mRNA_L-elsbetiae_contig1444.3276.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: D7G779_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G779_ECTSI) HSP 1 Score: 253 bits (645), Expect = 5.370e-80 Identity = 118/130 (90.77%), Postives = 124/130 (95.38%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDAPLHTIDMHVKHHD 390 MATRGVFQLRK+T+KYCDHSGSSKGAREFIR RIVEFANNTPAAEV TELRPG+HPYIMGDYVTGEVKTIGIKNI PGEIMDYA+MLRNSSG KVRK KKPVESRYPSIQGVWDIDAPLHT D+HV+HHD Sbjct: 1 MATRGVFQLRKLTLKYCDHSGSSKGAREFIRHRIVEFANNTPAAEVVTELRPGKHPYIMGDYVTGEVKTIGIKNIAPGEIMDYAMMLRNSSGHKVRKFKKPVESRYPSIQGVWDIDAPLHTTDIHVEHHD 130
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A835ZEX9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX9_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.670e-34 Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDAPLHTIDMHVKH 384 MATRGV QL++I ++YCD GSS+G R+FI R +V FA P E+ TE+R +HP I DY+TG KT+G+KN P I D+ LR ++GRK R+ KPV SR PS+QG WD + + V+H Sbjct: 1 MATRGVMQLQRIHIRYCDWGGSSQGMRDFIGRELVAFAKAVPHCEIITEVRRNRHPIIRADYLTGIPKTLGVKNEAPSAIRDFLHRLRTTTGRKQRRFDKPVVSRLPSVQGAWDPEVAYQAMRTTVRH 128
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A024G7B8_9STRA (L51_S25_CI-B8 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7B8_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.810e-30 Identity = 55/117 (47.01%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFI-RRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDID 348 MATRG++QL+++T++YC HSGSS+ R+F+ ++ +EF P TEL+PG+HP ++GDYVT + K +KN IM LR+SSGRK+ K+K+PV ++ PSIQG+W D Sbjct: 1 MATRGIWQLKEVTIRYCQHSGSSRHVRDFLSNKQFLEFVKENPQVSFRTELKPGRHPVLIGDYVTNQQKVCDVKNKEQKVIMLQLQRLRDSSGRKMTKMKRPVITKCPSIQGIWQQD 117
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: F0WUQ8_9STRA (Uncharacterized protein AlNc14C277G10065 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUQ8_9STRA) HSP 1 Score: 122 bits (306), Expect = 7.550e-30 Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIR-RRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDID 348 MATRG++QL+++T++YC HSGSS+ R+F+ ++ ++F P TEL+PG+HP ++GDYVT E K +KN IM LR+SSGRK+ ++K+P+ S+ PSIQG+W D Sbjct: 1 MATRGIWQLKELTIRYCQHSGSSRYIRDFLNNKKFIDFVKENPQVAFRTELKPGRHPVLIGDYVTNEQKVCDVKNKEEKWIMLQLQRLRDSSGRKMTRMKRPIISKRPSIQGIWQQD 117
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S3V4V6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4V6_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.630e-28 Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRR-IVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 339 MATRGV QL K+ V +C+H GSS RE+I+ IV+FA + P EV +LR G+HPYI +Y+TG K + +KN P I D ML NSSGRK+ K+ PV + PS+QGVW Sbjct: 12 MATRGVKQLAKLRVVFCEHGGSSNLVREYIKTGGIVQFATDNPTVEVEAKLRNGKHPYIKAEYITGFSKQVCVKNEPLERIQDVMTMLNNSSGRKISKIGNPVRTDTPSVQGVW 125
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A9S2L6_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S2L6_PHYPA) HSP 1 Score: 117 bits (293), Expect = 4.170e-28 Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 339 MA RGV+QL+K+ V +CDHSGSS GAREF+ R N P EVAT+L PGQHPY+ G Y+ + + +KN EI+ A+ LRNS+GRKV KLK + PS+QG W Sbjct: 1 MAVRGVWQLQKLIVCFCDHSGSSAGAREFVARIFPTLQKNNPQFEVATQLVPGQHPYLRGLYLNKNDRVVDVKNKNAEEILTQAMRLRNSTGRKVVKLKTRHVTFNPSVQGSW 113
