mRNA_L-elsbetiae_contig14411.3262.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14411.3262.1
Unique NamemRNA_L-elsbetiae_contig14411.3262.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: D7FKS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS6_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 5.460e-164
Identity = 252/334 (75.45%), Postives = 286/334 (85.63%), Query Frame = 2
Query:  449 PRAGQDIYGSEGSRFHITYDGGRMGRRSARARFDPDAGDVPSSTITPGDVAMVGGVSAAVAAVQRYNRKRFLDEEGQEYGRPRSPALQGRADRKGSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            PRAG+DIYGSEGSRFHI +DGGR GRRS RARF+P  GD PS++ITPGDVAM+GGVSAAVAAVQRYNRKRF+DEEG   G+  S  L  R+ R GS QTAVV+TLQL L+ DR GG GDVLA LD LSQTADVNS RG STLI+EVCLTLLRS +DW+GGTGS+K Y+ +GR N+R +K++P SRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWG  +A++ GTY VATL+VAW+GL STPP+ EPR+G WF +D   RD DD+ VE+SVVNR+SAL LL+WL DEAAEGRGENVLDVEVLWTPADPDDSLDR+DLD KWPELRAL
Sbjct:  209 PRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGS--GQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFTRDSRDRD-DDRGVEFSVVNRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 539          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.690e-14
Identity = 76/234 (32.48%), Postives = 106/234 (45.30%), Query Frame = 2
Query:  752 VSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSAL-NLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            V  LQ++L +      G +LA L  +++ A+ +S+ G ST +SEVCL L+R   DWI      + ++P             A RA+  FN  A+ ER+K ERETVS       S S              T  V T+++A  G      Q E                         +N  SAL N+L  +A +A    GENVL VE+LWTP +P +SLDR  +   +PEL  L
Sbjct:  201 VVKLQVALNASDRSSRG-ILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAP-----------RSAERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLALKGESLKRFQLE-----------------------RSINSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S0QBA5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBA5_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 2.290e-12
Identity = 64/211 (30.33%), Postives = 91/211 (43.13%), Query Frame = 2
Query:  818 LDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            L  L++TAD +S  G   L+S+ CL  LRS KDW+    + +T            K   ++  +  +NR  ++ERSKWE E  S T                 +    TY+VATL+V        P  T                         V   R A++ L   AD + E   +N++  EVLWTP DP+D +DRDD+   +PEL  L
Sbjct:   79 LQSLARTADTSSYEGLQQLVSDTCLATLRSSKDWLAARTTSET------------KGLFSNDVESQYNRIVVKERSKWESEQKSLTR---------------TSAGEATYMVATLVVLLRNGSELPEVT------------------------GVNELREAISQLA--ADVSIE---DNLIAAEVLWTPEDPNDVMDRDDMFLNFPELVTL 233          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S2X718_9EUKA (Hypothetical protein n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2X718_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 9.990e-12
Identity = 71/234 (30.34%), Postives = 103/234 (44.02%), Query Frame = 2
Query:  743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441
