mRNA_L-elsbetiae_contig145.3301.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig145.3301.1
Unique NamemRNA_L-elsbetiae_contig145.3301.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 1.070e-183
Identity = 289/360 (80.28%), Postives = 310/360 (86.11%), Query Frame = 1
Query:  430 MATPEPSRSERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGEDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDAIGEEGLMTIPCIVGHMSQLFIDASIASRWANDEDDVVVAGAEVQAAKMNGESATV 1509
            M T   SR +R +KFCIKNVLPLGFFV LV+AL+WPAPGKAV  PKV  +RLVQTINV++IFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITG+VGFVA EIPFDV EFSYGL+VF VVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPF+VK VV AGEDA ID V LLVKL           KVIREAV GAK  VKRFKVRLSLTSSAMLIMVVWQTLSRAQ++LTSVAF QILSVIA+GIGLHLVYLSINYP+C+YILKLKRREFKAVVLMSSQKTLPVSV VIGFL  +G+EGLMTIPCIVGHMSQLF+DA IASRWAND  DV     E + AK NG  +T+
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWAND--DVAAVEDEAEGAKTNGVVSTI 358          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 1.840e-125
Identity = 214/296 (72.30%), Postives = 230/296 (77.70%), Query Frame = 1
Query:  430 MATPEPSRSERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMN-----------------------------------AGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGEDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLV 1212
            M T   SR +R +KFCIKNVLPLGFFVALV+AL+WPAPGKAV  PKV+ +R+VQTINV++IFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITG+VGFVA EIPFDV EFSYGL+VF VVPTTLSSGVTLVMN                                   AGGNDALALLLTVTTNLLGVVTVPF+VK VV AG+DA ID V LLVKL           KVIREAV GAK WVKRFKVRLSLTSSAMLIMVVWQTLSRAQ++LTSVAF QILSVIA+GIGLHLV
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.340e-88
Identity = 162/317 (51.10%), Postives = 213/317 (67.19%), Query Frame = 1
Query:  496 LGFFVALVVALSWPAPGKAVGTPKVEGFR-LVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGED----AKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDAIGEEGLMTIPCIVGHMSQLFIDASIASRW 1431
            +G   A+++ LSWP  G+ VG P    +     T  V+ IFIISGLTLKTDDI+ A+SK+GR G IYG++AILGIT  +GF+   +P    EF+YGL VF  VPTTL+SGV++V  AGGN ALALLLTV TNL  VVT PF++ A+ ++       A ID V LL KL           K++R+ V G K +V R KV+L + ++ ML ++VW T+S A  DL S  F  I  VIA GI +H++YLS+N+P+ ++ LKL   EFKAV +M+SQKTLP+SV +I +L A+G  G MT+PCIVGHMSQLFIDA + S W
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMW 317          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 275 bits (702), Expect = 1.100e-81
Identity = 169/383 (44.13%), Postives = 235/383 (61.36%), Query Frame = 1
Query:  457 ERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRA---GEDAKID------AVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDAI--GEEGLMTIPCIVGHMSQLFIDASIASRWANDEDDVVVAGAEVQAAKMNGESATV*YSIALGGRYHHMEKRLGVGV 1572
