAATCATTCGGCGCGGTTTGGT GTGGAGAGGGAGTCGTTTGTTTTCCGTTTTCGCCTTGCAGCCTGTCGAGG ACTTATCCCCTCTGCTTCCTTGCAGCTTCTCTGGGCTTGAAATCGCGCCA GAAGAAATTCCAGGGCCATCTGGCCATACACATCAACTGGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGGTCCTTCACATTTAATACCGTTCCGAT CTGCCTCCCGATGTCCGCACAATCCAACACTTGATGCGGCGATTCCCGTG GTCGCAGGCTAACTTAATGGTGTCCTAACAAATTACGCGTATGCATTCTA CATCCCGAACTTAGCCGTTTCCCGTTGTGCCTCGTGGCCCGCGGCTCATA TTGTGTTGTGGCAGGGGGAGTATCGAGATAGACGGCGTGGACATCTCTAC GGTGGGCCTCCATGATCTGAGGCCCAGGATGTCTGTCGTGCCGCAGACGC CCTTCCTCTTCTCGGGATCGATGCGGCTTAACCTCGACCCCTTCGCCAAG TGAGTATTGGGCGGATGGGCCAGATGACCATTTTGTCATGGCTCTCGCTG CGCCTGTCCCTATGCTGTTTCGTTTGCTGGGTGGCTGGAGACGCCGTGTG TTCTACCACGCTCTGACGCGTTCGTTGATCCGTGCGTACTCTACACGTGC GATCATGCCTACAGGTATAGATCTGCGCTGCGTTCCTCGAACGTTATAAA CACGCTGGCGGCTTCCTCGCTCTTGTATTTCCCCGGCGGTTGGTTTCGAT GTCTCACCATTAACATCTGCGCACGCTGTTTTATCAGGCAATCCGACGTG CACATGTGGGCCGCTCTGGAAGCAGTGCAGATGAAGGACCACGTCCAATC ACTGCCAGGCGGTCTGGATGCCCCGGTATCGGAAGGGGGCGGCAACTTAT CCGTGAGTCTTCTTCGACAAGGGACTGAGCACGTTGGACTACTGTTGTTG GCGCGTTCGTTAGTCCCCTGCTGTCGGTGGCGGTGTATTTGTGATGTTCT ATGGATGCCGTGTTCCCTATCCTCCACCCCCCTGGTTGATACTACATGTA GTTTTAATCCACGGCTTGTTTTCGTCTTTTGCGGCCCTTTGCTGTTTCTT GTTGGGATTGCAGGTTGGGCAGCGGCAGCTGCTATGTCTTGCCAGGGCGG TGCTCCAGCAATCTCAGGTCCTGGTGATGGACGAGGCTACCGCCAACATT GACCAATACACCGACTCCCTGATTCAGGACGTGGTCCGGACGTCATTCAA GGGCAAGACGGTTATCATGGTGGCCCACCGCCTCAACACCGTCATCGACT GCGACCAGGTACGCTGGGGCAAGGAAAAAACATAGTGTGGCGTATCGGTT GTCGGCATGAGGTAGTATATTTTCGTCGGCATTGCCAAAAACAAATGCAC AACAAAATACGCTGAGATGCTTGTAGGATCACTCGAACTCTATCTCCTCT GGCACAGCCTCTTTCTGCCCCATGCTTCGCTGTCCAACCACTTCACGGCC GCCGCGTTCGTTGGTATTTCTGACTGCTTGGTAGGGATCGGAGAGTCGGT ACTCGACGACAGGGGTCATGCACGGCAGTGAGCTCCCACCCAAAGCCCAC TTCTTGTCCGATTTGCGAAAGACCCGGGCAATGATAATGATAACCTCCTT CCTCTCCCCCCATTGCTGTCGGCCTTGCTGTGGTACTCACACACGCCCAA ATCACCGAACACGCCACCGACGTGCCAAGGTCGTGGTGCTATCGGAGGGA AGTGTCGTCGAAGCAGGGCACCCTCATCTTCTTCTGCAGGCCCCTGCTGG AACGGCGGCTGCCACCGCTGCCTCTCTAGATGGCACGGCTGGCATCGCTA CCGCAACGGCTGACGCCACGCTGTCTTCGATGGTTGAGGAGACGGGCCCG GCCAGCTCGGAGCACCTTAGGGGCTTGGCTCTAGAGGCCTGGGAGGCATC