            T  V  LQ++++  DR  GP  +   L++L+  AD  S+ G   L+ E  L LLRS++DW+ G          G+ N+           +  FN+A ++ER+K+E E        G +    PS           Y++ T+MVA   LR  P     R                      +   RSAL +       A     EN+L  EVLWTP DPDDSL R+++  K+PEL
Sbjct:  185 TGTVMLLQVAVYCGDR--GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSND----------VESAFNQALLKERAKFEEENTGRLKRVGANK---PS-----------YMIVTVMVA---LRDAPNLPTIR---------------------GLDEMRSALAMTS-----ARASIEENLLAAEVLWTPEDPDDSLTREEVFLKFPEL 363          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S4DSS3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSS3_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 3.110e-11
Identity = 70/234 (29.91%), Postives = 103/234 (44.02%), Query Frame = 2
Query:  743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441
            T  V  LQ++++  DR  GP  +   L++L+  AD  S+ G   L+ E  L LLRS++DW+ G          G+ N+           +  FN+A ++ER+K+E E        G +    PS           Y++ T+MVA   LR  P     R                      +   RSAL +       A     EN+L  EVLWTP DP+DSL R+++  K+PEL
Sbjct:  182 TGTVMLLQVAVYCGDR--GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSND----------VESAFNQALLKERAKFEEENTGRLKRVGANK---PS-----------YMIVTVMVA---LRDAPNLPTIR---------------------GLDEMRSALAMTS-----ARASIEENLLAAEVLWTPEDPEDSLTREEVFLKFPEL 360          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A8J7B5L9_9CYAN (DUF1517 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07298 TaxID=2777970 RepID=A0A8J7B5L9_9CYAN)

HSP 1 Score: 71.2 bits (173), Expect = 3.770e-10
Identity = 66/240 (27.50%), Postives = 106/240 (44.17%), Query Frame = 2
Query:  731 GSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            GS     V+ LQ+ L ++  G   D    L+ L+ TAD  + +G + L+ E  L LLR    W                   + K T    A+++FNR A+  RS++  ET+SN  ++   +           +  G Y++AT++VA  G    P                       D+ YS  + R AL+ +  ++       GEN+L VEVLWTP    ++L  D+L A++PEL+ +
Sbjct:   41 GSNPPVAVAKLQVGLLAEARGLQDD----LNRLATTADTGTSQGLAKLLQETTLALLRHPDYWAYAAS--------------EDKQTRLLSAEQEFNRYALSARSRFSAETLSNVNNQLTQAEIQAKLPGDADQAPGEYILATVVVATQGKLDLP-----------------------DI-YSSADLRQALSHIGAVS-------GENLLAVEVLWTPQQSGETLSGDELIAQYPELKLI 231          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S3KY79_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY79_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.780e-10
Identity = 102/406 (25.12%), Postives = 167/406 (41.13%), Query Frame = 2
Query:  245 WRERRRFLTILPLVFS-ATTAFSQASIAAVTGGRIGGGYTPPAAERTPSAPPMQQEQRY--QAPQRQKQYQPRAGQDIYGSEGSRFH-ITYDGGRMGRRSARARFDPDAGDVPSSTITPGDVAMVGGVSAAVAAVQRYNRKRFLDEEGQEYGRPRSPALQGRADRKGSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            W   RR   +  L  S A+ + S  ++AAVTGGR GG +    +  +PS P M +      + P   +   PR    IY S     H   YD G +   S             S+T++  D+ ++GGV A +A     N +R                 Q   D++G    A  +++ L++       P  ++  ++ ++Q  D +SQ G  TLISEVCL L+R              Y               +  A +DF   ++  RS++++ET+S    + ++++T+ +   S          AT+ V                   F  +G       +D+ +    R   +NLL+W A   A     ++L  EVLW+P D  D+L R D+D ++PEL  L