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: H3GM96_PHYRM (L51_S25_CI-B8 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GM96_PHYRM) HSP 1 Score: 115 bits (289), Expect = 2.080e-27 Identity = 56/121 (46.28%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIR-RRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW--DIDAP 354 MAT+GV+QL+++T++YC H GSS+ R+ + R ++F P + TEL+ +HP ++GDYVT E K IKN I+D LRNSSGRK+ +KKPV S+ P+IQG+W D+D P Sbjct: 1 MATKGVWQLKQVTIRYCQHGGSSRHVRQLLGDERFLKFVEANPQVQFETELKGARHPVLIGDYVTNERKVSDIKNQDIPFILDQLERLRNSSGRKMTHIKKPVISKRPTIQGIWQPDLDFP 121
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S1GKP3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GKP3_CYCTE) HSP 1 Score: 115 bits (287), Expect = 4.630e-27 Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRR-RIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 339 MATRGV+QL ++ + YC+H GSS+ R++I RIV++A + P EV +R G+HP I G+Y+TG+ K I +KN I ML NSSGRK++KLK+ V ++ PS+QGVW Sbjct: 1 MATRGVYQLARLRLVYCEHGGSSRTIRDYISSGRIVQWAKDHPHVEVEVHVRNGKHPLIEGEYLTGQPKQITVKNQTMERIQQVVDMLHNSSGRKIKKLKRTVVTQTPSVQGVW 114
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A6P3YX15_ZIZJJ (54S ribosomal protein L51, mitochondrial n=2 Tax=Rosales TaxID=3744 RepID=A0A6P3YX15_ZIZJJ) HSP 1 Score: 114 bits (285), Expect = 5.750e-27 Identity = 55/117 (47.01%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVWDIDA 351 MA RGV+QL+K+ V YCD GSS+G R F+ + F P EV TEL GQHP++ G Y + I +KN+ P EI YA LRNS GRKV KL+ +++PS+QG W D Sbjct: 1 MALRGVWQLQKLIVNYCDWGGSSRGIRAFMESHLPAFKEKNPQLEVVTELIRGQHPHLKGLYGNKNQRVICVKNMDPDEIFQYATRLRNSLGRKVVKLRTRHVTKHPSVQGTWTTDV 117
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Match: A0A7S0APD8_9STRA (Hypothetical protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0APD8_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.220e-27 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 1 MATRGVFQLRKITVKYCDHSGSSKGAREFIRR-RIVEFANNTPAAEVATELRPGQHPYIMGDYVTGEVKTIGIKNIPPGEIMDYALMLRNSSGRKVRKLKKPVESRYPSIQGVW 339 MATRGV QL+K+T+ YC+H GSS+ R+FI RIV++A P +V+ E+R G HP ++G Y+TG K + +KN P I ML +SSGRK+ +L P++++ PS+QG+W Sbjct: 1 MATRGVKQLQKLTLAYCEHGGSSRHIRDFISSGRIVDYAKANPTVQVSVEVRNGHHPALVGKYLTGWDKQVCVKNEPIKRIYKVVQMLNDSSGRKMNRLDGPIQTQTPSVQGIW 114 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1444.3276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1444.3276.1 >prot_L-elsbetiae_contig1444.3276.1 ID=prot_L-elsbetiae_contig1444.3276.1|Name=mRNA_L-elsbetiae_contig1444.3276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MATRGVFQLRKITVKYCDHSGSSKGAREFIRRRIVEFANNTPAAEVATELback to top mRNA from alignment at L-elsbetiae_contig1444:13281..16591- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1444.3276.1 ID=mRNA_L-elsbetiae_contig1444.3276.1|Name=mRNA_L-elsbetiae_contig1444.3276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3311bp|location=Sequence derived from alignment at L-elsbetiae_contig1444:13281..16591- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1444:13281..16591- >mRNA_L-elsbetiae_contig1444.3276.1 ID=mRNA_L-elsbetiae_contig1444.3276.1|Name=mRNA_L-elsbetiae_contig1444.3276.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig1444:13281..16591- (Laminarionema elsbetiae ELsaHSoW15)back to top |