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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 859 |
| Cds size | 462 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815576.7800686-UTR-L-elsbetiae_contig14401:350..669 | 1622815576.7800686-UTR-L-elsbetiae_contig14401:350..669 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14401 351..669 + |
| 1691682969.59047-UTR-L-elsbetiae_contig14401:350..669 | 1691682969.59047-UTR-L-elsbetiae_contig14401:350..669 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14401 351..669 + |
| 1622815576.8301365-UTR-L-elsbetiae_contig14401:2763..2841 | 1622815576.8301365-UTR-L-elsbetiae_contig14401:2763..2841 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14401 2764..2841 + |
| 1691682969.6196492-UTR-L-elsbetiae_contig14401:2763..2841 | 1691682969.6196492-UTR-L-elsbetiae_contig14401:2763..2841 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14401 2764..2841 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815576.7995594-CDS-L-elsbetiae_contig14401:669..767 | 1622815576.7995594-CDS-L-elsbetiae_contig14401:669..767 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14401 670..767 + |
| 1691682969.6029747-CDS-L-elsbetiae_contig14401:669..767 | 1691682969.6029747-CDS-L-elsbetiae_contig14401:669..767 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14401 670..767 + |
| 1622815576.8153021-CDS-L-elsbetiae_contig14401:2399..2763 | 1622815576.8153021-CDS-L-elsbetiae_contig14401:2399..2763 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14401 2400..2763 + |
| 1691682969.6113966-CDS-L-elsbetiae_contig14401:2399..2763 | 1691682969.6113966-CDS-L-elsbetiae_contig14401:2399..2763 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14401 2400..2763 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14401.3253.1 >prot_L-elsbetiae_contig14401.3253.1 ID=prot_L-elsbetiae_contig14401.3253.1|Name=mRNA_L-elsbetiae_contig14401.3253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MTRGEGLLQLQCRRRGRAIPTESAEQRRRPRYWLSFLAVSSRNYVRRQHS
FCVDEGPPALLISQRPAGTIAGWKTSLYRGHSSGVHESQEQRVTTCRPQA
RAGFPSRQNTRATTKCPTPTPTGEEGSPSVSGRLTGITTAAAATAMPVTG
RQT* back to topmRNA from alignment at L-elsbetiae_contig14401:351..2841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14401.3253.1 ID=mRNA_L-elsbetiae_contig14401.3253.1|Name=mRNA_L-elsbetiae_contig14401.3253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2491bp|location=Sequence derived from alignment at L-elsbetiae_contig14401:351..2841+ (Laminarionema elsbetiae ELsaHSoW15)
GGTTAGAGCCCGGGGCCAGTCTTTAGTGAAGCGTTCTAATCAGGCATCTG
ACTGTACGAGACAGTATACCGCTAGTGCAAACTATACATATTTTTTTCTT
TATAAACTCAAACCAATGCCTCTTTCCACACATGGTGCTCGTTTTTCTCT
TCGCCTCCACACCAATGTGTTGCGCTCACGGGACACACACAGGTAGACTT
ACCACTACCGTATCTCTCTATTTCCGTGTCCTTGGCTGCCCCTCTACTCC
TGCTGCAAGTACCACTCGTCCGTGGTTGCGCTTCCATCAAGACTTGGAAA
CGCGGAGGCAAGCCCAAGTATGACACGGGGCGAAGGGCTGCTGCAACTGC
AATGCCGGAGGCGCGGGCGGGCGATACCTACAGAGTCAGCCGAACAGCGC
AGACGGCCACGCTACTGGTGAGCTGGTGGGCGTCTTCCCTCCTTGGCCGG
GGGTGAAGCTGTGCTGTTTGTGTTTGGTGCAGCTGCAGCACACATGTATG
TACACACGGCAGCCGCATCATGTGTGCCTGACTCTTCTCAGAGTTTTGTC
TGGAGCTTCCCGGAATACAAGCAATTACAAACCTGGTTGTCGTCCAACTA
GCAAGCCCTGGCCTCAAACGAAGTACCCACTCACACATCACACCTCACAC