            +R+K + IKN L LGF   +V+ALSWP PG+ +G+PK   F + QT  +V+IF ISGLTLKT DIK+AL +       YG++ IL +T  +GFV  +IPF+  EF YGLA+F+ VPTTL+SGVTLV +A GN  +AL+LTVTTN+LGV TVPF + AV+ +   G+    D      A  LL+KL           K  RE V  A  +  ++K  L LT+++ LI +VW ++S ++  L   +   I  ++ AG+ LHL +L++N+ +   ++K+   E +AV+LM+SQKTLPV+V +I +LD    G +GL+ IPCIVGH+SQLFIDA IAS WA  +   +    E  AAK  G  A    S    G     E R+GV  
Sbjct:   17 KRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAA--LAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEID---ERNAAKRAGVGAEEAESKVERGA--SSEARVGVAA 392          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 270 bits (689), Expect = 2.620e-80
Identity = 147/308 (47.73%), Postives = 211/308 (68.51%), Query Frame = 1
Query:  508 VALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGEDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDAIGEEGLMTIPCIVGHMSQLFIDASIASRW 1431
            +AL++ L+WP PG  V +  V  +R+VQT+NV+ +F+ISGL LK+ DI+ A+S+EG  G+I G+V ILG+T   GFVA  +PF  KEF+YGLA+F  VPTT++ GV +   AGGN ALAL+LTV +NLLGV+  PF+++A   +G+D  IDA+DLLV L           + IR  V   +  V R K  L L SS  L ++VWQT+SR+  D+ +V+   I+++IAA + +H+ YL +++   RY+L+L   E KAVV+MSS+KTLPV++ VI FL  +G EGL++IP IV    QLF+D+ IA++W
Sbjct:    1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFF-SGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKW 307          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 267 bits (682), Expect = 8.720e-79
Identity = 152/337 (45.10%), Postives = 216/337 (64.09%), Query Frame = 1
Query:  460 RYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGE----------DAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDAI--GEEGLMTIPCIVGHMSQLFIDASIASRWA 1434
            R+K + ++N L LGF   + + LSWP PG  +G P    F + QT  +V IF ISGLTLKT DIK AL++    G +YG++ ILG+T  +GF+  +IPF+  +F YGLA+F  VPTTL+SGVTLV +A GN ALAL+LTVTTN+LGV TVPF + AV+ +                 A+ LL+KL           K +RE    A+     +KV L L +++ LI +VW ++S+++  L       I  ++ AGI LH+++L++N+ +   +L+L+ +E +AV+LM+S KTLPV+V VI +LD    G  GL+ IPCIVGH+SQLFIDA+IA+RWA
Sbjct:    4 RWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWA 338          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 259 bits (661), Expect = 4.970e-76
Identity = 166/367 (45.23%), Postives = 222/367 (60.49%), Query Frame = 1
Query:  424 LIMATPEPSRSERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGE----------DAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLD--AIGEEGLMTIPCIVGHMSQLFIDASIASRWANDEDDVVVAGAEVQAAKM 1488
            + M   +P  + R KKF + N L LGF +AL + LS PA G  +      G+ +VQTI V+IIFIISG TLKT++I +AL + GR    YG+V+ILG+T  +GF+   IP+   +F YGLA+F  VPTTL+SGVTLV NA GN ALAL+LTV+TNLLGV TVPF+  A+ R+G           D    AVDLLVKL           K+ RE +        + K  L+LT+++ LI+VVW ++S++   L S     I  VI AGI  H+V+L+INY      L +   E  A V+MSSQKTLPV++ VI +LD    G  GL+ IPCI+ H++QLF+DA +A+R A        A A   AAK+
Sbjct:   12 ITMPDTQPLAAARAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYGATG-ALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLAKR----FAAAAAXAAAKL 372          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A4RT86_OSTLU (BASS family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RT86_OSTLU)

