mRNA_L-elsbetiae_contig14352.3219.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI) HSP 1 Score: 226 bits (576), Expect = 1.910e-72 Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDALVGVTGTT 429 MVDTA+E FG LHVAFNNAG+FR P ADITEDTID LL +NVKSLA+CFKYQIPAM +A GKGSIIVNTSSTA+RT+ALP M GGGMY+ASKAAAEMLMK+AAIE AAS VRVNSV PGHVETPIYGEMPR+ LV VTGTT Sbjct: 72 MVDTAIEKFGGLHVAFNNAGVFRAVPFADITEDTIDDLLNINVKSLAWCFKYQIPAMKNTAGGKGSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIEGAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTT 214
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: D8LQS5_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS5_ECTSI) HSP 1 Score: 199 bits (506), Expect = 2.190e-63 Identity = 104/143 (72.73%), Postives = 118/143 (82.52%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDALVGVTGTT 429 MVDTA++ FG LHVAFNNAG++R+AP ADI EDTID LL +NVKSLA+CFKYQIPAM SA GKGSIIVNTSSTA+R SA P M G GMYAASKAAAE+LMK+AAIE AAS VRVNSV G V+TPI+G+MP + LV G T Sbjct: 1 MVDTAIQKFGGLHVAFNNAGVYRSAPFADIMEDTIDDLLNINVKSLAWCFKYQIPAMKDSAGGKGSIIVNTSSTALRPSASPGMTGSGMYAASKAAAELLMKYAAIEGAASGVRVNSVARGLVKTPIFGDMPDETLVAFAGAT 143
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI) HSP 1 Score: 198 bits (504), Expect = 1.690e-61 Identity = 102/143 (71.33%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDALVGVTGTT 429 MVDTA+E FG LHVAFNNAG+F+T P DITEDTID +L NVKS+A+C KYQIPAM +A GKGSIIVNTS T +R SALP + G GMY+ASKAAAEMLMK+AAIE AAS VRVNSV PG VETPI+G+MP D LV G T Sbjct: 74 MVDTAIEKFGGLHVAFNNAGVFKTVPFVDITEDTIDDILNTNVKSIAWCLKYQIPAMKDTAGGKGSIIVNTSVTGLRPSALPGLTGAGMYSASKAAAEMLMKYAAIEGAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGAT 216
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A835ZCI5_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI5_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.430e-34 Identity = 73/152 (48.03%), Postives = 100/152 (65.79%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRD----------ALVGVTGT 426 +VD A+ +G LH+AF NAG + AP+ +TE+ D + VNVKS+AF K+ +PA+ S G GS+I+N+S A+R +A PA GGG+Y+ASKAAA+M+MK+AAIEA+ RVNS+ PG V+T I GE D +LVG GT Sbjct: 75 IVDAALSAYGKLHIAFLNAGTYGGAPVDQVTEELFDKIFDVNVKSVAFGLKHVLPAIEKSGGG-GSVIINSSGMALRATANPAFAGGGLYSASKAAADMVMKYAAIEASKHKTRVNSIAPGIVQTAIMGEGMTDESYNAFAAPVSLVGRVGT 225
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA) HSP 1 Score: 118 bits (296), Expect = 3.460e-30 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDAL 408 +VD A+ET+GA++V+F NAGI+RTA A++T+ +D L NVK +A+ KYQ+ A+ S GKGS+++N+S +A P G YA++KAAA++LMK+AAIEA RVNS+ PG V T + G+ P DA Sbjct: 73 LVDKALETYGAVNVSFINAGIYRTAVAAEVTKTILDELYDTNVKGVAYALKYQLAAIEKSG-GKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAIDHGTRVNSIAPGVVATGL-GDFPEDAF 206
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A835YUN2_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN2_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.110e-29 Identity = 63/130 (48.46%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGE 390 MV A+ T+G LHVAF NAG + AP+ +TE+ + + NVKS+AF K+ +PA+ S G GS++VN+S +R A P G G+YA SKAAA+M+M++AAIEA+ RVNSV PG V T + GE Sbjct: 76 MVKAALSTYGKLHVAFLNAGTYGGAPVDQVTEELFNKIFDANVKSVAFGLKHVLPAIERSGGG-GSVVVNSSCMGLRAPANPTFTGAGLYAGSKAAADMIMRYAAIEASKHKTRVNSVAPGIVRTELMGE 204