CTCACAACTCACGCGCAACGGACTGCCTCCTGCATGCTTCGTCCATATTG
TACCCTGCCCAGCTTTCTTACGCAATATATCACACCCCCCCCCACCAGTA
CAGAAGAGTCAGGCTGAGAGAGTCTCAAAACAGCAACGTATGAGAGAGCT
GGCCCCTCTGCCCCGCCATGGCTTGAAAGATGGGGCCACCGTCGTTGTGG
GGCATGATAGATTCCCCACGTGTTCATTGATAATTTTATCATGAGGGGAC
AGAGGAGCTCGATTTTCCATCGAATCTTGATTTTTTTTTATGTACATATA
GAGTCTATGTATCTATGTATGTAGACTATGTATGTTCTAGTTTAGTAGTA
CAAGATTATGATCAGGGAGGAAGTTACGCGTTACGCGTTACCCATAATTA
CGCGTAATGTCGTTGGGACGACGTACGTAACGTTGGCCATCTGCCGTAAT
GTCCCGTTATGTATTGTGACGGTGCCTCATGGTACCCTCCCTCAGCACCA
GGGGCCCGTCCAAAATTCAAAAGCTCCAGCACACACAGCACACAGCAGAC
CACATCATGAACCAGGAGACCACCATCAACCTTCAGACCCCCAACGGTCT
CCAGGATCGGCCAGCCCTCCTGCAGCTGGTTACGATCACAAAGCAGTCGG
TTGACTAGAGAGTTTCGAGGGCGCCGATTTGCAGGACGTGGGGGCGGAGA
TGTAGATAGCTTTCCTTTTTGCGCTGGCAGCAGCGCTACCCCAGCAGCGG
AGACTATTTATATTGTTCTGTTGTTCTGTTGTTTGCGTTTTGGCGGGGGT
ATGGGGATGCAGGAACAGAGGGGGTGGCTGTGGGGTGCTGGCTAGATGTG
CTGCAAGACTCGAGGAGTTGCAAGCTCACGCACTGTTGCTGTTCTCTAAA
TAACTAAATATCTAGACCTAGACATGTAGATATATCTAGAGAATTGAGAA
TGGAGACTGATACAGTAGTATGTTTTTTTTTCTGAAGTCTATACGCTGCG
CCCTCTACAGGTGTAGGGTATCACACATACGAACGTCACAAGCACATAAC
CCATGCAGTTGCAGTGAAGAGGGCAGCGCTCAATAACCGACAACTACATT
TTCATACAGCATACACACACCACCTGACACAAACAGCTGTACACAAACAA
ACGCGAAAGAGCAAGAACTATGCCAGGCACAGAACTGCCAGGGATGGAGT
AACACAGCTAGGCACAGACCCCCAGGGGATGGTCCACTTTCGTACCCCCA
GCGGTAGCCGTAATTACGGGGACGTAACGTCAAAGGCCTGATTTGCCGTA
ATTACGGGGCCGTAACGTGGACAATCTGCCGTAACTTCCATCCCTGATTA
TGATTCACATTTCTCCCCCCCCCGTGTCTCTTTCTCGTCACACCCGAAGG
CTAAGCTTTCTGGCTGTTTCATCCAGAAACTATGTACGAAGGCAGCATTC
CTTCTGTGTTGATGAAGGTCCCCCTGCTCTGTTGATTTCCCAGCGCCCAG
CAGGGACCATCGCTGGATGGAAGACGAGCCTTTACCGCGGCCACAGCAGC
GGTGTACACGAGTCACAGGAGCAGCGTGTCACCACCTGTCGTCCTCAGGC
TCGTGCCGGATTCCCATCCCGACAGAACACCCGCGCCACCACAAAATGTC
CGACTCCAACCCCGACGGGGGAAGAGGGCTCGCCTTCGGTTTCGGGCCGC
CTCACGGGCATCACAACAGCAGCAGCAGCAACAGCCATGCCGGTGACCGG
GCGGCAGACGTAGGGGGAGGCGGCGGCGGCGCTGGGGTTGGCAGCGGCTG
CGGCAGTGGTTACGGCGGCAACACGCATTGGAAATGGGCTC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14401:351..2841+ >mRNA_L-elsbetiae_contig14401.3253.1 ID=mRNA_L-elsbetiae_contig14401.3253.1|Name=mRNA_L-elsbetiae_contig14401.3253.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig14401:351..2841+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACACGGGGCGAAGGGCTGCTGCAACTGCAATGCCGGAGGCGCGGGCG
GGCGATACCTACAGAGTCAGCCGAACAGCGCAGACGGCCACGCTACTGAT
GACACGGGGCGAAGGGCTGCTGCAACTGCAATGCCGGAGGCGCGGGCGGG
CGATACCTACAGAGTCAGCCGAACAGCGCAGACGGCCACGCTACTGGCTA
AGCTTTCTGGCTGTTTCATCCAGAAACTATGTACGAAGGCAGCATTCCTT
CTGTGTTGATGAAGGTCCCCCTGCTCTGTTGATTTCCCAGCGCCCAGCAG
GGACCATCGCTGGATGGAAGACGAGCCTTTACCGCGGCCACAGCAGCGGT
GTACACGAGTCACAGGAGCAGCGTGTCACCACCTGTCGTCCTCAGGCTCG
TGCCGGATTCCCATCCCGACAGAACACCCGCGCCACCACAAAATGTCCGA
CTCCAACCCCGACGGGGGAAGAGGGCTCGCCTTCGGTTTCGGGCCGCCTC
ACGGGCATCACAACAGCAGCAGCAGCAACAGCCATGCCGGTGACCGGGCG
GCAGACGTAGGCTAAGCTTTCTGGCTGTTTCATCCAGAAACTATGTACGA
AGGCAGCATTCCTTCTGTGTTGATGAAGGTCCCCCTGCTCTGTTGATTTC
CCAGCGCCCAGCAGGGACCATCGCTGGATGGAAGACGAGCCTTTACCGCG
GCCACAGCAGCGGTGTACACGAGTCACAGGAGCAGCGTGTCACCACCTGT
CGTCCTCAGGCTCGTGCCGGATTCCCATCCCGACAGAACACCCGCGCCAC
CACAAAATGTCCGACTCCAACCCCGACGGGGGAAGAGGGCTCGCCTTCGG
TTTCGGGCCGCCTCACGGGCATCACAACAGCAGCAGCAGCAACAGCCATG
CCGGTGACCGGGCGGCAGACGTAG back to top
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