HSP 1 Score: 245 bits (626), Expect = 1.510e-71
Identity = 152/328 (46.34%), Postives = 205/328 (62.50%), Query Frame = 1
Query:  472 FCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAG------------EDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFL--DAIGEEGLMTIPCIVGHMSQLFIDA 1413
            F + N L  GF +AL+  LS PA GKA+    V G+ ++QT+ VVIIF+ISG TLKT++I +AL K GR    YG VAILG+T  +GF+   +P+   EF YGLA+F  VPTTL+SGVTLV NA GN ALAL+LTV+TNL+GV TVPF+  AVV +G             D    AV LLVKL           KV RE +     +    K  L+LT+++ LI+VVW ++S++  +L       I +V+ A + +H+V+L+INY    + L L   E  A V+MSSQKTLPV++ +I +L  D  G  GL+ IPCIV H++QLF+DA
Sbjct:    1 FLLDNFLVCGFCLALLFGLSVPAAGKALAKVSVSGWSVIQTVCVVIIFVISGATLKTEEITQAL-KAGRGALGYGWVAILGLTPLLGFILVRVPYKPIEFRYGLALFCCVPTTLTSGVTLVRNAKGNVALALMLTVSTNLIGVFTVPFYFNAVVASGPREMASAVNGAANDMSTQAVKLLVKLLFTILLPIVLGKVAREMIPAVAAFANARKAELTLTNNSCLIIVVWMSISKSAKELIDTNVGTIFAVLFAAVLVHVVFLAINYA-ATHALGLSGPERVACVMMSSQKTLPVAMTIISYLPEDVFGSGGLIAIPCIVCHITQLFMDA 326          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A1Y1IAA6_KLENI (Sodium Bile acid symporter family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAA6_KLENI)

HSP 1 Score: 245 bits (625), Expect = 1.920e-70
Identity = 142/329 (43.16%), Postives = 208/329 (63.22%), Query Frame = 1
Query:  466 KKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRW-GYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAGEDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFLDA-IGEEGLMTIPCIVGHMSQLFIDASIASRWANDED 1446
            ++F I N LPLGF  AL  ALSWP PG+ V + K+   R++Q +N +++F+ISGLTLK++D+KEAL     W G +YG+V IL +T  VGFV  +IPF  +EF+ GL +F  VPTTL  GV LV  + GN ALAL LTV+TN+LG++TVP+ +K  +R      IDA+DL  KL           K      +  + +V+  KV LSL S++ L+++VWQTLS A++ L   +   ++ ++ A IGLH+ YL  N     ++L+L   E  AVV+MSSQK+ PV+V VI ++   I  +GL++IP ++G + Q+F+ ++IA   A   D
Sbjct:   72 RRFVIANFLPLGFLFALAFALSWPQPGREVASWKIGSIRVIQALNNILVFLISGLTLKSNDLKEALKN---WVGVLYGIVTILLVTPCVGFVTQQIPFRPREFTEGLTIFCAVPTTLGVGVALVAASKGNQALALFLTVSTNVLGILTVPYVLKLTLRGSSTISIDALDLFFKLTCTVLVPTLVGKFASSTSSRVRTFVQSHKVALSLFSTSNLVLIVWQTLSGARDILLKQSGGDVMLIVCAVIGLHIFYLGFNVAAV-WLLRLPLVEAIAVVIMSSQKSAPVAVTVITYITPNIATQGLLSIPGLIGQLFQIFLGSAIARVMAKKVD 396          
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Match: A0A1Y5HY24_OSTTA (Cysteine proteinase cathepsin F n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5HY24_OSTTA)

HSP 1 Score: 256 bits (654), Expect = 6.210e-70
Identity = 169/387 (43.67%), Postives = 236/387 (60.98%), Query Frame = 1
Query:  364 AHPAPVRRGALQLQTGVVPPLIMATPEPSRSERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGFRLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSVGFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFFVKAVVRAG------------EDAKIDAVDLLVKLXXXXXXXXXXXKVIREAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILSVIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVIGFL--DAIGEEGLMTIPCIVGHMSQLFIDASIASRWANDEDDVVVAGAEVQAA 1482
