mRNA_L-elsbetiae_contig1441.3258.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1441.3258.1
Unique NamemRNA_L-elsbetiae_contig1441.3258.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1441.3258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1441contigL-elsbetiae_contig1441:9215..10381 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1168
Cds size1167
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815577.0837026-CDS-L-elsbetiae_contig1441:9214..103811622815577.0837026-CDS-L-elsbetiae_contig1441:9214..10381Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 9215..10381 +
1691682969.7453496-CDS-L-elsbetiae_contig1441:9214..103811691682969.7453496-CDS-L-elsbetiae_contig1441:9214..10381Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1441 9215..10381 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1441.3258.1prot_L-elsbetiae_contig1441.3258.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1441 9215..10381 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1441.3258.1

>prot_L-elsbetiae_contig1441.3258.1 ID=prot_L-elsbetiae_contig1441.3258.1|Name=mRNA_L-elsbetiae_contig1441.3258.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=389bp
ESNRKKLPDEDGHHGETKQMALPNTERIANEEGRSQARPRAHPVAGSQQR
EPPRVTSKEYIFSRLSRTTAPAPAVRATNPVDPPPDSELRQQFVNSTAPN
VILLCPVKPPSSDGGRVSSSGGDEDDLVVTLDIAPPPEVRRDASSGRIAR
ERESANSHPDTPLTTRAGGMTEPRHARIPAEVTATLENGRNEIRSATITP
TGLRCSGPCDDKWKSGNKDLASIEWQSVMPTEVRKSSIVKDPWCVRILAE
AAVTIASNSSKEKLTALPTGKSASRPTPPPITPPSVARDRWSVRVLVKTR
ATLASCGVLGRSADVSLETAYGLLPSVEDGNRRGNKVTGTERRASGGGGR
CSASSSRKRRKSLPIMTQERRGKGGVAAATTVHRWTACG
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mRNA from alignment at L-elsbetiae_contig1441:9215..10381+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1441.3258.1 ID=mRNA_L-elsbetiae_contig1441.3258.1|Name=mRNA_L-elsbetiae_contig1441.3258.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1167bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:9215..10381+ (Laminarionema elsbetiae ELsaHSoW15)
GAAAGTAACCGGAAGAAACTTCCTGACGAAGATGGCCACCATGGCGAAAC
TAAGCAGATGGCACTGCCGAACACCGAGCGCATTGCGAATGAGGAGGGGC
GTAGCCAAGCCAGACCGCGTGCGCATCCTGTTGCCGGTTCTCAACAGCGA
GAACCACCTCGTGTCACCAGCAAGGAATATATATTTTCTCGACTTTCGCG
GACTACAGCTCCAGCTCCAGCGGTTCGTGCGACGAACCCGGTGGATCCCC
CCCCCGATTCAGAGCTTCGACAGCAATTCGTGAACTCGACAGCTCCGAAT
GTTATCCTTCTATGCCCCGTTAAGCCACCGTCTTCCGATGGGGGCAGGGT
CAGTAGTAGCGGCGGGGACGAAGATGACCTAGTGGTTACCTTGGATATAG
CGCCGCCCCCTGAGGTCCGCCGTGACGCCAGTTCTGGGAGGATTGCAAGA
GAAAGAGAATCGGCCAATTCGCACCCAGATACGCCGTTGACAACAAGAGC
TGGTGGTATGACGGAGCCACGGCATGCGAGAATTCCAGCGGAGGTGACAG
CAACGTTGGAGAATGGCAGGAACGAGATAAGATCGGCAACCATTACACCC
ACCGGATTGCGATGTAGTGGTCCTTGCGATGATAAATGGAAAAGCGGCAA
TAAGGACTTGGCTTCAATAGAGTGGCAATCAGTAATGCCGACGGAAGTAC
GAAAATCTTCGATTGTCAAAGACCCGTGGTGCGTGAGGATTCTAGCAGAG
GCAGCGGTAACGATAGCGAGCAATAGCAGCAAGGAAAAGCTGACAGCCCT
TCCAACAGGCAAATCGGCTTCCCGGCCAACGCCTCCTCCAATAACACCGC
CTTCGGTCGCCAGGGATCGATGGTCGGTGAGGGTTCTCGTGAAAACCAGG
GCGACATTGGCGTCTTGTGGCGTCTTGGGGAGATCGGCAGATGTCTCACT
