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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 423 |
Cds size | 375 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815580.5463428-UTR-L-elsbetiae_contig14477:1309..1357 | 1622815580.5463428-UTR-L-elsbetiae_contig14477:1309..1357 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14477 1310..1357 - |
1691682971.8375442-UTR-L-elsbetiae_contig14477:1309..1357 | 1691682971.8375442-UTR-L-elsbetiae_contig14477:1309..1357 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14477 1310..1357 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815580.5644903-CDS-L-elsbetiae_contig14477:1357..1658 | 1622815580.5644903-CDS-L-elsbetiae_contig14477:1357..1658 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14477 1358..1658 - |
1691682971.8520963-CDS-L-elsbetiae_contig14477:1357..1658 | 1691682971.8520963-CDS-L-elsbetiae_contig14477:1357..1658 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14477 1358..1658 - |
1622815580.577068-CDS-L-elsbetiae_contig14477:3394..3468 | 1622815580.577068-CDS-L-elsbetiae_contig14477:3394..3468 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14477 3395..3468 - |
1691682971.8630142-CDS-L-elsbetiae_contig14477:3394..3468 | 1691682971.8630142-CDS-L-elsbetiae_contig14477:3394..3468 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14477 3395..3468 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14477.3293.1 >prot_L-elsbetiae_contig14477.3293.1 ID=prot_L-elsbetiae_contig14477.3293.1|Name=mRNA_L-elsbetiae_contig14477.3293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
DQHRGKRAATGLPKTELCGAESEARHTHSNQRIFEEAQVGSFPASRQVGR QQQRRRTSAQRDGVPQQGGRGRLPSRPHGEGDRRFRVRRPTHDHGIGIGI GIGIPAVRRGRRRRHRRRREDSER* back to topmRNA from alignment at L-elsbetiae_contig14477:1310..3468- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14477.3293.1 ID=mRNA_L-elsbetiae_contig14477.3293.1|Name=mRNA_L-elsbetiae_contig14477.3293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2159bp|location=Sequence derived from alignment at L-elsbetiae_contig14477:1310..3468- (Laminarionema elsbetiae ELsaHSoW15) GATCAACACAGGGGGAAGCGAGCTGCCACTGGGCTGCCAAAGACAGAGCT
TTGTGGTGCGGAATCAGAGGCAAGGTGATTGTTTGTGTTGATAGAATCGC
ACGCAGAGTATTGCGTCGTAAGTGTTCATGAGACATGAGACATGAGACCG
CAGGGTATAATTGTAGTGTGACTGCTGGTGTGTGCATGTGCTGCACCCGC
AGCCGCTGGTTGTAGCCGTCCAGCGCCTTGGGCACGCAGCAAAAGCATGA
AAAGTCGTGTGAAAATAGTGGTTCGGGTTGACGCACGACTGCTATTTTTT
TGTTTTTTCGTTTTTTGCGGCCATCAGATGAGGCGTCGTGTGTCTGCTCC
TGTGTGTAAACACATGACGCAAGATAGGCACCCCCTGGACCGATTTTCAA
AGCTCGGTTACTCCGCAACGAGTATGTTTTTTAAGACCAGACGACACGTT
TTTGGGCAGCTCTTGATGAGATCTTTCTAACGCCACCGTTTTCGGGACTG
CAACTCCTCTCGATGTCGAGTACTTGAGCTTTGAAAATCGGTCCGGGGGG
TGTGTTATCTTGTGTCACCTACGGTAGAGTCTACATACCGCTGCTGCTGT
