mRNA_L-elsbetiae_contig14373.3229.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14373.3229.1
Unique NamemRNA_L-elsbetiae_contig14373.3229.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: D8LQB7_ECTSI (Similar to Phosphoacetylglucosamine mutase (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosa) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB7_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 5.070e-60
Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 1 
Query:    1 PQTPQTSHINRPEAKKRIN*RMGQVQGRLVEQKYPNLLTEECKVVKPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRA 375
            PQ+  TS  N+   K++   +MGQVQG LVE+KYPNLLTEECKV KPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAE+ A
Sbjct:   54 PQSQPTSKDNQQTRKRK---KMGQVQGNLVEKKYPNLLTEECKVAKPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEMLA 175
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A6H5JSA8_9PHAE (Phosphoacetylglucosamine mutase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA8_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.830e-56
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1 
Query:   73 VQGRLVEQKYPNLLTEECKVVKPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRA 375
            VQG LVE+KYPNLLTEECKV KPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAE+ A
Sbjct:    3 VQGNLVEKKYPNLLTEECKVAKPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEMLA 103
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A3R6ZRK8_9STRA (PGM_PMM_I domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6ZRK8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.590e-32
Identity = 63/100 (63.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +K P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGML+Q WE YA+  A A
Sbjct:    3 EKLPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLTQSWEKYAQQLANA 102
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A6A5AFR6_9STRA (PGM_PMM_I domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AFR6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 6.670e-32
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYA 363
            +K+P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGMLSQ WE YA
Sbjct:   39 EKHPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLSQSWEKYA 132
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A835YZK6_9STRA (Putative phosphoacetylglucosamine mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.980e-31
Identity = 62/98 (63.27%), Postives = 72/98 (73.47%), Query Frame = 1 
Query:   88 VEQKYPNLLTEECKVVKPDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +++ YP +     K   PDK L YGTAGFRD AELL+ST LRMGMLA LRS KTG+AVG+ VTASHNA  DNG+K+VDP GGML + WEG AE  A A
Sbjct:   16 IDRLYPGVTPAALKFPNPDKRLAYGTAGFRDAAELLESTLLRMGMLAALRSMKTGMAVGIAVTASHNAAGDNGVKLVDPGGGMLERAWEGAAEELANA 113
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A3L6VYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VYM7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.020e-30
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +K+P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGMLSQ WE YA+  A A
Sbjct:   39 EKHPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLSQSWEKYAQQLANA 138
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A397E811_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E811_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.550e-30
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +K+P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGMLSQ WE YA+  A A
Sbjct:   39 EKHPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLSQSWEKYAQQLANA 138
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A397FA29_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FA29_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.760e-30
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +K+P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGMLSQ WE YA+  A A
Sbjct:  346 EKHPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLSQSWEKYAQQLANA 445
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: W4G4H9_9STRA (Phosphoacetylglucosamine mutase n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4H9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.140e-30
Identity = 64/100 (64.00%), Postives = 75/100 (75.00%), Query Frame = 1 
Query:   94 QKYPNLLTEECKVVKP----DKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            +K+P L+ E  K  KP    +KVL YGTAGFRD A++L STF RMGMLAVLRS+K     GLMVTASHNA PDNG+K+VDP+GGMLSQ WE YA+  A A
Sbjct:   39 EKHPRLMDELPKHAKPAALANKVLAYGTAGFRDNADILGSTFHRMGMLAVLRSKKEHKITGLMVTASHNAAPDNGVKLVDPDGGMLSQSWEKYAQQLANA 138
[Close]
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Match: A0A7S2SUY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUY8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 5.650e-30
Identity = 60/82 (73.17%), Postives = 64/82 (78.05%), Query Frame = 1 
Query:  139 PDKVLKYGTAGFRDRAELLDSTFLRMGMLAVLRSR-KTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYAEVRARA 381
            P   LKYGTAGFR RAELLDSTFLRMG+LA LRSR + G AVGLMVTASHN E DNGIKMVDP+GGML   WE +A   A A
Sbjct:   25 PGVALKYGTAGFRTRAELLDSTFLRMGVLAALRSRHQQGAAVGLMVTASHNPEQDNGIKMVDPDGGMLDMAWEAHAMAVANA 106
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14373.3229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB7_ECTSI5.070e-6084.00Similar to Phosphoacetylglucosamine mutase (PAGM) ... [more]
A0A6H5JSA8_9PHAE1.830e-5695.05Phosphoacetylglucosamine mutase n=1 Tax=Ectocarpus... [more]
A0A3R6ZRK8_9STRA2.590e-3263.00PGM_PMM_I domain-containing protein (Fragment) n=1... [more]
A0A6A5AFR6_9STRA6.670e-3265.96PGM_PMM_I domain-containing protein n=1 Tax=Aphano... [more]
A0A835YZK6_9STRA4.980e-3163.27Putative phosphoacetylglucosamine mutase n=1 Tax=T... [more]
A0A3L6VYM7_9STRA1.020e-3064.00Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397E811_9STRA1.550e-3064.00Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A397FA29_9STRA2.760e-3064.00Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4G4H9_9STRA4.140e-3064.00Phosphoacetylglucosamine mutase n=7 Tax=Aphanomyce... [more]
A0A7S2SUY8_9STRA5.650e-3073.17Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14373contigL-elsbetiae_contig14373:344..2909 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.2
Seed ortholog evalue1.2e-49
Seed eggNOG ortholog2880.D8LQB7
Preferred namePGM3
KEGG rclassRC00408
KEGG koko:K01836,ko:K20523
KEGG ReactionR08193
KEGG Pathwayko00520,ko01100,ko01130,map00520,map01100,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000271,GO:0001704,GO:0001707,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004610,GO:0004614,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006030,GO:0006031,GO:0006037,GO:0006038,GO:0006040,GO:0006041,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006493,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007276,GO:0007283,GO:0007369,GO:0007498,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009272,GO:0009653,GO:0009790,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010383,GO:0010646,GO:0010647,GO:0016051,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019255,GO