Sbjct:  121 WTVFRRKAVLFALSVSLASASLSDPAMAAVTGGRAGGTFK---SSPSPSRPSMSRNYHSHGRTPMMPRTRMPRV---IYSSPPIGHHSYAYDQGGLMMASR------------STTMSTKDILVLGGV-AGLATYGMVNGRR-----------------QDNNDKEGG---ATATSIMLAVNVPDRNSPDSIIRRVNEIAQRTDTSSQAGVQTLISEVCLELVRQQASLQAAWSDSNHYKL-------------SRTALQDFQGRSVSNRSRYDQETMSKFNAQDYNANTSEAKNDS--------AKATMAVV---------------SVHFVTEG-------EDISHFKNMRADVVNLLRWTA---ATVPVTSLLAGEVLWSPQDATDTLTRRDIDERYPELTPL 441          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A0M0K0F2_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0F2_9EUKA)

HSP 1 Score: 70.1 bits (170), Expect = 9.000e-10
Identity = 75/236 (31.78%), Postives = 105/236 (44.49%), Query Frame = 2
Query:  734 SKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441
            S Q      LQ++ + D       +   L+ ++ +AD +S+ G  +L+S+ CL +LRS KDW+    + +T S        D  A         +NR  + ERSKWE E  +          TAP           TY+VATL+V    LRS  P  +P       Q+G  RD                   LQ LA  AA    +N+L  EVLWTP D +D +DRD+L   +PEL
Sbjct:   49 SDQPGAALCLQVACYCDDR--QNSLFGKLNKIASSADTDSELGLQSLVSDTCLAILRSSKDWL----AARTESEIAGLLKNDVDAA--------YNRLVVTERSKWEVEQKA-------LKRTAPGQP--------TYMVATLVVL---LRSAQP-LKP-----ISQNGDLRD------------------ALQNLA--AAVSVDDNLLAAEVLWTPEDTNDVMDRDELFLNFPEL 226          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A1Z4JFP3_LEPBY (Uncharacterized protein n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JFP3_LEPBY)

HSP 1 Score: 70.9 bits (172), Expect = 1.570e-9
Identity = 68/243 (27.98%), Postives = 105/243 (43.21%), Query Frame = 2
Query:  734 SKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDR----GFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450
            S  T  V+ +Q+ L ++      ++ A LD + + AD +S  G + ++ E  L LLR+ + W+ GT   K               T    A  +FNR A+ ERSK+  ET+SN  ++      S+ T     S+ A   G Y+V TL+V   G    P                       ++  +   RRS   L    +D+        +L +EVLWTP    D L RDDL A++P L+ +
Sbjct:  122 STPTISVAKVQVGLLAEAR----ELKADLDRIGEKADTSSSEGLAQVLQEASLALLRNPQYWVYGTTEAKQ--------------TRLEAASGEFNRLALSERSKFSAETLSNVNNQLKQASSSALTLADKDSALAEAPGEYIVVTLLVGTQGKLQLP-----------------------EINSAEDLRRSLSQLGSVSSDQ--------LLALEVLWTPQADGDVLTRDDLLAEYPNLKLV 315          
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S0H5R7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5R7_9EUKA)

HSP 1 Score: 70.9 bits (172), Expect = 2.350e-9
Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 2
Query:  743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSN-----TPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441
            T  V  LQ++++  DR  G   + + L++L + AD  S++G   L+ E  + LLRS++DW+ G          G+ N+           +  FN A ++ER+K+E E VS      TPD+       PS           ++V T++VA     S P  +                         + + R+AL +       A     EN+L  EVLWTP D  D+L R+++  K+PEL