            AHP P RR   +    ++PP +     PS + R KKF I N L  GF +AL+  L+ PA GK + + +V  + + QTI VV+IFIISG TLKT++I  AL+  GR  Y+YG V+ILG+T  +GF+A  +P+  +E+ YGLA+F  VPTTL+SGVTLV NA GN ALA++LTV+TNL+GV TVPF+  AVV +G             +    A+ LLVKL           K+ RE+         ++K  L+LT+++ LI+VVW ++S++ ++L S     I +V+ AGI LHLV L INY V  +   +   E  A V+MSSQKTLPV++ +I +L  D  G  GL+ +PCIV H++QLF+DA +AS  A   D  + A     AA
Sbjct:  553 AHPLPSRRTPRR----IMPPAL-----PSAT-RVKKFVIDNFLVCGFSLALLFGLTVPAAGKELASWEVSSWSVTQTICVVVIFIISGATLKTEEISSALAS-GRRAYVYGAVSILGLTPVLGFLAVWLPYKPREYRYGLALFCCVPTTLTSGVTLVRNAKGNVALAMMLTVSTNLIGVFTVPFYYNAVVASGPALSGAVERSLTSEMTKQAIKLLVKLIFTILVPIVFGKLARESWPALSAAATKYKQELTLTNNSCLIIVVWMSISKSSSELKSTDAGTIFAVMFAGIVLHLVMLGINY-VGTHAFGICGPERVASVMMSSQKTLPVAMTIISYLPEDVFGSPGLIAVPCIVCHITQLFMDAPLASHLAIRSDAKLAAAQPPTAA 927          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig145.3301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI1.070e-18380.28Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A6H5KQQ7_9PHAE1.840e-12572.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLX8_9STRA2.340e-8851.10Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
C1E9H5_MICCC1.100e-8144.13Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A836CJ89_9STRA2.620e-8047.73Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A7S0SJ85_9CHLO8.720e-7945.10Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S0Z714_9CHLO4.970e-7645.23Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A4RT86_OSTLU1.510e-7146.34BASS family transporter: sodium ion/bile acid (Fra... [more]
A0A1Y1IAA6_KLENI1.920e-7043.16Sodium Bile acid symporter family n=1 Tax=Klebsorm... [more]
A0A1Y5HY24_OSTTA6.210e-7043.67Cysteine proteinase cathepsin F n=2 Tax=Ostreococc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig145contigL-elsbetiae_contig145:36290..39708 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score537.3
Seed ortholog evalue5.3e-150
Seed eggNOG ortholog2880.D7FQA3
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-01_006880.1
Exons4
Model size2192
Cds size1083
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig145.3301.1prot_L-elsbetiae_contig145.3301.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig145 36719..39028 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.6096761-UTR-L-elsbetiae_contig145:36289..367181622815581.6096761-UTR-L-elsbetiae_contig145:36289..36718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig145 36290..36718 +
1691682972.5274835-UTR-L-elsbetiae_contig145:36289..367181691682972.5274835-UTR-L-elsbetiae_contig145:36289..36718Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig145 36290..36718 +
1622815581.6813922-UTR-L-elsbetiae_contig145:39028..397081622815581.6813922-UTR-L-elsbetiae_contig145:39028..39708Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig145 39029..39708 +