GGAGCGGGCACGAGGATAGGAGTAATGGATGTTTTGTCTGTGTGGTCCGC TTGTAAACCAAATCCCCAAAGAAGGTCCTTCGGACTGTCTTGCACTAAGA ATTTGGCTGGATTCCGCGTGCGAGCCCGTCAAAACGGTACTTTCACGCTC AATTTCCCAAAGGCTGGATGAACAGCACAAATCGTACGACCGTGGCGCGT ATGAAAGCTGGGGCCAGAGAATACTGCCGCATGACATAGGTAGGGTTGCC CAGGAGCTTGGATTTTGACCCCCCCCCTGACCCGTTAGCTGATATTTCTA CCGAGGGCGTGTATGCATGCGTGTTTTGACGGCAGTGTCCCGTTGCTTCC ACAGAGAAGGAGCGGGTGTAGACTAAACCACTGCGAGCAAACCGTAGCTC AAATTATAGGATTGATTATTCGGCGCGTGCTTGCATGTACGTTAGTACCA CTTTGTGGCTAAGACATGCCCGGTGTCGTACGTAGATAAGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14587:282..2923-

>mRNA_L-elsbetiae_contig14587.3348.1 ID=mRNA_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig14587:282..2923- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGTCGTGCCGCAGACGCCCTTCCTCTTCTCGGGATCGATGCGGCT
TAACCTCGACCCCTTCGCCAAATGTCTGTCGTGCCGCAGACGCCCTTCCT
CTTCTCGGGATCGATGCGGCTTAACCTCGACCCCTTCGCCAAGCAATCCG
ACGTGCACATGTGGGCCGCTCTGGAAGCAGTGCAGATGAAGGACCACGTC
CAATCACTGCCAGGCGGTCTGGATGCCCCGGTATCGGAAGGGGGCGGCAA
CTTATCCGCAATCCGACGTGCACATGTGGGCCGCTCTGGAAGCAGTGCAG
ATGAAGGACCACGTCCAATCACTGCCAGGCGGTCTGGATGCCCCGGTATC
GGAAGGGGGCGGCAACTTATCCGTTGGGCAGCGGCAGCTGCTATGTCTTG
CCAGGGCGGTGCTCCAGCAATCTCAGGTCCTGGTGATGGACGAGGCTACC
GCCAACATTGACCAATACACCGACTCCCTGATTCAGGACGTGGTCCGGAC
GTCATTCAAGGGCAAGACGGTTATCATGGTGGCCCACCGCCTCAACACCG
TCATCGACTGCGACCAGGTTGGGCAGCGGCAGCTGCTATGTCTTGCCAGG
GCGGTGCTCCAGCAATCTCAGGTCCTGGTGATGGACGAGGCTACCGCCAA
CATTGACCAATACACCGACTCCCTGATTCAGGACGTGGTCCGGACGTCAT
TCAAGGGCAAGACGGTTATCATGGTGGCCCACCGCCTCAACACCGTCATC
GACTGCGACCAGGTCGTGGTGCTATCGGAGGGAAGTGTCGTCGAAGCAGG
GCACCCTCATCTTCTTCTGCAGGCCCCTGCTGGAACGGCGGCTGCCACCG
CTGCCTCTCTAGATGGCACGGCTGGCATCGCTACCGCAACGGCTGACGCC
ACGCTGTCTTCGATGGTTGAGGAGACGGGCCCGGCCAGCTCGGAGCACCT
TAGGGGCTTGGCTCTAGAGGCCTGGGAGGCATCGGAGCGGGCACGAGGAT
AGGTCGTGGTGCTATCGGAGGGAAGTGTCGTCGAAGCAGGGCACCCTCAT
CTTCTTCTGCAGGCCCCTGCTGGAACGGCGGCTGCCACCGCTGCCTCTCT
AGATGGCACGGCTGGCATCGCTACCGCAACGGCTGACGCCACGCTGTCTT
CGATGGTTGAGGAGACGGGCCCGGCCAGCTCGGAGCACCTTAGGGGCTTG
GCTCTAGAGGCCTGGGAGGCATCGGAGCGGGCACGAGGATAG
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