mRNA_L-elsbetiae_contig14564.3337.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A6H5L840_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L840_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.140e-36 Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 2 Query: 590 ATGAYRVS-GEDHTVVVTPGGRALAAGSGRHGVLGASGNINRFLFTEIDFTWQQFPGRVPVAAVACGTRHTLILTAVGTVYSCGLGEYGWLV--TAASTASPALPWWTLSSVSG 922 ATGAYR S GE H+++VTPGGRAL+AGSGRHGVLGASG +NRFLFTE+D W +FPGR+PVAAVACG RHTLILTAVGTV+SCGLG+YG L + AS + P L + S++G Sbjct: 109 ATGAYRASLGETHSLLVTPGGRALSAGSGRHGVLGASGRMNRFLFTEVDLGWGRFPGRIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGSEASLSRPTL----IESLAG 218
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: D8LDL9_ECTSI (Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL9_ECTSI) HSP 1 Score: 145 bits (366), Expect = 2.940e-35 Identity = 76/116 (65.52%), Postives = 92/116 (79.31%), Query Frame = 2 Query: 584 TTATGAYRVS-GEDHTVVVTPGGRALAAGSGRHGVLGASGNINRFLFTEIDFTWQQFPGRVPVAAVACGTRHTLILTAVGTVYSCGLGEYGWLV--TAASTASPALPWWTLSSVSG 922 T+ATGAY S GE H+++VTPGGRAL+AGSGRHGVLG+SG +NRFLFTE+D W +FPGR+PV AVACG RHTLILTAVGTV+SCGLG+YG L AS + P L + S++G Sbjct: 107 TSATGAYSASLGETHSLLVTPGGRALSAGSGRHGVLGSSGRMNRFLFTEVDLGWGRFPGRIPVVAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTL----IDSLAG 218
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A7S4IID6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IID6_9EUKA) HSP 1 Score: 62.0 bits (149), Expect = 3.200e-8 Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 2 Query: 614 GEDHTVVVTPGGRALAAGSGRHGVLGASGNI-NRFLFTEIDFTWQQFPGRVPVAAVACGTRHTLILTAVGTVYSCGLGEYG 853 G+ H++ +T G+ LA GS HG LG + LFT I W + + + ++ACG HTL+LT +G VYSCG ++G Sbjct: 11 GQAHSIAITKTGKILACGSNEHGQLGLGNEVLYHTLFTTIK--WHE---KTHIISIACGNNHTLLLTGLGHVYSCGDNQFG 86
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A7I8VHM6_9ANNE (HECT-type E3 ubiquitin transferase n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VHM6_9ANNE) HSP 1 Score: 61.2 bits (147), Expect = 1.840e-6 Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 862 NGSEHSLSRPTLVDSLVGERITQIAAGQAHSVAVSWKGEAFTWGWGFQHVLGHGDELDRWEP 1047 +G+ + +P +++SL G+ +T IAAG AHS A+S +GE +TWG G LGHGD D+ +P Sbjct: 3889 HGNRQTCDKPRIIESLRGKEVTDIAAGGAHSAAISAQGELYTWGKGRYGRLGHGDSEDQTKP 3950
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A7S1EFC8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EFC8_HEMAN) HSP 1 Score: 56.6 bits (135), Expect = 3.560e-6 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = 2 Query: 617 EDHTVVVTPGGRALAAGSGRHGVLGASGNINRFLFTEIDFTWQQFPGRVPVAAVACGTRHTLILTAVGTVYSCGLGEYGWLVTAAST 877 E HT +VT G L GSG G LG N+N L + VAAVACG+ HT++ TA G VYS G G +G L ++T Sbjct: 1 EHHTCIVTREGGLLTCGSGASGQLGQESNMNLPLPVPVAGLMG-----ARVAAVACGSAHTIVSTAEGKVYSFGWGHFGQLGIGSTT 82
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A7S3T8X5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T8X5_EMIHU) HSP 1 Score: 54.7 bits (130), Expect = 5.210e-6 Identity = 24/69 (34.78%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 853 LASNGSEH--SLSRPTLVDSLVGERITQIAAGQAHSVAVSWKGEAFTWGWGFQHVLGHGDELDRWEPTR 1053 + +G E S S P +++L G+R+ ++A HS+A++ G+ ++WGWG Q +LGHGD+ ++ P + Sbjct: 13 MLGHGDEQIQSQSLPMRIEALAGQRVVAVSASLLHSLALTANGDVWSWGWGGQGLLGHGDQQNQLLPKK 81
