mRNA_L-elsbetiae_contig1440.3251.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A6H5KR51_9PHAE (Transmembrane protein 267 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR51_9PHAE) HSP 1 Score: 270 bits (690), Expect = 6.930e-85 Identity = 181/339 (53.39%), Postives = 219/339 (64.60%), Query Frame = 1 Query: 1 REGMLLMLCFCSDLFPRTLLSGFLGSHGAAWGAIADNMAHASIAAASWAVVVTLSNPPSPIASSFRLMALPGSPLHRCGVSCAP------RRRTKA-------PPTPI------PRT-PSAGNTTSAEGSWEDFDAVQPCRRARPEAEEEKGGSAARSDEAGGRGA-----SASGFVEVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVALSLRVAFFSRCG-SWVRGNLR-------SLRRRRWRRPCGRSRSRGRGEDGD 918 +EG+LL+LC CSD P TLLS FL SH A W A DN++HA IAA+SWAVV++LS PPS A++F +ALPGSPLHRC SCA RRR A PP+ P T S+ ++ + D ++ +P +++ AAR + G G SA+ +E +FAACVGSALDLDHF+AAGS+RLSRAT LA RPWGHCVAAL+VAA AVA LTRNARAA VFSAG +HQLRD+TRRGLWLYPPRG T P+ YP YLLAQA+LPLV+A+ LR SRCG S V+ N R + RRRR C R+R R EDGD Sbjct: 11 QEGILLILCVCSDFLPTTLLSSFLDSHDALWKAAVDNLSHAGIAASSWAVVISLS-PPSSGAANFPELALPGSPLHRC-FSCARLLATGGRRRNHASNASHRPPPSXXXXXXXRPDTMDSSPKDLTSRSRYFDVESAEPSSPPPTISDQPALPMAARGERGAGGGCTARIPSAAVALEALFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGAKTPPVSYPIYLLAQALLPLVMAMCLRSGHGSRCGYSCVQRNTRHRRGLPCTRRRRRGDVACVRAR-RAENEDGD 346
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: D7FYK9_ECTSI (Transmembrane protein 267 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK9_ECTSI) HSP 1 Score: 155 bits (392), Expect = 2.670e-42 Identity = 79/98 (80.61%), Postives = 87/98 (88.78%), Query Frame = 1 Query: 439 SASGFVEVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRP 732 SA+ +EV+FAACVGSALDLDHF+AAGS+RLSRAT LA RPWGHCVAAL+VAA AVA LTRNARAA VFSAG +HQLRD+TRRGLWLYPPRGP T P Sbjct: 55 SAAAALEVLFAACVGSALDLDHFLAAGSVRLSRATALAGRPWGHCVAALIVAAFAVAALTRNARAAVCVFSAGATHQLRDSTRRGLWLYPPRGPKTPP 152
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A7S2W8E3_9STRA (Transmembrane protein 267 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8E3_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 9.710e-18 Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 493 DLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVA 786 DLDHF+AAGSLRL AT L+ RP+GH + A A LTR R V +A LSHQLRDA RRG+WL+P +T PL +P YL+ LPL+VA Sbjct: 1 DLDHFLAAGSLRLQDATRLSHRPFGHALLAAGCLGALAALLTRQRRKGVLVATAILSHQLRDALRRGMWLFPLG--STAPLPFPVYLVCLFSLPLLVA 96
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A1V9ZFX0_9STRA (Transmembrane protein 267 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFX0_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 9.010e-16 Identity = 57/114 (50.00%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 454 VEVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAV---AGLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVA 786 +E V A +GS LDLDHFVAA AT L+ERP GH VA + AL V +R RA A V LSHQLRDA RRGLW+ P G +T PL Y YL + LP V+A Sbjct: 119 LEGVIALLIGSLLDLDHFVAAAGWTFQAATSLSERPLGHAVAFIAAIALVVWCACPRSRRIRAVALVLVCLLSHQLRDAFRRGLWIAPGVG-STPPLPYAMYLALELSLPWVLA 231
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A482SJG6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJG6_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 4.470e-13 Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 457 EVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPL----VYPAYLLAQAVLPLVV 783 E+ A ALD+DHF+AAGS L AT L RP+GH +A + +L ++RN+R A +F A LSH LRD+ +RGLWL+P +T P+ V+P YL+ + L++ Sbjct: 81 ELALAGFTSCALDVDHFIAAGSASLQDATNLPHRPFGHALAFVPCVSLLYYAVSRNSRTAKLLFVALLSHHLRDSMKRGLWLWP-MDYSTPPIPFYYVFPMYLVLTWAMRLLM 192
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A024GKZ5_9STRA (Transmembrane protein 267 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GKZ5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 5.900e-12 Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 1 Query: 487 ALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAV----AGLTRNAR--AAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVA 786 A+DLDHF+AAGS R+ AT L +RP+ H A + + + V AG T+ R A ++ A SHQLRDA R G+WL+P +T P+ Y YL Q +LPL +A Sbjct: 78 AMDLDHFIAAGSFRIDAATNLKKRPFAHAFAFIALMCVFVWIQSAGNTKVVRFQRVALLWIALSSHQLRDAVRHGVWLWP--FGSTPPIPYALYLFIQVLLPLSIA 181
