mRNA_L-elsbetiae_contig14286.3179.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: D7G5V3_ECTSI (GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V3_ECTSI) HSP 1 Score: 242 bits (617), Expect = 2.640e-78 Identity = 113/124 (91.13%), Postives = 120/124 (96.77%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +VQYCQG+NYI SLFLLYMPEENAFWMLVA+M R CAPLRELFLPGM+KAQEFQFVMDSLT KHC+KLSNQILA+NLTP+MYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK Sbjct: 124 EVQYCQGVNYITSLFLLYMPEENAFWMLVATMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 247
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE) HSP 1 Score: 243 bits (621), Expect = 6.690e-75 Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +VQYCQGINYI SLFLLYMPEENAFWMLVASM R CAPLRELFLPGM+KAQEFQFVMDSLT KHC+KLSNQILA+NLTP+MYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK Sbjct: 477 EVQYCQGINYITSLFLLYMPEENAFWMLVASMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 600
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A835YV67_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV67_9STRA) HSP 1 Score: 166 bits (421), Expect = 5.850e-46 Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 1 Query: 19 GINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 GINYI +LFLLYMPEE AFWMLV M R APLRELFLPGM+KA+EF VMDSLT K KL + +++ P+MYA WF+T FTQ FPY+L TR WD+FL EDWK+ YRVCLALFK Sbjct: 466 GINYIAALFLLYMPEEEAFWMLVCVMHRPQAPLRELFLPGMLKAREFNHVMDSLTEKFVPKLFRHLQKHDIQPTMYAHPWFITCFTQAFPYELCTRTWDVFLEEDWKIMYRVCLALFK 583
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A7S2KF21_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF21_9STRA) HSP 1 Score: 133 bits (335), Expect = 4.470e-35 Identity = 66/124 (53.23%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ +I +FL YMPEE AFW LV M LR+LF GM AQ+ +V D LT K KL+ N+ SM+ATQW +T +T FP+DLVTRVWD FL E WKV YRV LAL K Sbjct: 206 EVGYCQGMGFIAGMFLTYMPEEQAFWQLVGVMNEEPCNLRDLFSVGMAGAQQVLYVADKLTRKVLPKLAKHFDRENVHISMFATQWLVTIYTSNFPFDLVTRVWDCFLYEGWKVVYRVMLALLK 329
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A225W6Z9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6Z9_9STRA) HSP 1 Score: 130 bits (326), Expect = 5.800e-34 Identity = 61/124 (49.19%), Postives = 81/124 (65.32%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ ++ ++FL YMPE+ AFW+LVA + L +L+ P M K E FV + L ++ +LS + + L P+MY TQWFLT FT FP++ VTRVWD FL E WKV YRV LAL K Sbjct: 197 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQYMPQLSAHLESEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALLK 320
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A0P1B616_PLAHL (Plant adhesion molecule 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B616_PLAHL) HSP 1 Score: 130 bits (326), Expect = 6.020e-34 Identity = 63/124 (50.81%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ +I ++FL YMPE+ AFW+LVA + L +L+ P M K E +V L + LS + L P+MY TQWFLT FT FP+DLVTRVWD FL E WKV YRV LAL K Sbjct: 184 EVGYCQGMGFISAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVLEVTYVFQGLLKQQMPHLSTHLENEGLHPTMYLTQWFLTLFTYNFPFDLVTRVWDAFLHEGWKVIYRVALALMK 307
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A8J5IBD6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IBD6_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.590e-33 Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ ++ ++FL YMPE+ AFW+LVA + L +L+ P M K E FV + L + +LS + L P+MY TQWFLT FT FP++ VTRVWD FL E WKV YRV LAL K Sbjct: 148 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDTFLHEGWKVIYRVALALMK 271
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A7S1G1I4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1I4_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.400e-33 Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 10 YCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 YCQG+N++ ++FL+YM EE+AFWMLV M LREL+ GM+K+Q +V L + KL+ N+ +M+ATQWFLT ++ F +DLVTR+WD+FL+E WK+ YRV LAL K Sbjct: 252 YCQGMNFVTAMFLMYMSEEDAFWMLVHVMNFEPCKLRELYTVGMIKSQRVLYVGSQLIKHYLPKLNRHFETENICYNMFATQWFLTIYSNSFSFDLVTRIWDIFLVEGWKIVYRVMLALLK 372
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: H3GE06_PHYRM (Rab-GAP TBC domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GE06_PHYRM) HSP 1 Score: 127 bits (318), Expect = 8.120e-33 Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ ++ ++FL YMPE+ AFW+LVA + L +L+ P M K E FV +L + +LS + L P+MY TQWFLT FT FP++ VTRVWD FL E WKV YRV LAL K Sbjct: 197 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFQALLKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDSFLHEGWKVIYRVALALLK 320
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: D0MU62_PHYIT (Rab-GAP TBC domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MU62_PHYIT) HSP 1 Score: 126 bits (317), Expect = 1.430e-32 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 372 +V YCQG+ ++ ++FL YMPE+ AFW+LVA + L +L+ P M K E F+ + L + +LS + L P+MY TQWFLT FT FP++ VTRVWD FL E WKV YRV LAL K Sbjct: 201 EVGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALMK 324 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14286.3179.1 >prot_L-elsbetiae_contig14286.3179.1 ID=prot_L-elsbetiae_contig14286.3179.1|Name=mRNA_L-elsbetiae_contig14286.3179.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAback to top mRNA from alignment at L-elsbetiae_contig14286:3054..4057- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14286.3179.1 ID=mRNA_L-elsbetiae_contig14286.3179.1|Name=mRNA_L-elsbetiae_contig14286.3179.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1004bp|location=Sequence derived from alignment at L-elsbetiae_contig14286:3054..4057- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14286:3054..4057- >mRNA_L-elsbetiae_contig14286.3179.1 ID=mRNA_L-elsbetiae_contig14286.3179.1|Name=mRNA_L-elsbetiae_contig14286.3179.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig14286:3054..4057- (Laminarionema elsbetiae ELsaHSoW15)back to top |