ACATTGATATCTTAGGACGCACCACCTTCACGCTGAATTACTGCTGCTGC
TGTACATTGATATCTTAGAACGCGCCACCTGCACGCTGAATTTTGTAGTT
CAACGCCCACCACCGCGGTGTGTGTGTGTTGCTGGTTCAAGACACGAAGC
CAGGGGTAGATTCGGACGCCGCTTCCCGTATCAAGCACAGAGCCTAACGT
CTCAAAAGTCTACCGCAGATAGGTTCGAAGTTAGTTCAGATACATAGAAG
TACTTAACTCTGCTGCTTTTGAGTACGCTTCAGCAAGAGCAGAAGTTGGT
AGTCGTACATGGTACAAGCTTTATTGTACTTTATCTATCATGCAAAGCCC
AGAGCGGAAGCATGTCCATGCACCCCTCCCCAAAGCACACACACACACAC
ACACACACACACACATTGAGCTCGACAGGCCATCGCAACCACGTGCTTCA
GAGGAAGATGCATCCCTTATCCTTAAGTGGCCGCCTGTACATACATGTAA
ATAGGCTTATGTCATCGGATGTGAGTGTCGATGGGTATGTAAGACCAAGA
TTATTACCGTAGGTAACACAAGATACCACACACCCTGGATCGAATTTTAG
AGCTCGATTACTCCGTAACGAAGAAGGCGCCAGCTCCAAATAACACATTT
TCGAACAGCCCTCGACTAGATCTTTCTAACGCCACCCCTTTCGACACTGT
CATTCTTCTCGCTGGGGAGGAATCGAGCTTTGAAAATCTGTCCAGGGGGT
GTGGTATCTTGTGTTACCTACGGTACTATGCCACAGGTAAGGAGACTGAC
TGCTGTAGGATACACGTGTAGGTGTGCTGCGGTCTGTCGTTTCTTGGAAA
GTGGCTGCAACTGCTCGTTCTGAAGAGGAAAAGACTCTCTCTCTAAGACG
GGTATGTGCAACAAGAGTCATTTGAAAGACAAATCAGTTTTTTTTTTTGT
CTCTGTAATCAAAAACGGAACCTAACCCACAATGAGACGGGGCCCCGTGG
GCCTTTATATTCATCCCGGTCGGTCGACGAGGTCTCTGCAGGATCCTGCA
CGATATACTCTATCTGGAGTTCTACGCTCCCACACGACACGCGACTGCCG
CATCAGATGAAGAATTCCCTCCTAGAATCTGCATTTACCTCGCCGCCGCC
GCCGCCGCCGCCCCACGTAACACAACGTCTGCCCATCCTCACCATCACCC
CCGGGGGAAGGCACACGCACAGCAACCAGAGAATCTTCGAGGAAGCGCAA
GTAGGTTCGTTCCCGGCAAGCAGGCAAGTAGGCAGGCAGCAGCAGCGGCG
ACGAACAAGCGCGCAGAGGGATGGTGTTCCTCAGCAAGGCGGCCGCGGCC
GCCTGCCTAGCCGCCCTCACGGCGAGGGAGACCGACGCTTTCGGGTTCGG
CGTCCGACCCACGACCACGGCATCGGCATCGGCATCGGCATCGGCATCCC
TGCTGTCCGCCGAGGCCGCCGCCGCCGCCACCGCCGCCGCCGTGAGGACA
GCGAGCGGTAGCAGCGGGGGGGCCGGCCGCGGAATGAGCATGTACTCGGC
CTTCAAGAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14477:1310..3468- >mRNA_L-elsbetiae_contig14477.3293.1 ID=mRNA_L-elsbetiae_contig14477.3293.1|Name=mRNA_L-elsbetiae_contig14477.3293.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig14477:1310..3468- (Laminarionema elsbetiae ELsaHSoW15) GATCAACACAGGGGGAAGCGAGCTGCCACTGGGCTGCCAAAGACAGAGCT TTGTGGTGCGGAATCAGAGGCAAGGATCAACACAGGGGGAAGCGAGCTGC CACTGGGCTGCCAAAGACAGAGCTTTGTGGTGCGGAATCAGAGGCAAGGC ACACGCACAGCAACCAGAGAATCTTCGAGGAAGCGCAAGTAGGTTCGTTC CCGGCAAGCAGGCAAGTAGGCAGGCAGCAGCAGCGGCGACGAACAAGCGC GCAGAGGGATGGTGTTCCTCAGCAAGGCGGCCGCGGCCGCCTGCCTAGCC GCCCTCACGGCGAGGGAGACCGACGCTTTCGGGTTCGGCGTCCGACCCAC GACCACGGCATCGGCATCGGCATCGGCATCGGCATCCCTGCTGTCCGCCG AGGCCGCCGCCGCCGCCACCGCCGCCGCCGTGAGGACAGCGAGCGGTAGG CACACGCACAGCAACCAGAGAATCTTCGAGGAAGCGCAAGTAGGTTCGTT CCCGGCAAGCAGGCAAGTAGGCAGGCAGCAGCAGCGGCGACGAACAAGCG CGCAGAGGGATGGTGTTCCTCAGCAAGGCGGCCGCGGCCGCCTGCCTAGC CGCCCTCACGGCGAGGGAGACCGACGCTTTCGGGTTCGGCGTCCGACCCA CGACCACGGCATCGGCATCGGCATCGGCATCGGCATCCCTGCTGTCCGCC GAGGCCGCCGCCGCCGCCACCGCCGCCGCCGTGAGGACAGCGAGCGGTAG back to top
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