mRNA_L-elsbetiae_contig14351.3218.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI) HSP 1 Score: 276 bits (707), Expect = 3.780e-86 Identity = 139/183 (75.96%), Postives = 150/183 (81.97%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRS---VSFASGGSGGPGEGR---PPVSQGMTEYIGFVSIVLVRGENLVHAGFGQVR 531 RSLLERE+N CADCTA+LPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLD WT QVEFMA +GN M NSFLEYHVPS W KPSHLEPR YRD+YIKAKYQ RLFEFRG+KKPVIK PP VD + VS G +GG G G S GMTEYIGFV+I LVRGE+LVHAGFGQ++ Sbjct: 151 RSLLEREDNIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNKMVNSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGVDGDAGGDGSGERGGSGFSHGMTEYIGFVNINLVRGESLVHAGFGQLQ 333
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE) HSP 1 Score: 276 bits (707), Expect = 6.570e-86 Identity = 140/181 (77.35%), Postives = 149/181 (82.32%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRS---VSFASGGSGGPGEGR---PPVSQGMTEYIGFVSIVLVRGENLVHAGFGQ 525 RSLLEREEN CADCTA+LPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLD WT QV+FMA +GN MANSFLEYHVPS W KPSHLEPR YRD+YIKAKYQ RLFEFRG+KKPVIK PP VD + VS A G +GG G G VS GMTEYIGFV+I L RGE+LVHAGF Q Sbjct: 189 RSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVDFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGADGDAGGDGAGERGGSGVSHGMTEYIGFVNINLARGESLVHAGFSQ 369
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A5D6Y1N9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1N9_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.460e-35 Identity = 80/182 (43.96%), Postives = 100/182 (54.95%), Query Frame = 1 Query: 10 LEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRSVSF---------------ASGGSGGPGEGRP--PVSQGMTEYIGFVSIVLVRGENL 504 L R ENA+CADC A P WA+V G F+CTQCAG HRSLGVH+S VLS LD WT QV+ + VGN N +E+ VP+ +PKP R R+ YI+AKY+D LF+ P ++ AV S A GGSG G P + GM EY+G + I LV G +L Sbjct: 16 LARPENASCADCDAPQPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDAWTDAQVQSVETVGNDALNGLMEFSVPTQFPKPHAESARSERERYIRAKYEDALFKAH----PSRRKQHAVSSSSXXXXXXXXXXXXSTAVSALGGSGDRHSGATAAPATHGMVEYVGVLVIELVEGAHL 193
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A1W0A2J3_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2J3_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.680e-35 Identity = 79/177 (44.63%), Postives = 101/177 (57.06%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEF--RGRKKPVIKRPPA-VDRSVSFASGGSGGPGEGRPPVSQGMTEYIGFVSIVLVRGENLVHAGFG 522 + LL EEN CADCTA P WA+V G F+CTQCAG HRSLGVH+S VLS LD WT EQ++ +A +GN N LE+ VP KP+ PR R+ YI AKY ++ F R++ + P + R+V+ +S GS GM EYIG ++I LV G NL G Sbjct: 43 QELLANEENLHCADCTAMHPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDRWTREQIQHVAAIGNAKLNDTLEFSVPVNIRKPTGDCPREVREEYIVAKYVEQSFRMGPNKRRQEAMSSPSRPIARNVAASSQGS-----------HGMVEYIGILTIELVEGSNLAAMDVG 208
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A1X7VMW2_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VMW2_AMPQE) HSP 1 Score: 129 bits (325), Expect = 9.940e-34 Identity = 74/170 (43.53%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEP-RGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRSVSFASGGSGGPGEGRPPVSQGMTEYIGFVSIVLVRGENLV 507 + LLE EN+ CADCT PTWAS N GVF+C QCAG HRSLGV S VLS LD W+ EQ++FM GN N+ LE+ VP P E R RD YI+AKY ++LF +K+ PP + + +S P + M EYIG + + L+ G+NL+ Sbjct: 6 KELLEYPENSQCADCTEPNPTWASTNWGVFICVQCAGVHRSLGVEHSFVLSCSLDNWSKEQIDFMKARGNKEMNALLEHSVPKTIEVPFGSETDRDTRDKYIRAKYIEQLFY---KKEGRTPNPPKRMKRIGSSSSRHSPPSPSLRDAA--MIEYIGIIEVELIEGKNLI 170
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A2D4BL46_PYTIN (ADP-ribosylation factor GTPase-activating protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL46_PYTIN) HSP 1 Score: 134 bits (337), Expect = 3.490e-33 Identity = 75/173 (43.35%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 10 LEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEF---RGRKKPVIKR-----PPAVDRSVSFASGGSGGPGEGRPPVSQGMTEYIGFVSIVLVRGENL 504 ++R ENA+CADC A P WASVN G F+CTQCAG HRSLGVH+S VLS LD WT+ QV+ + VGN N LE+ VP +PKP R R+ +I+AKY+D LF+ + RK+ V+ P + V+ G + R GM E++G + I L+ G +L Sbjct: 513 MQRVENASCADCNAPAPRWASVNHGCFICTQCAGVHRSLGVHVSFVLSCTLDRWTSAQVDGVERVGNDALNETLEFSVPDDYPKPHAESSRPERERFIRAKYEDELFKVSPDKPRKRAVLSSSSSSAPTSYAEDVAATDGNN--VAARRSGTGVGMIEFVGVMVIELLEGIDL 683