1691682972.5906854-UTR-L-elsbetiae_contig145:39028..397081691682972.5906854-UTR-L-elsbetiae_contig145:39028..39708Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig145 39029..39708 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.6221566-CDS-L-elsbetiae_contig145:36718..371291622815581.6221566-CDS-L-elsbetiae_contig145:36718..37129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 36719..37129 +
1691682972.541644-CDS-L-elsbetiae_contig145:36718..371291691682972.541644-CDS-L-elsbetiae_contig145:36718..37129Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 36719..37129 +
1622815581.6329017-CDS-L-elsbetiae_contig145:37513..376571622815581.6329017-CDS-L-elsbetiae_contig145:37513..37657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 37514..37657 +
1691682972.549969-CDS-L-elsbetiae_contig145:37513..376571691682972.549969-CDS-L-elsbetiae_contig145:37513..37657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 37514..37657 +
1622815581.6488595-CDS-L-elsbetiae_contig145:38203..384301622815581.6488595-CDS-L-elsbetiae_contig145:38203..38430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 38204..38430 +
1691682972.5596366-CDS-L-elsbetiae_contig145:38203..384301691682972.5596366-CDS-L-elsbetiae_contig145:38203..38430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 38204..38430 +
1622815581.6627219-CDS-L-elsbetiae_contig145:38727..390281622815581.6627219-CDS-L-elsbetiae_contig145:38727..39028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 38728..39028 +
1691682972.5738318-CDS-L-elsbetiae_contig145:38727..390281691682972.5738318-CDS-L-elsbetiae_contig145:38727..39028Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig145 38728..39028 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig145.3301.1

>prot_L-elsbetiae_contig145.3301.1 ID=prot_L-elsbetiae_contig145.3301.1|Name=mRNA_L-elsbetiae_contig145.3301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MATPEPSRSERYKKFCIKNVLPLGFFVALVVALSWPAPGKAVGTPKVEGF
RLVQTINVVIIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGSV
GFVAGEIPFDVKEFSYGLAVFSVVPTTLSSGVTLVMNAGGNDALALLLTV
TTNLLGVVTVPFFVKAVVRAGEDAKIDAVDLLVKLIVTVLIPLVIGKVIR
EAVNGAKPWVKRFKVRLSLTSSAMLIMVVWQTLSRAQNDLTSVAFEQILS
VIAAGIGLHLVYLSINYPVCRYILKLKRREFKAVVLMSSQKTLPVSVVVI
GFLDAIGEEGLMTIPCIVGHMSQLFIDASIASRWANDEDDVVVAGAEVQA
AKMNGESATV*
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mRNA from alignment at L-elsbetiae_contig145:36290..39708+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig145.3301.1 ID=mRNA_L-elsbetiae_contig145.3301.1|Name=mRNA_L-elsbetiae_contig145.3301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3419bp|location=Sequence derived from alignment at L-elsbetiae_contig145:36290..39708+ (Laminarionema elsbetiae ELsaHSoW15)