CGAAACGGCTTACGGCCTTCTGCCGTCCGTTGAAGATGGTAACAGACGCG
GCAACAAGGTCACAGGGACAGAACGGCGGGCCAGCGGTGGCGGCGGCAGG
TGCTCCGCCTCGAGCAGTCGCAAAAGACGCAAGTCCTTACCCATCATGAC
GCAGGAGAGGAGAGGCAAGGGGGGTGTCGCAGCAGCTACTACTGTCCACC
GATGGACTGCCTGTGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1441:9215..10381+

>mRNA_L-elsbetiae_contig1441.3258.1 ID=mRNA_L-elsbetiae_contig1441.3258.1|Name=mRNA_L-elsbetiae_contig1441.3258.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2334bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:9215..10381+ (Laminarionema elsbetiae ELsaHSoW15)
GAAAGTAACCGGAAGAAACTTCCTGACGAAGATGGCCACCATGGCGAAAC
TAAGCAGATGGCACTGCCGAACACCGAGCGCATTGCGAATGAGGAGGGGC
GTAGCCAAGCCAGACCGCGTGCGCATCCTGTTGCCGGTTCTCAACAGCGA
GAACCACCTCGTGTCACCAGCAAGGAATATATATTTTCTCGACTTTCGCG
GACTACAGCTCCAGCTCCAGCGGTTCGTGCGACGAACCCGGTGGATCCCC
CCCCCGATTCAGAGCTTCGACAGCAATTCGTGAACTCGACAGCTCCGAAT
GTTATCCTTCTATGCCCCGTTAAGCCACCGTCTTCCGATGGGGGCAGGGT
CAGTAGTAGCGGCGGGGACGAAGATGACCTAGTGGTTACCTTGGATATAG
CGCCGCCCCCTGAGGTCCGCCGTGACGCCAGTTCTGGGAGGATTGCAAGA
GAAAGAGAATCGGCCAATTCGCACCCAGATACGCCGTTGACAACAAGAGC
TGGTGGTATGACGGAGCCACGGCATGCGAGAATTCCAGCGGAGGTGACAG
CAACGTTGGAGAATGGCAGGAACGAGATAAGATCGGCAACCATTACACCC
ACCGGATTGCGATGTAGTGGTCCTTGCGATGATAAATGGAAAAGCGGCAA
TAAGGACTTGGCTTCAATAGAGTGGCAATCAGTAATGCCGACGGAAGTAC
GAAAATCTTCGATTGTCAAAGACCCGTGGTGCGTGAGGATTCTAGCAGAG
GCAGCGGTAACGATAGCGAGCAATAGCAGCAAGGAAAAGCTGACAGCCCT
TCCAACAGGCAAATCGGCTTCCCGGCCAACGCCTCCTCCAATAACACCGC
CTTCGGTCGCCAGGGATCGATGGTCGGTGAGGGTTCTCGTGAAAACCAGG
GCGACATTGGCGTCTTGTGGCGTCTTGGGGAGATCGGCAGATGTCTCACT
CGAAACGGCTTACGGCCTTCTGCCGTCCGTTGAAGATGGTAACAGACGCG
GCAACAAGGTCACAGGGACAGAACGGCGGGCCAGCGGTGGCGGCGGCAGG
TGCTCCGCCTCGAGCAGTCGCAAAAGACGCAAGTCCTTACCCATCATGAC
GCAGGAGAGGAGAGGCAAGGGGGGTGTCGCAGCAGCTACTACTGTCCACC
GATGGACTGCCTGTGGCGAAAGTAACCGGAAGAAACTTCCTGACGAAGAT
GGCCACCATGGCGAAACTAAGCAGATGGCACTGCCGAACACCGAGCGCAT
TGCGAATGAGGAGGGGCGTAGCCAAGCCAGACCGCGTGCGCATCCTGTTG
CCGGTTCTCAACAGCGAGAACCACCTCGTGTCACCAGCAAGGAATATATA
TTTTCTCGACTTTCGCGGACTACAGCTCCAGCTCCAGCGGTTCGTGCGAC
GAACCCGGTGGATCCCCCCCCCGATTCAGAGCTTCGACAGCAATTCGTGA
ACTCGACAGCTCCGAATGTTATCCTTCTATGCCCCGTTAAGCCACCGTCT
TCCGATGGGGGCAGGGTCAGTAGTAGCGGCGGGGACGAAGATGACCTAGT
GGTTACCTTGGATATAGCGCCGCCCCCTGAGGTCCGCCGTGACGCCAGTT
CTGGGAGGATTGCAAGAGAAAGAGAATCGGCCAATTCGCACCCAGATACG
CCGTTGACAACAAGAGCTGGTGGTATGACGGAGCCACGGCATGCGAGAAT
TCCAGCGGAGGTGACAGCAACGTTGGAGAATGGCAGGAACGAGATAAGAT
CGGCAACCATTACACCCACCGGATTGCGATGTAGTGGTCCTTGCGATGAT
AAATGGAAAAGCGGCAATAAGGACTTGGCTTCAATAGAGTGGCAATCAGT
AATGCCGACGGAAGTACGAAAATCTTCGATTGTCAAAGACCCGTGGTGCG
TGAGGATTCTAGCAGAGGCAGCGGTAACGATAGCGAGCAATAGCAGCAAG
GAAAAGCTGACAGCCCTTCCAACAGGCAAATCGGCTTCCCGGCCAACGCC
TCCTCCAATAACACCGCCTTCGGTCGCCAGGGATCGATGGTCGGTGAGGG
TTCTCGTGAAAACCAGGGCGACATTGGCGTCTTGTGGCGTCTTGGGGAGA
TCGGCAGATGTCTCACTCGAAACGGCTTACGGCCTTCTGCCGTCCGTTGA
AGATGGTAACAGACGCGGCAACAAGGTCACAGGGACAGAACGGCGGGCCA
GCGGTGGCGGCGGCAGGTGCTCCGCCTCGAGCAGTCGCAAAAGACGCAAG
TCCTTACCCATCATGACGCAGGAGAGGAGAGGCAAGGGGGGTGTCGCAGC
AGCTACTACTGTCCACCGATGGACTGCCTGTGGC
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