mRNA_L-elsbetiae_contig1442.3265.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: D8LDP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDP4_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.990e-73 Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 1 Query: 55 MKLFAFLLVVLVGAAQAFVAPSAFKGTAMTSPRATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 MKLFAFLLVVL+GAA AFV+PSAFKG+A+ +PRATRAT SKVSATPVMLDTYWEGK+PPSEVLGPALAKAPS GLG+VSL AFAAGTYCIHETNILHTVSPDNIQP YVAGALLVPISWGLHVASWIQKQNGK Sbjct: 1 MKLFAFLLVVLIGAASAFVSPSAFKGSALAAPRATRAT-SKVSATPVMLDTYWEGKAPPSEVLGPALAKAPSAGLGVVSLAAFAAGTYCIHETNILHTVSPDNIQPLYVAGALLVPISWGLHVASWIQKQNGK 132
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A836C871_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C871_9STRA) HSP 1 Score: 127 bits (318), Expect = 8.500e-32 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 76 LVVLVGAAQAFVAPSAFKGTAMTSPRATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 L + + A AF+APS A S A + T DTYWEGK+PPS+VLGP +++ PS LG++SL+ GTY +HE+NI HT++ D I P Y+ G+LL P++WG HVASWIQKQNGK Sbjct: 11 LAMALATASAFMAPSPVMHKAARSAGALKMTE----------DTYWEGKAPPSKVLGPVVSQIPSPALGVISLICLGVGTYSVHESNIFHTLTADTINPGYIIGSLLTPVAWGTHVASWIQKQNGK 126
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A7S1U023_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U023_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.650e-30 Identity = 63/114 (55.26%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 109 VAPSAFKGTAMTSPRATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNG 450 VAP+A A +PRA R S + TYWEGK PPS VLGP L+K PS LG VS+++ AGTY +HE+NILHT++ D + P +V G+LLVPISWGLHVA+WI K+NG Sbjct: 14 VAPAAAFAPARKAPRAMR---SSLKMEQTEAPTYWEGKVPPSTVLGPVLSKTPSGLLGPVSIISLLAGTYSVHESNILHTLNADTVYPVFVIGSLLVPISWGLHVAAWINKENG 124
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A4D9DAY0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAY0_9STRA) HSP 1 Score: 120 bits (300), Expect = 3.810e-29 Identity = 69/134 (51.49%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 55 MKLFAFLLVVLVGAAQAFVAPSAFKGTAMTSPRATRATTSKVSATPVMLD-TYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 MK F LLV++ F SAF A A ++ A +M D TYWEGK+P S VLGP LAK PS LG SLVA G YC+HE+NI + ++ D+I PAYV G+ L PISWG+HVA+WIQKQNGK Sbjct: 1 MKTFGALLVLMA----LFGLSSAFMPKAPVHKVAAAPVVARGRAMKMMEDSTYWEGKAPSSAVLGPFLAKVPSGVLGPASLVALMVGAYCVHESNIFNILTVDSINPAYVLGSFLTPISWGMHVAAWIQKQNGK 130
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A7S2S169_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S169_9STRA) HSP 1 Score: 103 bits (258), Expect = 6.300e-23 Identity = 67/135 (49.63%), Postives = 81/135 (60.00%), Query Frame = 1 Query: 55 MKLFAFLLVVLV-GAAQAFVAPSAFKGTAMTSPR-ATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 MKLF L +LV G A AF PS +PR RA + + DTYWEGK+PPS VLGP L+K S LGL SL A G+YC + N+ S ++ P +V GA L+PISWGLHVASWIQK+NGK Sbjct: 22 MKLFGVLSTLLVLGMASAFT-PSPMAR----APRFVARAGRQQQQVVRMAEDTYWEGKAPPSTVLGPVLSKTNSGLLGLTSLAFLAVGSYCAVQNNLF---SLPDVNPLFVLGANLLPISWGLHVASWIQKENGK 148
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A7S2DS21_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DS21_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.370e-21 Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 55 MKLFAFLLVVLVGAAQAFVAPSAFKGTAMTSPRATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 MKL F L + GA AFV T+PR + T S A+ M DTYWEG PPS VLGP L+K+ S LG+ SL+AF+ G + + + I T I P + A +L+PISWGLHVASWIQK+NGK Sbjct: 21 MKLLMFFLTL--GAVSAFVP--------RTAPRFVQQTRSVQKASVRMEDTYWEGNFPPSNVLGPLLSKSSSGVLGIGSLLAFSGGAFGL-SSQIALTSQQLQISPLFCAMTVLIPISWGLHVASWIQKENGK 142