Sbjct:  180 TGTVMLLQVAVYCGDR--GKNSLFSRLNNLGREADTWSEQGLKNLVQESTIALLRSEEDWVAGRSETFQKGMFGKSND----------VESAFNAALLQERAKFEEENVSKRSKIQTPDK-------PS-----------HMVVTILVALRDAPSLPTVS------------------------GIEDMRAALAMTS-----ARASIEENLLAAEVLWTPEDSSDTLSREEVFLKFPEL 359          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS6_ECTSI5.460e-16475.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZEJ7_9STRA1.690e-1432.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0QBA5_9EUKA2.290e-1230.33Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2X718_9EUKA9.990e-1230.34Hypothetical protein n=3 Tax=Lotharella TaxID=7481... [more]
A0A7S4DSS3_9EUKA3.110e-1129.91Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A8J7B5L9_9CYAN3.770e-1027.50DUF1517 domain-containing protein n=1 Tax=Nodosili... [more]
A0A7S3KY79_9STRA3.780e-1025.12Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A0M0K0F2_9EUKA9.000e-1031.78Membrane protein n=1 Tax=Chrysochromulina tobinii ... [more]
A0A1Z4JFP3_LEPBY1.570e-927.98Uncharacterized protein n=1 Tax=Leptolyngbya borya... [more]
A0A7S0H5R7_9EUKA2.350e-927.62Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14411contigL-elsbetiae_contig14411:1011..4369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.7
Seed ortholog evalue4.1e-12
Seed eggNOG ortholog227086.JGI_V11_71083
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Protein of unknown function (DUF1517)
EggNOG OGs2QUI9@2759,COG4371@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF1517
Ec32 orthologEc-21_001970.1
Exons4
Model size2175
Cds size1446
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14411.3262.1prot_L-elsbetiae_contig14411.3262.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14411 1018..3647 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.5260592-UTR-L-elsbetiae_contig14411:1010..10171622815577.5260592-UTR-L-elsbetiae_contig14411:1010..1017Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14411 1011..1017 +
1691682970.018942-UTR-L-elsbetiae_contig14411:1010..10171691682970.018942-UTR-L-elsbetiae_contig14411:1010..1017Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14411 1011..1017 +
1622815577.590921-UTR-L-elsbetiae_contig14411:3647..43691622815577.590921-UTR-L-elsbetiae_contig14411:3647..4369Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14411 3648..4369 +
1691682970.0663543-UTR-L-elsbetiae_contig14411:3647..43691691682970.0663543-UTR-L-elsbetiae_contig14411:3647..4369Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14411 3648..4369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.5398579-CDS-L-elsbetiae_contig14411:1017..18931622815577.5398579-CDS-L-elsbetiae_contig14411:1017..1893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 1018..1893 +
1691682970.029211-CDS-L-elsbetiae_contig14411:1017..18931691682970.029211-CDS-L-elsbetiae_contig14411:1017..1893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 1018..1893 +