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: L1IJ01_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ01_GUITC) HSP 1 Score: 57.8 bits (138), Expect = 7.370e-6 Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 1 Query: 865 GSEHSLSRPTLVDSLVGERITQIAAGQAHSVAVSWKGEAFTWGWGFQHVLGHGDELDRWEP 1047 GS H+ + P V SL G ++ ++A G AH+ V+ G +TWGWG LGHGD+ + P Sbjct: 122 GSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRP 182
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: M1V7F3_CYAM1 (Similar to UVB-resistance protein UVR8 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V7F3_CYAM1) HSP 1 Score: 58.5 bits (140), Expect = 7.880e-6 Identity = 34/106 (32.08%), Postives = 52/106 (49.06%), Query Frame = 2 Query: 614 GEDHTVVVTPGGRALAAGSGRHGVLGASGNINRFLFTEIDFTWQQFPGR---------VP----VAAVACGTRHTLILTAVGTVYSCGLGEYGWLVTAASTASPAL 892 G HT V+ GR + G G++G LG + FL + ++ PG+ +P + AV CG H++ L+A+G VY+CG G YG L + P+L Sbjct: 138 GRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLPWPVSTVQEKVPGQPGNVRRSLAIPSECQIVAVECGYHHSVALSAIGVVYTCGWGAYGQLGHGSCNDEPSL 243
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A0A9P7H8_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9P7H8_ARUDO) HSP 1 Score: 57.4 bits (137), Expect = 8.430e-6 Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 850 RLASNGSEHSLSRPTLVDSLVGERITQIAAGQAHSVAVSWKGEAFTWGWGFQHVLGHGDELDRWEP 1047 +L G EH P LVDSL GER +AG+ HS+A++ KGEA+TWG G LG G +D EP Sbjct: 168 QLGRPGQEHV---PALVDSLSGERPVSASAGRVHSIALTAKGEAWTWGSGRNGRLGLGSSIDEAEP 230
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Match: A0A423TMH5_PENVA (Uncharacterized protein n=7 Tax=Penaeus TaxID=133894 RepID=A0A423TMH5_PENVA) HSP 1 Score: 58.9 bits (141), Expect = 9.350e-6 Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 1 Query: 844 RVRLASNGSEHSLSRPTLVDSLVGERITQIAAGQAHSVAVSWKGEAFTWGWGFQHVLGHGDELDRWEPT 1050 R GS RPTL+ SL G+ I IA GQ HS+AVS G+ +TWGWG LGH D PT Sbjct: 899 RYGQVGTGSTGRYPRPTLLTSLEGKGIVNIACGQFHSMAVSEDGKLYTWGWGVHGQLGHSSVEDVQVPT 967 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14564.3337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14564.3337.1 >prot_L-elsbetiae_contig14564.3337.1 ID=prot_L-elsbetiae_contig14564.3337.1|Name=mRNA_L-elsbetiae_contig14564.3337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp MSYLLHADLVALSTVPPPSPHTTQRSWLSLRRGCVAGLLEKLFEGKPGASback to top mRNA from alignment at L-elsbetiae_contig14564:504..3242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14564.3337.1 ID=mRNA_L-elsbetiae_contig14564.3337.1|Name=mRNA_L-elsbetiae_contig14564.3337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2739bp|location=Sequence derived from alignment at L-elsbetiae_contig14564:504..3242+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14564:504..3242+ >mRNA_L-elsbetiae_contig14564.3337.1 ID=mRNA_L-elsbetiae_contig14564.3337.1|Name=mRNA_L-elsbetiae_contig14564.3337.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1434bp|location=Sequence derived from alignment at L-elsbetiae_contig14564:504..3242+ (Laminarionema elsbetiae ELsaHSoW15)back to top |