CCTTTGCCCTCCCTTTGGCACAGAGTTACACAGAGCTGAGCTGTGGAGAG GCACACCAGCGAACAGCAGAAAAGCGGAGGGTTTCATCACACGAAGAGGC TGATAGACACAACATCTTCAGAATCGCGCTACGACCGCGGGTCAAGTACG TAGCAGTCACGTAGTAGGTACGCCGCAACGTCACTCGCCTCCTGGGCCTA GACAACGGGCGAGGGGACTGCTGCTATTGCCAGGGCCAGCAAGCACGGAA CTATCGTGCGCGAGGTAGCCGTTGTGAGCGAGCTCCGCTAGCATCAGTGT GCTGCCAGGTTCCGTGCTGTACCCGCCGCCGATAACTAAACGTGGTGAAT AAATCATAAATCAGCACACCCCGCTCCTGTTCGCCGAGGAGCTCTGCAGC TTCAAACAGGCGTCGTACCGCCGCTCATCATGGCAACGCCCGAACCGTCA CGGTCGGAGCGTTACAAGAAGTTTTGCATAAAAAACGTCCTCCCCCTGGG CTTCTTCGTGGCGTTGGTGGTCGCCCTCTCGTGGCCGGCGCCGGGGAAAG CCGTGGGAACGCCGAAGGTCGAGGGCTTCCGTCTCGTCCAGACCATCAAC GTCGTGATCATCTTCATTATCTCCGGCCTGACCCTGAAGACCGACGATAT AAAAGAGGCCCTGAGCAAGGAAGGAAGATGGGGTTACATCTACGGGGTAG TGGCTATCTTGGGCATCACGGGCAGCGTGGGTTTCGTCGCGGGGGAGATT CCATTCGACGTGAAGGAGTTCTCGTACGGCCTGGCGGTATTCAGCGTCGT GCCCACCACGCTGTCCTCGGGAGTGACCCTGGTCATGAATGTAAGCGAAG GGTACAATGAGCGCGACACCGCCGCAGTTGAGTATATATCTAATGAAGGG GCAGTTTCTTCAGCGGGAGAGGGTAAGCGTATGATGCACTTGCCAGGCGC GCAGCTGGTACCCGGTACAAGTGCAAGGAGGGACAGAGGCTTTGACGCCT ACACACATACTCACTCCCGTCGTCCACCCGTAGTCTCCACAACCGTGCTT GGTAGTCGACGGGTTCCGTTGTTTGGCCACGGGTCTTGTCAAACGAGCCT ACAACCGTGGACACCTGCTTTGACAACGTTAGCCGTCCTGTCATTTTTCG CCTCCGCTGCAGCATTATTTTGTCGTAATTTGACGCCCCGCCCCCACGCA ATTACAAACGCTTTTTTCGCACAGGCTGGGGGTAACGATGCGTTGGCGCT GCTGCTGACTGTAACAACCAACTTGCTCGGAGTTGTGACGGTTCCGTTTT TCGTCAAGGCCGTGGTCAGAGCTGGGGAAGATGCGAAAATCGACGCCGTG GACCTCCTCGTAAAGCTGGTGAGGAATGGAGGGAAGGAGGGAGAGGCACA ATAGTGTCACCCTTGGTGACGGCGACGGGCCGACTACGGGGATACGGGTA GCACCAGGTTTTCTAGAACTTCTGTTGCCCGTCCTGCTGTGTGCATGACA TACTTTTTTTTTCGTTCAGCCAGGTTTACACGGTGAGGTAACGTCCCGCA CTCTTTGTTTATTTCGAACGGCAACAGCAGTTGTAGCCGCATCATGGGTA GGTTGGTTGCCTTTTCCCTTCACGCACACCACCACACAAAAACACATATT ATCCACACAAGCATCGCCCATCCACGACCGCACGCAGACACGATCTCGGT TCTGGATCTGCCGTTCTGGTGACCAAGCCGAGGAAAAATACAGACGGTGC TGAGAGGTGGGGCTTGTCCGAAAGAAGGCAAAACCTGCCTCACGCGTAGC TACATAGGTAGTAGCATTCCGCTTCTTGCTTGCATACCGCTTCTGCAATA TGTAGCCGCTGACGCTGAGTGGGCGTGCACCCTCTTGTTGCTCGTTTTTT TGGTGCGCATCTAGATCGTCACGGTACTAATTCCGCTGGTGATCGGGAAG GTGATCCGGGAGGCCGTCAACGGGGCAAAGCCCTGGGTGAAGCGGTTCAA GGTGCGGCTGAGCCTGACGAGCAGCGCGATGCTCATCATGGTGGTATGGC AGACTTTGAGCAGGGCGCAGAACGACCTAACTTCGGTGGCGTTCGAGCAG ATATTGTCCGTCATCGCCGCGGGCATCGGTCTGCACCTCGTGTGAGTTTG TTGTCGGCGAACAATGTCAGCCGAGGTGTGAAATGAGTCTTGCAATTCCT TTCTTGTTTTGGGGGGTTCGACCTAGATACTTGTTTGAGAGGATGGTGGA TACATCGGAGAACAAGGGGGGGTGGGTCACTGGCTTGCATACACGTTTTG AAAGGGTTGTGAGCGACGTTGTGTGCATTTCCCGAGCCTCATGTACTTCG AAGTAGAAATAAACATCAATGGATGTTGCTGTAATTGACAAACCTCTTTG CCGCACCTGTATGCCCCGGCTTTTCCCTCTCCAATCAGGTACCTGAGCAT AAACTACCCCGTCTGTCGGTACATTCTCAAGCTCAAGCGCCGAGAGTTCA AGGCGGTAGTGCTCATGAGCTCGCAGAAGACGTTGCCAGTGTCGGTGGTT GTCATCGGCTTCCTCGACGCCATCGGAGAGGAGGGGCTCATGACGATACC GTGCATCGTTGGGCACATGTCACAGCTCTTTATCGACGCTTCCATTGCCT CGAGATGGGCTAACGACGAAGACGACGTGGTAGTAGCGGGGGCAGAAGTG CAGGCGGCGAAGATGAATGGGGAGAGCGCTACGGTTTGATACTCGATTGC TCTGGGTGGCCGGTACCACCATATGGAGAAGAGGCTCGGGGTTGGTGTTA GGTCATCACCGTTTCGGAACTTGACAAGCACATGGCACAAGAGTCTGCCG CGGTTTCCATGTAAAATGGTGATGATGTGGGACCTCCGTGTGATTTGAAT GCTTGTTTTTACTCGCAGGCGTGCACTGGCGGCGGCGTGCGATGCGTAGA TGAATGAAGCGTTTGCTAACACACTTTATTGCGTGTCTCTAGTATGTAGT GCAGATATTTCGAGCAGCAACAGCGTGGTTTCGACCCGTACCCGCGCAAG GTGGGCAAGAACAGGCCAATGGAAGCCGCAGAAAGAGAGTGTGTTGTGTT TTTGGGACATTTCGGTTCGCGAACAATAATACGCTTTGAGTTACCCTCCC CATCACCTCTTCGGCCAAAAAACACATTTATTTAGTTGCCCCGGAGTGTT GTGTATTTTTTTCGAAACATCTCTCCCCTCTTGTTTCGCAGTAATTTCTT CATCGTTTTTCGAATATATGTGCTGGCTTCACAGCGCATCAAAATAGAGC ACACCTGGGCACAACACTTCATGCTTCTCCCCTCCTTTAACTGTTTCTCG TAGAGGCTAGATCCATCGCGGTTCTGTGTAAATTGCTTGTGCGTGGCCAG ATAATGTTTTGCTTCCCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig145:36290..39708+