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A1X6NZL8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZL8_PORUM) HSP 1 Score: 97.1 bits (240), Expect = 1.460e-20 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 151 RATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLV-SLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 R +RAT + A + +DTYWEGK+PPS VLG L K GL L+ S+++ A G+Y ++++N+ ++P ++ Y+ +LL PISWGLHVASWIQKQN K Sbjct: 35 RPSRATVTPAGARSLRMDTYWEGKAPPSTVLG--LGKNVPSGLYLLASVLSLALGSYGVYKSNLASPLTPSTVEAQYILASLLAPISWGLHVASWIQKQNNK 134
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A2V3IUA9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA9_9FLOR) HSP 1 Score: 94.7 bits (234), Expect = 8.350e-20 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 190 PVMLDTYWEGKSPPSEVLGPALAK-APSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 PV + TYWEG+ PPSE+LG L K PS S +A G YC++++N+++ +S +++ P ++ G+LLVPISWGLHVA WIQ +N K Sbjct: 41 PVRMSTYWEGEYPPSEILG--LGKDVPSSLFVFSSAIALLLGCYCVYQSNLINPLSSESVNPQFIVGSLLVPISWGLHVAGWIQGKNNK 127
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: M2Y646_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y646_GALSU) HSP 1 Score: 94.4 bits (233), Expect = 1.360e-19 Identity = 46/89 (51.69%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 187 TPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 T V DT+W GK PPS VLG K PS + S+V G+YC++E+N+L ++ I P YV G+LLVP SWGLHVA WIQ +NGK Sbjct: 46 TVVAKDTFWTGKVPPSTVLGIG-EKVPSAAYIISSVVCLLVGSYCVYESNLLSPLTVTTINPLYVLGSLLVPYSWGLHVAGWIQLKNGK 133
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Match: A0A7S2CAL6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAL6_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.680e-18 Identity = 61/137 (44.53%), Postives = 76/137 (55.47%), Query Frame = 1 Query: 46 PSNMKLFAFLLVVLVGAAQAFVAPSAFKGTAMTS-PRATRATTSKVSATPVMLDTYWEGKSPPSEVLGPALAKAPSVGLGLVSLVAFAAGTYCIHETNILHTVSPDNIQPAYVAGALLVPISWGLHVASWIQKQNGK 453 PS M++ A LL LV +A AF + +G + P + V DTYWEG PPS VLGP L+KAPS LG+VS + G Y ++ S + YV GA L+PISWGLHVASWIQK+NGK Sbjct: 11 PSTMRVLA-LLACLVASASAFAPATPMRGVVSKAMPXXXXXXXXXXVTSMVGQDTYWEGLYPPSSVLGPILSKAPSGLLGVVSGLFLGIGLYSAQANDLS---SLPVVHWEYVVGANLLPISWGLHVASWIQKENGK 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1442.3265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1442.3265.1 >prot_L-elsbetiae_contig1442.3265.1 ID=prot_L-elsbetiae_contig1442.3265.1|Name=mRNA_L-elsbetiae_contig1442.3265.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MKLFAFLLVVLVGAAQAFVAPSAFKGTAMTSPRATRATTSKVSATPVMLDback to top mRNA from alignment at L-elsbetiae_contig1442:13175..19986+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1442.3265.1 ID=mRNA_L-elsbetiae_contig1442.3265.1|Name=mRNA_L-elsbetiae_contig1442.3265.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6812bp|location=Sequence derived from alignment at L-elsbetiae_contig1442:13175..19986+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1442:13175..19986+ >mRNA_L-elsbetiae_contig1442.3265.1 ID=mRNA_L-elsbetiae_contig1442.3265.1|Name=mRNA_L-elsbetiae_contig1442.3265.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig1442:13175..19986+ (Laminarionema elsbetiae ELsaHSoW15)back to top |