:0019438,GO:0019538,GO:0019637,GO:0019953,GO:0022414,GO:0023051,GO:0023056,GO:0030097,GO:0032501,GO:0032502,GO:0032504,GO:0033692,GO:0034221,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0040036,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045743,GO:0046349,GO:0046483,GO:0048232,GO:0048332,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051278,GO:0051704,GO:0055086,GO:0060438,GO:0060541,GO:0065007,GO:0070085,GO:0070589,GO:0070592,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071966,GO:0090287,GO:1901071,GO:1901073,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.phosphoacetylglucosamine mutase activity
EggNOG OGsCOG1109@1,KOG2537@2759
EC5.4.2.3
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons4
Model size381
Cds size318
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14373.3229.1prot_L-elsbetiae_contig14373.3229.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14373 344..2846 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815574.7182431-CDS-L-elsbetiae_contig14373:343..4821622815574.7182431-CDS-L-elsbetiae_contig14373:343..482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 344..482 -
1691682968.296314-CDS-L-elsbetiae_contig14373:343..4821691682968.296314-CDS-L-elsbetiae_contig14373:343..482Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 344..482 -
1622815574.7284315-CDS-L-elsbetiae_contig14373:845..9181622815574.7284315-CDS-L-elsbetiae_contig14373:845..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 846..918 -
1691682968.308887-CDS-L-elsbetiae_contig14373:845..9181691682968.308887-CDS-L-elsbetiae_contig14373:845..918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 846..918 -
1622815574.7390115-CDS-L-elsbetiae_contig14373:1588..16931622815574.7390115-CDS-L-elsbetiae_contig14373:1588..1693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 1589..1693 -
1691682968.3183522-CDS-L-elsbetiae_contig14373:1588..16931691682968.3183522-CDS-L-elsbetiae_contig14373:1588..1693Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 1589..1693 -
1622815574.7510781-CDS-L-elsbetiae_contig14373:2845..28461622815574.7510781-CDS-L-elsbetiae_contig14373:2845..2846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 2846..2846 -
1691682968.3287506-CDS-L-elsbetiae_contig14373:2845..28461691682968.3287506-CDS-L-elsbetiae_contig14373:2845..2846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14373 2846..2846 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815574.7648535-UTR-L-elsbetiae_contig14373:2846..29091622815574.7648535-UTR-L-elsbetiae_contig14373:2846..2909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14373 2847..2909 -
1691682968.3406537-UTR-L-elsbetiae_contig14373:2846..29091691682968.3406537-UTR-L-elsbetiae_contig14373:2846..2909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14373 2847..2909 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14373.3229.1

>prot_L-elsbetiae_contig14373.3229.1 ID=prot_L-elsbetiae_contig14373.3229.1|Name=mRNA_L-elsbetiae_contig14373.3229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MGQVQGRLVEQKYPNLLTEECKVVKPDKVLKYGTAGFRDRAELLDSTFLR
MGMLAVLRSRKTGLAVGLMVTASHNAEPDNGIKMVDPNGGMLSQDWEGYA
EVRARA
back to top

mRNA from alignment at L-elsbetiae_contig14373:344..2909-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14373.3229.1 ID=mRNA_L-elsbetiae_contig14373.3229.1|Name=mRNA_L-elsbetiae_contig14373.3229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2566bp|location=Sequence derived from alignment at L-elsbetiae_contig14373:344..2909- (Laminarionema elsbetiae ELsaHSoW15)