1622815577.550397-CDS-L-elsbetiae_contig14411:2201..22771622815577.550397-CDS-L-elsbetiae_contig14411:2201..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 2202..2277 +
1691682970.0375519-CDS-L-elsbetiae_contig14411:2201..22771691682970.0375519-CDS-L-elsbetiae_contig14411:2201..2277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 2202..2277 +
1622815577.5648625-CDS-L-elsbetiae_contig14411:2538..28691622815577.5648625-CDS-L-elsbetiae_contig14411:2538..2869Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 2539..2869 +
1691682970.0465517-CDS-L-elsbetiae_contig14411:2538..28691691682970.0465517-CDS-L-elsbetiae_contig14411:2538..2869Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 2539..2869 +
1622815577.5771153-CDS-L-elsbetiae_contig14411:3484..36471622815577.5771153-CDS-L-elsbetiae_contig14411:3484..3647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 3485..3647 +
1691682970.0577135-CDS-L-elsbetiae_contig14411:3484..36471691682970.0577135-CDS-L-elsbetiae_contig14411:3484..3647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14411 3485..3647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14411.3262.1

>prot_L-elsbetiae_contig14411.3262.1 ID=prot_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=482bp
MRPTGGLIAAVATVVVATKGAHAFVPPTRVFSWRTRAASQHQQHPPELAV
AVEHVVDDSDSGNGVDDVGDPLSNSGAIRWRERRRFLTILPLVFSATTAF
SQASIAAVTGGRIGGGYTPPAAERTPSAPPMQQEQRYQAPQRQKQYQPRA
GQDIYGSEGSRFHITYDGGRMGRRSARARFDPDAGDVPSSTITPGDVAMV
GGVSAAVAAVQRYNRKRFLDEEGQEYGRPRSPALQGRADRKGSKQTAVVS
TLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRS
DKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWER
ETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTE
PRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENV
LDVEVLWTPADPDDSLDRDDLDAKWPELRAL*
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mRNA from alignment at L-elsbetiae_contig14411:1011..4369+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14411.3262.1 ID=mRNA_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3359bp|location=Sequence derived from alignment at L-elsbetiae_contig14411:1011..4369+ (Laminarionema elsbetiae ELsaHSoW15)
GCCGATCATGAGGCCCACAGGCGGACTGATTGCCGCTGTAGCCACAGTAG TCGTTGCAACGAAGGGTGCGCACGCGTTTGTGCCGCCAACGCGCGTTTTT TCATGGCGAACGAGAGCGGCTTCTCAACATCAACAACACCCTCCTGAATT GGCTGTCGCTGTGGAACATGTTGTTGACGATAGTGACAGCGGTAACGGCG TCGACGACGTTGGCGACCCGTTGAGCAATTCCGGTGCCATTAGGTGGAGG GAGAGGAGAAGGTTTCTCACTATCTTGCCTCTGGTATTTTCTGCAACCAC GGCGTTCTCTCAAGCCTCTATCGCTGCAGTGACCGGAGGTCGAATAGGGG GAGGTTATACCCCTCCCGCGGCTGAGCGCACCCCGAGCGCCCCGCCAATG CAGCAGGAGCAACGTTACCAGGCGCCACAGCGGCAGAAACAGTATCAGCC ACGGGCTGGCCAGGATATCTATGGCTCCGAGGGAAGCCGATTTCATATCA CATATGATGGCGGGCGAATGGGACGGCGGTCAGCCCGCGCTCGTTTTGAC CCCGACGCCGGTGATGTTCCAAGCAGCACCATCACTCCGGGTGACGTCGC TATGGTAGGGGGCGTCTCCGCGGCGGTTGCGGCCGTCCAGCGCTACAACA GGAAGCGTTTTTTGGATGAAGAGGGTCAAGAATACGGCAGGCCTCGTTCC CCTGCTTTGCAGGGGCGGGCCGATCGAAAGGGCAGCAAACAGACGGCGGT GGTCTCGACACTGCAGTTGTCGCTGTGGTCCGACCGAACTGGGGGGCCAG