>mRNA_L-elsbetiae_contig145.3301.1 ID=mRNA_L-elsbetiae_contig145.3301.1|Name=mRNA_L-elsbetiae_contig145.3301.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2166bp|location=Sequence derived from alignment at L-elsbetiae_contig145:36290..39708+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAACGCCCGAACCGTCACGGTCGGAGCGTTACAAGAAGTTTTGCAT
AAAAAACGTCCTCCCCCTGGGCTTCTTCGTGGCGTTGGTGGTCGCCCTCT
CGTGGCCGGCGCCGGGGAAAGCCGTGGGAACGCCGAAGGTCGAGGGCTTC
CGTCTCGTCCAGACCATCAACGTCGTGATCATCTTCATTATCTCCGGCCT
GACCCTGAAGACCGACGATATAAAAGAGGCCCTGAGCAAGGAAGGAAGAT
GGGGTTACATCTACGGGGTAGTGGCTATCTTGGGCATCACGGGCAGCGTG
GGTTTCGTCGCGGGGGAGATTCCATTCGACGTGAAGGAGTTCTCGTACGG
CCTGGCGGTATTCAGCGTCGTGCCCACCACGCTGTCCTCGGGAGTGACCC
TGGTCATGAATATGGCAACGCCCGAACCGTCACGGTCGGAGCGTTACAAG
AAGTTTTGCATAAAAAACGTCCTCCCCCTGGGCTTCTTCGTGGCGTTGGT
GGTCGCCCTCTCGTGGCCGGCGCCGGGGAAAGCCGTGGGAACGCCGAAGG
TCGAGGGCTTCCGTCTCGTCCAGACCATCAACGTCGTGATCATCTTCATT
ATCTCCGGCCTGACCCTGAAGACCGACGATATAAAAGAGGCCCTGAGCAA
GGAAGGAAGATGGGGTTACATCTACGGGGTAGTGGCTATCTTGGGCATCA
CGGGCAGCGTGGGTTTCGTCGCGGGGGAGATTCCATTCGACGTGAAGGAG
TTCTCGTACGGCCTGGCGGTATTCAGCGTCGTGCCCACCACGCTGTCCTC
GGGAGTGACCCTGGTCATGAATGCTGGGGGTAACGATGCGTTGGCGCTGC
TGCTGACTGTAACAACCAACTTGCTCGGAGTTGTGACGGTTCCGTTTTTC
GTCAAGGCCGTGGTCAGAGCTGGGGAAGATGCGAAAATCGACGCCGTGGA
CCTCCTCGTAAAGCTGGCTGGGGGTAACGATGCGTTGGCGCTGCTGCTGA
CTGTAACAACCAACTTGCTCGGAGTTGTGACGGTTCCGTTTTTCGTCAAG
GCCGTGGTCAGAGCTGGGGAAGATGCGAAAATCGACGCCGTGGACCTCCT
CGTAAAGCTGATCGTCACGGTACTAATTCCGCTGGTGATCGGGAAGGTGA
TCCGGGAGGCCGTCAACGGGGCAAAGCCCTGGGTGAAGCGGTTCAAGGTG
CGGCTGAGCCTGACGAGCAGCGCGATGCTCATCATGGTGGTATGGCAGAC
TTTGAGCAGGGCGCAGAACGACCTAACTTCGGTGGCGTTCGAGCAGATAT
TGTCCGTCATCGCCGCGGGCATCGGTCTGCACCTCGTATCGTCACGGTAC
TAATTCCGCTGGTGATCGGGAAGGTGATCCGGGAGGCCGTCAACGGGGCA
AAGCCCTGGGTGAAGCGGTTCAAGGTGCGGCTGAGCCTGACGAGCAGCGC
GATGCTCATCATGGTGGTATGGCAGACTTTGAGCAGGGCGCAGAACGACC
TAACTTCGGTGGCGTTCGAGCAGATATTGTCCGTCATCGCCGCGGGCATC
GGTCTGCACCTCGTGTACCTGAGCATAAACTACCCCGTCTGTCGGTACAT
TCTCAAGCTCAAGCGCCGAGAGTTCAAGGCGGTAGTGCTCATGAGCTCGC
AGAAGACGTTGCCAGTGTCGGTGGTTGTCATCGGCTTCCTCGACGCCATC
GGAGAGGAGGGGCTCATGACGATACCGTGCATCGTTGGGCACATGTCACA
GCTCTTTATCGACGCTTCCATTGCCTCGAGATGGGCTAACGACGAAGACG
ACGTGGTAGTAGCGGGGGCAGAAGTGCAGGCGGCGAAGATGAATGGGGAG
AGCGCTACGGTTTGAGTACCTGAGCATAAACTACCCCGTCTGTCGGTACA
TTCTCAAGCTCAAGCGCCGAGAGTTCAAGGCGGTAGTGCTCATGAGCTCG
CAGAAGACGTTGCCAGTGTCGGTGGTTGTCATCGGCTTCCTCGACGCCAT
CGGAGAGGAGGGGCTCATGACGATACCGTGCATCGTTGGGCACATGTCAC
AGCTCTTTATCGACGCTTCCATTGCCTCGAGATGGGCTAACGACGAAGAC
GACGTGGTAGTAGCGGGGGCAGAAGTGCAGGCGGCGAAGATGAATGGGGA
GAGCGCTACGGTTTGA
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