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A834MKT9_RHYFE (Transmembrane protein 267 n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834MKT9_RHYFE) HSP 1 Score: 72.4 bits (176), Expect = 2.670e-11 Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 457 EVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNA------RAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLV 780 E+ A + S +DLDHF+AA S L AT L RP+ HC +V + +A ++ + R A + +A +SH +RDATRRGLWLYP +T P+ Y Y+ ++P V Sbjct: 63 EIAICALIASMIDLDHFIAAKSFSLKDATRLKNRPFLHCTTLPLVVFMILAVISYSLQWNSLKRFALLLLTAFISHHIRDATRRGLWLYP--FGSTAPIPYAFYITLTCLVPFV 174
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A9VD36_MONBE (Transmembrane protein 267 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VD36_MONBE) HSP 1 Score: 72.0 bits (175), Expect = 6.130e-11 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 454 VEVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVAGLTRNARAAAS-------VFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQ-AVLPLVVA 786 ++ + A + S +DLDHF A L+ AT L+ RPW H + + AAL ++ + A + +A L+HQLRDA RRGLWLYP G + P+ Y YL A+ P V+A Sbjct: 101 LQAIICAILASLMDLDHFFHASRWSLTAATSLSTRPWLHSLPVAIAAALLLSYVAHRCNVAGAHRDTFLLPLTAVLTHQLRDAHRRGLWLYPLAGGASIPISYTFYLTFNVAIWPAVLA 219
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A2P8ZFL3_BLAGE (Transmembrane protein 267 n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8ZFL3_BLAGE) HSP 1 Score: 70.9 bits (172), Expect = 9.820e-11 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 457 EVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVA------GLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVA 786 E+ +GSA+DLDHF AA S +L A L RP+ HC + + +AV+ T R + +A LSH +RDATRRG W++P +T P+ Y YLLA LP ++A Sbjct: 66 EITLCGLLGSAIDLDHFAAAKSFKLQDARMLTSRPFMHCTSLPLAVFIAVSLPAYLYHWTSVQRLLWIMLAAILSHHIRDATRRGFWMWP--FGSTPPVPYVYYLLANMSLPHIIA 179
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Match: A0A131YR77_RHIAP (Transmembrane protein 267 n=3 Tax=Rhipicephalus TaxID=34630 RepID=A0A131YR77_RHIAP) HSP 1 Score: 70.5 bits (171), Expect = 1.270e-10 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 427 GRGASASGFVEVVFAACVGSALDLDHFVAAGSLRLSRATGLAERPWGHCVAALVVAALAVA------GLTRNARAAASVFSAGLSHQLRDATRRGLWLYPPRGPTTRPLVYPAYLLAQAVLPLVVALSLR 798 GR + +E + + G A+D+DHF+AA SL++ +AT L RP+ HC + ++V+ VA GL++ + A A SH LRD+ RRGLWL+P +T PL P Y + A L+ +++ Sbjct: 53 GRTLRKASLLESLLSGLFGCAVDVDHFLAARSLKIEKATNLQTRPFLHCSSVVLVSLSVVALLGRLLGLSQVYKVALIAIVAVASHHLRDSIRRGLWLWPLG--STSPLKLPVYYIGLACTVLIAMAAMK 180 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1440.3251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1440.3251.1 >prot_L-elsbetiae_contig1440.3251.1 ID=prot_L-elsbetiae_contig1440.3251.1|Name=mRNA_L-elsbetiae_contig1440.3251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp MLLMLCFCSDLFPRTLLSGFLGSHGAAWGAIADNMAHASIAAASWAVVVTback to top mRNA from alignment at L-elsbetiae_contig1440:13313..16106- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1440.3251.1 ID=mRNA_L-elsbetiae_contig1440.3251.1|Name=mRNA_L-elsbetiae_contig1440.3251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2794bp|location=Sequence derived from alignment at L-elsbetiae_contig1440:13313..16106- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1440:13313..16106- >mRNA_L-elsbetiae_contig1440.3251.1 ID=mRNA_L-elsbetiae_contig1440.3251.1|Name=mRNA_L-elsbetiae_contig1440.3251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig1440:13313..16106- (Laminarionema elsbetiae ELsaHSoW15)back to top |