GGGATGTTTTGGCGGCGCTCGACCATCTCTCCCAAACAGCGGATGTCAAC AGTCAAAGAGGTTTTTCTACTCTCATCAGCGAGGTGCGTGCGCGCTTTAG GTCCCAAGGGTCGTTTTTGCCGCCGAGGGTATGGACGGCGGTTGGGCGTG AATCACATGTGTGTGTGTTCGCGCGCTCCCACCGGATACATCTGTTATTT CCCATGCCCAACGCTTCTCATTCCCGTGTGCTTCCCACGTTTCCATACAT TTCTGGCCAGCCCAGCGGCACATCCTACCTCATTGTGTTTTGTTCCGGTG GTAAGGTGGACGGTTCGGCCGGGGCGGTCTTGTCGTCGTCCTTTCCGTAT GTACGATTTTTCGCTCATCGAATCTGTTCGCGTATGCCTAGGTATGCCTG ACGCTGCTTCGCTCGGACAAAGACTGGATCGGCGGCACCGGAAGCCTCAA AACATACTCTCCCGACGGTCAGTGGTTTCCGCCTTTACAAACGTAACAGT TTTTGCTTGATACACCGGCGATCATGTGCACTGGATGTGTTTTTTGTCGA ACGAGAGCCAACTGTGTACGTAGTGTGGCTTGGTCGCTGATATATGGGTT CCGTATGCAAGGAGGATATAGTCTAGCTGCGCTATTGAACATCGCGTGAT TATTCCGAAAGTCCTCTTTTTGCGTCATTGTAGCAGTCCGTCCCTCCTCG AATTCCTCCCCCTCCCCAAACGCTTCAGGCCGCCCGAACAACCGGGACAG AAAAGCCACCCCAGCGTCCAGGGCAAAGCGTGACTTCAACCGAGCCGCGA TGCGCGAGCGATCAAAGTGGGAGCGGGAGACGGTGTCAAACACCCCCGAC AGAGGGTTCAGCAGCAGCACGGCACCATCGTGGGGGAGTTCCAACGCCCG ACAGGGCGGGACGTATCTCGTGGCAACCTTAATGGTCGCTTGGGCGGGGT TGAGGAGCACCCCTCCCCAGACGGAGCCACGAAAGGGCGCTTGGTTCTGG CAGGACGGTGGGGGTCGCGACAACGACGACAAAGATGTGGAGTACTCCGT GGTGAACAGGTGCGAGGATTGCAAACGAGGTGTTCCTGCCGTGCTCGTGT TCGGGCCACTCGGCCGCGCTCCCAAGGAAGTGCGTTGGCCGAACTGGGTG CAAAACGTGCTTGTTTCGCCCTTGATGAGCCATCGCGAGCGATGCCTACC TCTTTATCGAAGGCATGAGGTGTGCGCTTACTTCGTTTGCTTTCTTTTGC CCACAAGCGACGATGTGCATTATAGCTCGTTCGACCGCAAGCCGGCCGCT GCTGTCGAGGATCATGGATATGTTGTGAAGGATGAACGGCCGAGTGACAT CGGGCTCGCCTCTGGCTTGAGTAGAGGACGAGCACGCACCTCGCTGTGCC TAGACTTCTCTGCGAACTTGCGGGCGGGTTCAGAACGACCCGTTCACTGC CATTCAACCATTTCCCCCCTATATTGCTCCGTCCTTGCCGTCTTTGACAT CGCCAGGCTTTTCGCCCAAACATTTAGAGCGCAGCCTGAACTTGCGCGCC GTAATATTTTGTAGGCCGTTCTACCTAATTTTCGGGTTCTTGGGTGTGTT GTGCACTAGCATCGAGACTCAAAAACAACTAACGGCGCGTTTTTTTGCCC GCGATGCCGCAATCAATCGAGCAGGAGATCGGCGCTGAATCTACTGCAAT GGCTAGCGGACGAGGCCGCCGAAGGGCGAGGAGAAAACGTGTTGGATGTA GAGGTGCTGTGGACCCCCGCAGACCCCGATGATTCGCTCGATCGGGACGA TTTAGATGCCAAGTGGCCGGAACTTAGAGCTCTCTAGGTAGCGTTTCAAG TGAAAGTTTCACGAGATCCTAGCAGACTTGGGGGAGTTGGGATCACTCGA CGTCTTTGGATTTGCCAAGGCATTTCCGTCCTACTACATATGTAAATTAG AGTACCGTACCATGTAAGTTAAGAGGAGAGTGCCGCTACTAAAGGCCCGG TTGCACGATTTACACACAGAAAAAAACTCGAAAAACATGATTTTGTGCAG ATCAAACATGGAGCGCTCAAAGATGCTTCCAATATTCGGTTATGTTTTGC TATATAAGGAGATGTAAAATGGAATTCATCCAAGGTTGGAGAATACCCAA GTTTTTGTATTACTGCACGACTTGGTGGCAAGATGTTTGGGGGGTGTAGC GTGGATCGGCGCACCTAAAATTATTGGCCTTCATTATTCTAGAACCTTAG AAGACTGCTTACACATTATATGTTGTTGAATAGAATTACATGTAATCCTG ACAGGAGGTGTTTTTTTTGTGTAGGTACGCTCGCATATAGAGTAGGTACG AGATTTGCGTTTGGGTAAAATTGGAGTGCACGGTTGTTAGACACAGTAGA GGTTCGAGCAATCGAAAAGTGGTCTCTTGTGTCAGTCACTACTGTTGTTG TTGATGGTGCACTGGCCGTGTGTAACTCTTTTATTATGTAGAAGCTCAGT CCTTCGTCGGACTGGTTTGAAAAGGATAACTTTGAACCAGGGCTCTCCTT CTTAGTTTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14411:1011..4369+

>mRNA_L-elsbetiae_contig14411.3262.1 ID=mRNA_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2892bp|location=Sequence derived from alignment at L-elsbetiae_contig14411:1011..4369+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCCCACAGGCGGACTGATTGCCGCTGTAGCCACAGTAGTCGTTGC