CCGCAAACTCCGCAAACCAGCCACATCAACCGACCCGAGGCCAAGAAGAG
AATTAACTAAAGAAGTGAGACGAACCCGAAGCTTTATCGCCGTTCTAGAA
TTAGCATTCGAGAGTACTGGTCGGCAGTCGGCAGGGCACCTAAAACTGGA
ATTTCTCATTCCTTTTCCGAGAAACTAGCAAGTTGAGAGTGCAGCGCAGC
GTCCGCTCCCGAAATACATCGGAGGGGTGGGTAGCTGTGCTTGTTGGTAC
CCATCCGGTAGGTGTATGATGGGGAGCACCTCGCTTTTTGCATCGTGTGG
TTCTTCTCACAGAACGGAGATGCCTGCTGCGTACCTACAGAGATCCGCTG
CAGGACTGATTGCGCAAGTGCTGATAAAAAAGATCAGAGTTCCTCCGCGC
GTGCATCGTGCAGCAGTTATTTATTATTTAGCAGCCACCAACTGCTGTAC
AATAGACCTTTCTACGCCACGATAGTATCAGCAGTATCTGCCCCAGCTTT
GTTCGTGTCGAAATCATGGCCGCGAGAGGAACCCTCTTGCACCGGTCGTG
GCTGATTTCGTGTTCTCTTCGTTCGCACACAAGAATTCCAAGAATTTCGC
CATCCAAAATGCTCCCTCTGCTCATCAGTTATCTTCGAACTAAAACACGC
CGCCGGCTTCAGTCACGCTGAGATATGATGCACGTAGACAGGGCTTATCG
TGCACAGCCGTACATAGCAGCAGCAACAGTAGTCACGCCGATATATGATA
TGCACATGCAGGACAGTGCTTATGTACCGTGCACAGCCACACATATCATA
GCAGCAGCAACAATATTAGCAGCAGCATACATACATCAACAACTGAGAGA
AACACCCTTCTCTCGGACACCACCAGCCCTGCTCCTCCGAAACATCGCGC
ACAATTTTGAGCACACAGTAATGTCATCCATCCGGAACAATTTTTGTAAC
TGTTCTTGTCACCGTGCAAAACATCTCGGGCTATACAATGGTCGTGCTGC
GTACAGCACTCAGTAAACACCACCTAGAATCCTATAAAGCGGCGATAACA
TCTGGCCTCGCATAAGGTACAACTTGTACATACAATACAATAATACTACT
ACATGCGTGTTTGAAACAGTGGCGAGGGGGTTTCGTGCAGCAAGAACAGA
GCCCCCCCCCCCCGCTTGTTTTTTTGTCCTCCGCTGGCGCTGCGCAAACC
TTTCGGGGATCAACAGTGGGACAGGTGCAAGGACGTCTCGTGGAGCAGAA
GTACCCAAACCTTCTCACGGAGGAGTGCAAGGTGGTCAAGCCCGACAAAG
TGCTCAAGTATGGGACCGCCGGTGAGAGTGCTTCGAGTCCGTTCGAGTTA
TAAGTGGGAATCGTTAGGTGGGCGTTATTGTAGGGAAATACAAATGTTTG
GTGAATCCGGTTTCTGTTTTCCCGAGCAGAGCGAGAGGGGGTCATATTCG
TTCAGCGGGAAGGGCAACAACAGAGAACGAACACAGCAGTTGGGCCAGCC
GCCACCGTTGGCGTGGTCTCCTTCTCCGTCCTCCCGACCGCGGCGTCGGC
CCCCGAAAAGCCGGCGACAAACGGTCTGCGAGAGCCGTCTAATGCGAAAC
CATGAGACGTCTGCTGTTCCACGCACCCCATGCACGGCGGATCTGAAAGC
TTTCGTGTGAAATGCATGTATCTGCTGTGATCGGGCGAGGTTCGGGCCGC
CGCACGTGGGAAGAAGGGACTCCACCACGATGCCGGCAGGGAATTTCCCA
CACTTTCCGAAATGCCATCCAGCTCCTGGGATGGAGACCGGCTGGTAACT
CTCGGCAGCCGCCATGCGCCATGACCCCGAAGGAAAAGAAAATAACGCAC
ATATGGTACCATTTTCGGGGGATGAAATGGTTCAGAAGTCTTTGCTGCCT
GAATCTTGAACGGAGAATCTGGACCTTCTCTCGCCGCCCCCCCCTTGCCG
CTGCTCCTCTCCCCTCCCCCGCCTTCTCCTCCCCCCCCTAGGGTTCCGGG
ACCGCGCGGAGCTGCTAGACTCGACCTTCCTGCGCATGGGCATGCTGGCG
GTTTTGAGAAGCCGGTACGTGTGCATGCACGTTGCGGCCTGAATTCTCCC
AGGGGCCTTCTTCTGTTGTAGACACCGAGGGTGCCCGATAGAAGTTGCAC
GCCGGGGTCTCAGCAGGCAAGGCATGGGGGGCATGTTCGGTGGTGTGTAG
TGTTCCAAGTGTAATCTGCGCCTTCCGATGCTCAAACTAGGTTCTTCATT
TTCTCCCCCGCCCCACCCCCTTTCTATTTTGTTCGTTCTCTGGCTATTCC
TCTTTCCTAAAAATACTTTCCTCGGGGTCTTTGTGTGTGTAGTTATCGGC
TGAGACGCGTGCGCGTGCTTGAATTTTTCTTCGCCATTTGTTTCTTGCCC
GGGGATTCTCTCTATTTTCGTTTCCAGCAAGACCGGCCTGGCCGTAGGCC
TGATGGTGACCGCGTCGCACAACGCCGAGCCCGACAACGGCATCAAGATG
GTGGACCCGAACGGCGGCATGCTGTCTCAGGACTGGGAGGGGTACGCGGA
GGTGCGTGCTCGCGCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig14373:344..2909-

>mRNA_L-elsbetiae_contig14373.3229.1 ID=mRNA_L-elsbetiae_contig14373.3229.1|Name=mRNA_L-elsbetiae_contig14373.3229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig14373:344..2909- (Laminarionema elsbetiae ELsaHSoW15)
AATGGGACAGGTGCAAGGACGTCTCGTGGAGCAGAAGTACCCAAACCTTC
TCACGGAGGAGTGCAAGGTGGTCAAGCCCGACAAAGTGCTCAAGTATGGG
ACCGCCGTGGGACAGGTGCAAGGACGTCTCGTGGAGCAGAAGTACCCAAA
CCTTCTCACGGAGGAGTGCAAGGTGGTCAAGCCCGACAAAGTGCTCAAGT
ATGGGACCGCCGGGTTCCGGGACCGCGCGGAGCTGCTAGACTCGACCTTC
CTGCGCATGGGCATGCTGGCGGTTTTGAGAAGCCGGGTTCCGGGACCGCG
CGGAGCTGCTAGACTCGACCTTCCTGCGCATGGGCATGCTGGCGGTTTTG
AGAAGCCGCAAGACCGGCCTGGCCGTAGGCCTGATGGTGACCGCGTCGCA
CAACGCCGAGCCCGACAACGGCATCAAGATGGTGGACCCGAACGGCGGCA
TGCTGTCTCAGGACTGGGAGGGGTACGCGGAGGTGCGTGCTCGCGCGCAA
GACCGGCCTGGCCGTAGGCCTGATGGTGACCGCGTCGCACAACGCCGAGC
CCGACAACGGCATCAAGATGGTGGACCCGAACGGCGGCATGCTGTCTCAG
GACTGGGAGGGGTACGCGGAGGTGCGTGCTCGCGCG
back to top