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A835YKB8_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB8_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.120e-28 Identity = 61/136 (44.85%), Postives = 90/136 (66.18%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDAL 408 +VDTA+ET+G L+V+F NAG+ R P++++ +D L VNVK +A+ KYQ+PA+ S GKGS+++N+S +A P +G G YA++KAA ++LMK+AAIEA RVNS+ G V T + G P +A Sbjct: 75 LVDTALETYGLLNVSFINAGVHRAKPISEVDASMLDTLYDVNVKGVAYALKYQLPAIEKSG-GKGSVVINSSCLGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAAGAVFTNLVGA-PEEAF 208
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A836C9I6_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I6_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.450e-27 Identity = 60/125 (48.00%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVET 375 +VD +E + L V+F NAGI+R A L ++TE T+D L NVK +AF KYQ+PA+ S G GSI++N+S + +P G G ++ASKA A+MLM+HAAIEA+ RVNS+ PG V T Sbjct: 68 LVDAVLEKYHRLDVSFINAGIYRPATLTEVTEATVDELFATNVKGVAFALKYQLPAIEKSG-GHGSIVINSSVAGRVVAEMPEFGGNGPFSASKAGADMLMRHAAIEASRHGTRVNSIAPGIVHT 191
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A835YQ90_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ90_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.290e-27 Identity = 57/136 (41.91%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDAL 408 +VDT +ET+G+L+++F NAG+ P++++ +D L VNVK +A+ KYQ+PA+ S GKGS+++N+S +A P +G G YA++KAA ++LMK+AAIEA RVNS+ PG + T + E P + Sbjct: 72 LVDTTLETYGSLNLSFINAGVHLAKPISEVDGSMLDKLYDVNVKGVAYALKYQLPAIEKSG-GKGSVVINSSCAGSTVTAFPIFKGNGPYASTKAAVDILMKYAAIEAIDHGTRVNSIAPGAIYTSLV-EAPEEVF 205
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Match: A0A836CAF4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF4_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.660e-26 Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 1 Query: 1 MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFKYQIPAMAASAEGKGSIIVNTSSTAIRTSALPAMEGGGMYAASKAAAEMLMKHAAIEAAASSVRVNSVVPGHVETPIYGEMPRDA 405 +VD ++ + L V+F NAGI R A D+T++ +D LL NVKS+A KYQ+PA+A S G G+I++N+S G G YAA+KAAA+MLM+HAA+EA+ ++NS+ PG V+T + ++P DA Sbjct: 73 LVDAVLDKYHRLDVSFINAGIHRAAKAVDVTDEMLDELLAANVKSVALGLKYQLPAIAKSGGG-GAIVINSSIAGSNVKTRKEFVGNGPYAATKAAADMLMRHAAVEASKQGTQINSIAPGVVKTNLL-DLPDDA 205 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14352.3219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14352.3219.1 >prot_L-elsbetiae_contig14352.3219.1 ID=prot_L-elsbetiae_contig14352.3219.1|Name=mRNA_L-elsbetiae_contig14352.3219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp MVDTAVETFGALHVAFNNAGIFRTAPLADITEDTIDALLGVNVKSLAFCFback to top mRNA from alignment at L-elsbetiae_contig14352:385..2052+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14352.3219.1 ID=mRNA_L-elsbetiae_contig14352.3219.1|Name=mRNA_L-elsbetiae_contig14352.3219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1668bp|location=Sequence derived from alignment at L-elsbetiae_contig14352:385..2052+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14352:385..2052+ >mRNA_L-elsbetiae_contig14352.3219.1 ID=mRNA_L-elsbetiae_contig14352.3219.1|Name=mRNA_L-elsbetiae_contig14352.3219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig14352:385..2052+ (Laminarionema elsbetiae ELsaHSoW15)back to top |