AACGAAGGGTGCGCACGCGTTTGTGCCGCCAACGCGCGTTTTTTCATGGC
GAACGAGAGCGGCTTCTCAACATCAACAACACCCTCCTGAATTGGCTGTC
GCTGTGGAACATGTTGTTGACGATAGTGACAGCGGTAACGGCGTCGACGA
CGTTGGCGACCCGTTGAGCAATTCCGGTGCCATTAGGTGGAGGGAGAGGA
GAAGGTTTCTCACTATCTTGCCTCTGGTATTTTCTGCAACCACGGCGTTC
TCTCAAGCCTCTATCGCTGCAGTGACCGGAGGTCGAATAGGGGGAGGTTA
TACCCCTCCCGCGGCTGAGCGCACCCCGAGCGCCCCGCCAATGCAGCAGG
AGCAACGTTACCAGGCGCCACAGCGGCAGAAACAGTATCAGCCACGGGCT
GGCCAGGATATCTATGGCTCCGAGGGAAGCCGATTTCATATCACATATGA
TGGCGGGCGAATGGGACGGCGGTCAGCCCGCGCTCGTTTTGACCCCGACG
CCGGTGATGTTCCAAGCAGCACCATCACTCCGGGTGACGTCGCTATGGTA
GGGGGCGTCTCCGCGGCGGTTGCGGCCGTCCAGCGCTACAACAGGAAGCG
TTTTTTGGATGAAGAGGGTCAAGAATACGGCAGGCCTCGTTCCCCTGCTT
TGCAGGGGCGGGCCGATCGAAAGGGCAGCAAACAGACGGCGGTGGTCTCG
ACACTGCAGTTGTCGCTGTGGTCCGACCGAACTGGGGGGCCAGGGGATGT
TTTGGCGGCGCTCGACCATCTCTCCCAAACAGCGGATGTCAACAGTCAAA
GAGGTTTTTCTACTCTCATCAGCGAGATGAGGCCCACAGGCGGACTGATT
GCCGCTGTAGCCACAGTAGTCGTTGCAACGAAGGGTGCGCACGCGTTTGT
GCCGCCAACGCGCGTTTTTTCATGGCGAACGAGAGCGGCTTCTCAACATC
AACAACACCCTCCTGAATTGGCTGTCGCTGTGGAACATGTTGTTGACGAT
AGTGACAGCGGTAACGGCGTCGACGACGTTGGCGACCCGTTGAGCAATTC
CGGTGCCATTAGGTGGAGGGAGAGGAGAAGGTTTCTCACTATCTTGCCTC
TGGTATTTTCTGCAACCACGGCGTTCTCTCAAGCCTCTATCGCTGCAGTG
ACCGGAGGTCGAATAGGGGGAGGTTATACCCCTCCCGCGGCTGAGCGCAC
CCCGAGCGCCCCGCCAATGCAGCAGGAGCAACGTTACCAGGCGCCACAGC
GGCAGAAACAGTATCAGCCACGGGCTGGCCAGGATATCTATGGCTCCGAG
GGAAGCCGATTTCATATCACATATGATGGCGGGCGAATGGGACGGCGGTC
AGCCCGCGCTCGTTTTGACCCCGACGCCGGTGATGTTCCAAGCAGCACCA
TCACTCCGGGTGACGTCGCTATGGTAGGGGGCGTCTCCGCGGCGGTTGCG
GCCGTCCAGCGCTACAACAGGAAGCGTTTTTTGGATGAAGAGGGTCAAGA
ATACGGCAGGCCTCGTTCCCCTGCTTTGCAGGGGCGGGCCGATCGAAAGG
GCAGCAAACAGACGGCGGTGGTCTCGACACTGCAGTTGTCGCTGTGGTCC
GACCGAACTGGGGGGCCAGGGGATGTTTTGGCGGCGCTCGACCATCTCTC
CCAAACAGCGGATGTCAACAGTCAAAGAGGTTTTTCTACTCTCATCAGCG
AGGTATGCCTGACGCTGCTTCGCTCGGACAAAGACTGGATCGGCGGCACC
GGAAGCCTCAAAACATACTCTCCCGACGGTATGCCTGACGCTGCTTCGCT
CGGACAAAGACTGGATCGGCGGCACCGGAAGCCTCAAAACATACTCTCCC
GACGGCCGCCCGAACAACCGGGACAGAAAAGCCACCCCAGCGTCCAGGGC
AAAGCGTGACTTCAACCGAGCCGCGATGCGCGAGCGATCAAAGTGGGAGC
GGGAGACGGTGTCAAACACCCCCGACAGAGGGTTCAGCAGCAGCACGGCA
CCATCGTGGGGGAGTTCCAACGCCCGACAGGGCGGGACGTATCTCGTGGC
AACCTTAATGGTCGCTTGGGCGGGGTTGAGGAGCACCCCTCCCCAGACGG
AGCCACGAAAGGGCGCTTGGTTCTGGCAGGACGGTGGGGGTCGCGACAAC
GACGACAAAGATGTGGAGTACTCCGTGGTGAACAGGCCGCCCGAACAACC
GGGACAGAAAAGCCACCCCAGCGTCCAGGGCAAAGCGTGACTTCAACCGA
GCCGCGATGCGCGAGCGATCAAAGTGGGAGCGGGAGACGGTGTCAAACAC
CCCCGACAGAGGGTTCAGCAGCAGCACGGCACCATCGTGGGGGAGTTCCA
ACGCCCGACAGGGCGGGACGTATCTCGTGGCAACCTTAATGGTCGCTTGG
GCGGGGTTGAGGAGCACCCCTCCCCAGACGGAGCCACGAAAGGGCGCTTG
GTTCTGGCAGGACGGTGGGGGTCGCGACAACGACGACAAAGATGTGGAGT
ACTCCGTGGTGAACAGGAGATCGGCGCTGAATCTACTGCAATGGCTAGCG
GACGAGGCCGCCGAAGGGCGAGGAGAAAACGTGTTGGATGTAGAGGTGCT
GTGGACCCCCGCAGACCCCGATGATTCGCTCGATCGGGACGATTTAGATG
CCAAGTGGCCGGAACTTAGAGCTCTCTAGGAGATCGGCGCTGAATCTACT
GCAATGGCTAGCGGACGAGGCCGCCGAAGGGCGAGGAGAAAACGTGTTGG
ATGTAGAGGTGCTGTGGACCCCCGCAGACCCCGATGATTCGCTCGATCGG
GACGATTTAGATGCCAAGTGGCCGGAACTTAGAGCTCTCTAG
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