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A6A2XL51_HIBSY (ADP-ribosylation factor GTPase-activating protein AGD12 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XL51_HIBSY) HSP 1 Score: 126 bits (317), Expect = 3.940e-32 Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVG-NGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRS-VSFASGGSGGPGEGRP-PVSQGMTEYIGFVSIVLVRGENL 504 R+LL + +N CADC+A P WAS N GVF+C +C H+SLG H+SKV+SV LD WT EQ++ +AEVG N AN+ E H+P + KP R+ +IK+KY+D+ F KP ++ S SF S R P +GM E+IG + + ++RG NL Sbjct: 17 RNLLNQSDNRICADCSALDPKWASTNIGVFICGECCDVHKSLGTHVSKVMSVSLDEWTIEQIDAVAEVGGNSTANAIYEAHIPEGYSKPGPNASVEERNKFIKSKYEDQEFS-----KPSLRISSGKSSSNSSFKIFSSKFMDSFRLIPEQEGMVEFIGLLKVTVLRGSNL 182
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A1V9Z495_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z495_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.720e-32 Identity = 75/175 (42.86%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 7 LLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVGNGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEF--RGRKKPVIKRPPA-VDRSVSFASGGSGGPGEGRPPVSQGMTEYIGFVSIVLVRGENLVHAGFG 522 +L +EN CADC A P WA+V G F+CTQCAG HRSLGVH+S VLS LD WT Q+E ++ GN N LE+ VP KPS PR R++YI AKY D+ F R++ + P V R+ + +S GS GM EY+G ++I LV G L G Sbjct: 59 ILALDENLQCADCNAPHPKWATVTHGGFICTQCAGVHRSLGVHLSFVLSCTLDRWTRTQLEAVSSGGNARLNETLEFSVPPTTAKPSPDWPRDPREAYIVAKYVDKAFRMGPNKRRQEAMSAPACPVARNAAASSHGS-----------HGMVEYVGILTIELVEGAGLAAMDVG 222
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A835RYD3_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RYD3_VANPL) HSP 1 Score: 123 bits (309), Expect = 1.150e-31 Identity = 73/171 (42.69%), Postives = 99/171 (57.89%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVG-NGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRSVSFASGGSGGPGEGRP--PVSQGMTEYIGFVSIVLVRGENL 504 + LL + +N CADC A P WAS N GVF+C +C+G HRSLG HISKVLSV LD W+ E++E M EVG N ANS E +P +PKP+ + R +I+AKY EF+ KP ++ V SF S S G + GM E+IG + + +++G+NL Sbjct: 15 KELLHKSDNRICADCCAPDPKWASANIGVFICVKCSGVHRSLGTHISKVLSVTLDEWSDEEIESMVEVGGNSYANSIYEAFLPQDYPKPTADSNQEDRAKFIRAKY-----EFQEFLKPSLR---IVSSKSSFRSCDSSKDKYGLDLETSTAGMVEFIGILKVKILKGKNL 177
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Match: A0A2U1PF95_ARTAN (ADP-ribosylation factor GTPase-activating protein AGD12 n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PF95_ARTAN) HSP 1 Score: 125 bits (314), Expect = 1.760e-31 Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 1 RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDGWTAEQVEFMAEVG-NGMANSFLEYHVPSAWPKPSHLEPRGYRDSYIKAKYQDRLFEFRGRKKPVIKRPPAVDRSVSFASGGSGGPGEGRPPVSQGMTEYIGFVSIVLVRGENL 504 + LL++ +N CADC A P WAS N GVF+C +C G HRSLGVHISKVLSV LD WT +V+ M EVG N ANS E ++P KP + +R ++I++KY+ L EF KP ++ + + S P ++GM E+IG + I +V+G+NL Sbjct: 19 KELLQQRDNRTCADCGAPDPKWASANIGVFICLKCCGVHRSLGVHISKVLSVTLDSWTDAEVDAMIEVGGNASANSIYEAYIPQGISKPGPDASQDHRSNFIRSKYE--LQEFL---KPSLR---ILSTNASSLKASLSKKAMKTMPSTKGMVEFIGVLKITVVKGKNL 179 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14351.3218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14351.3218.1 >prot_L-elsbetiae_contig14351.3218.1 ID=prot_L-elsbetiae_contig14351.3218.1|Name=mRNA_L-elsbetiae_contig14351.3218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp RSLLEREENAACADCTARLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLback to top mRNA from alignment at L-elsbetiae_contig14351:1891..3968+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14351.3218.1 ID=mRNA_L-elsbetiae_contig14351.3218.1|Name=mRNA_L-elsbetiae_contig14351.3218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2078bp|location=Sequence derived from alignment at L-elsbetiae_contig14351:1891..3968+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14351:1891..3968+ >mRNA_L-elsbetiae_contig14351.3218.1 ID=mRNA_L-elsbetiae_contig14351.3218.1|Name=mRNA_L-elsbetiae_contig14351.3218.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1062bp|location=Sequence derived from alignment at L-elsbetiae_contig14351:1891..3968+ (Laminarionema elsbetiae ELsaHSoW15)back to top |