mRNA_L-elsbetiae_contig14347.3211.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: D7FVN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN7_ECTSI) HSP 1 Score: 151 bits (382), Expect = 1.300e-40 Identity = 114/130 (87.69%), Postives = 121/130 (93.08%), Query Frame = 1 Query: 28 DARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIE 417 D R G VKNI AEL K+ PEEVF QFDTDGSGLIDFDEFR MLPQLGI+I+MPKALR+FRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGF P+ALL+PLDAFXXXXXXXXXXXXXXXXFFLLQ+LGIE Sbjct: 62 DQRGG-VKNIMAELTKKTPEEVFAQFDTDGSGLIDFDEFRTMLPQLGISITMPKALRFFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFTPSALLTPLDAFXXXXXXXXXXXXXXXXFFLLQFLGIE 190
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: A0A836CDL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL9_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.220e-31 Identity = 80/133 (60.15%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 22 EEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 +E A + V+ + + K PPE +F FD D G IDF+EF+A+LPQLGI +S+PKALRYFR XXXXXXXXXXXXXX+ALFAVDPD+GNPVGFAPN+LLSP+DAF FFLLQ+LG+EV Sbjct: 20 DETANALAVQELKKTMGKLPPEAIFAIFDKDNDGTIDFEEFKAILPQLGIEVSLPKALRYFRTCXXXXXXXXXXXXXXMALFAVDPDNGNPVGFAPNSLLSPMDAFDMFDTDKSGNIDEDEFFFLLQFLGVEV 152
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: A0A7S2FTK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FTK3_9STRA) HSP 1 Score: 103 bits (258), Expect = 7.780e-26 Identity = 83/113 (73.45%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 82 PEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 PEEVF +FD DGSG ID EF+ MLP+LG+ +S KAL+YF+ XXXXXXXXXXXXXXVAL+A DP+SGNP+GFAPN LL+P DAFXXXXXXXXXXXXXXXXFF+L+YL ++V Sbjct: 9 PEEVFMEFDVDGSGFIDLAEFKDMLPKLGVKMSSAKALKYFKMCXXXXXXXXXXXXXXVALYACDPNSGNPIGFAPNNLLTPKDAFXXXXXXXXXXXXXXXXFFVLEYLQLDV 121
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.700e-23 Identity = 71/119 (59.66%), Postives = 87/119 (73.11%), Query Frame = 1 Query: 73 KRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEVGSA 429 K PPEEVFK+FDTDGSG ID +EF+ ML +L I +S KA++Y XXXXXXXXXXXXXXXX ALFA DP++GNP+GFAPNALL+P+DAF +F+L+YL +EV A Sbjct: 79 KMPPEEVFKRFDTDGSGEIDLEEFKVMLKKLKIHMSSAKAVKYXXXXXXXXXXXXXXXXXXXALFACDPNNGNPIGFAPNALLTPIDAFEMFDEDGSGNINEDEFYFVLEYLKLEVSDA 197
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: F0YIW6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIW6_AURAN) HSP 1 Score: 93.2 bits (230), Expect = 2.170e-21 Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 82 PEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 PE VF++FDTD SG I+ +EF+ ML +L I +S KAL+YF+ XXXXXXXXXXXXXX ALFA DP+ GNP+GF+PNALL P DAF FF+L+YL ++V Sbjct: 3 PEAVFEKFDTDNSGRINLEEFKIMLGKLKINMSSAKALKYFKMCXXXXXXXXXXXXXXXALFACDPNGGNPIGFSPNALLMPQDAFEMFDEDGTGTINEDEFFFVLEYLKLDV 115
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: A0A2P4XZ17_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XZ17_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 3.910e-21 Identity = 72/140 (51.43%), Postives = 87/140 (62.14%), Query Frame = 1 Query: 13 GGDEE----DARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 GGDEE A E + + K PPEE+FK++DTDGSG I EF AMLP LGI+IS KA+R XXXXXXXXXXXXXXX +A+FAVDP SGN GF+P+ LL P DAF +L+Y G++V Sbjct: 63 GGDEELDEAQAAEAEKRKVAVLNAKLPPEELFKKYDTDGSGNISVSEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNTFGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 202
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: G4Z5G0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z5G0_PHYSP) HSP 1 Score: 95.5 bits (236), Expect = 4.650e-20 Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 19 DEEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 DE++A E + + K PEE+FK++DTDGSG I EF AMLP LGI+IS KA+R XXXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAF +L+Y G++V Sbjct: 71 DEQEAAEAEKRKVAVLNSKLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 204
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: D0NE77_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NE77_PHYIT) HSP 1 Score: 95.1 bits (235), Expect = 6.170e-20 Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 19 DEEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 DE++A E + + K PEE+FK++DTDGSG I EF AMLP LGI+IS KA+R XXXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAF +L+Y G++V Sbjct: 69 DEKEAAEAEKRKVAVLNSKLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 202
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: A0A8J5JEG2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JEG2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 7.250e-20 Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 19 DEEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 DE++A E + + K PEE+FK++DTDGSG I EF AMLP LGI+IS KA+R XXXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAF +L+Y G++V Sbjct: 69 DEKEAAEAEKRKVAVLNSKLSPEELFKKYDTDGSGNISASEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXXKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 202
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Match: W2QAT0_PHYPN (Uncharacterized protein n=50 Tax=Phytophthora TaxID=4783 RepID=W2QAT0_PHYPN) HSP 1 Score: 93.6 bits (231), Expect = 2.530e-19 Identity = 67/134 (50.00%), Postives = 86/134 (64.18%), Query Frame = 1 Query: 19 DEEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAMLPQLGITISMPKALRYFRXXXXXXXXXXXXXXXXVALFAVDPDSGNPVGFAPNALLSPLDAFXXXXXXXXXXXXXXXXFFLLQYLGIEV 420 DE++A E + + K PE++FK++DTDGSG I EF AMLP LGI+IS KA+R XXXXXXXXXXXXXX +A+FAVDP SGNP+GF+P+ LL P DAF +L+Y G++V Sbjct: 69 DEKEAAEAEKRKVAVLNSKLSPEDLFKKYDTDGSGNISAPEFLAMLPDLGISISAAKAMRIXXXXXXXXXXXXXXXXFKMAMFAVDPVSGNPLGFSPSTLLGPRDAFELFDEDGTGQIDELEFADVLEYFGMDV 202 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14347.3211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14347.3211.1 >prot_L-elsbetiae_contig14347.3211.1 ID=prot_L-elsbetiae_contig14347.3211.1|Name=mRNA_L-elsbetiae_contig14347.3211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp GGSAGGDEEDARSGEVKNITAELVKRPPEEVFKQFDTDGSGLIDFDEFRAback to top mRNA from alignment at L-elsbetiae_contig14347:2189..3745- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14347.3211.1 ID=mRNA_L-elsbetiae_contig14347.3211.1|Name=mRNA_L-elsbetiae_contig14347.3211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1557bp|location=Sequence derived from alignment at L-elsbetiae_contig14347:2189..3745- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14347:2189..3745- >mRNA_L-elsbetiae_contig14347.3211.1 ID=mRNA_L-elsbetiae_contig14347.3211.1|Name=mRNA_L-elsbetiae_contig14347.3211.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig14347:2189..3745- (Laminarionema elsbetiae ELsaHSoW15)back to top |