mRNA_L-elsbetiae_contig1428.3176.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A6H5JYW1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW1_9PHAE) HSP 1 Score: 201 bits (511), Expect = 5.200e-60 Identity = 100/132 (75.76%), Postives = 117/132 (88.64%), Query Frame = 2 Query: 5 GAVGKVLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPDWDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQQL 400 G+VGKVLLADFGSSFR+RGG G + VKEYT+AYSAPEVV++S E+ KADVWSLGVIAYV+V GHHPFDPTS+ADDEEI+E+IL+S+PDW+GV+ KAATLIR+MLSRNPEDRPS +EVLQ SWLQQL Sbjct: 279 GSVGKVLLADFGSSFRLRGGR-----GHKKVKEYTIAYSAPEVVENSAEVDQKADVWSLGVIAYVLVVGHHPFDPTSEADDEEITESILHSEPDWEGVDLKAATLIRRMLSRNPEDRPSAQEVLQSSWLQQL 405
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A835ZES4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES4_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.820e-23 Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRTVKEYTV--AYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPD-----WDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQQ 397 V LADFGS+FR R G+ K+YT AYS PEVV + + ADV+SLGV+AY+++ G HPFDP+ DA +E++ I+ +PD W V+ A L+R+ LS+ P RP+ +L H W+QQ Sbjct: 232 VKLADFGSAFRTR-------AGVPRRKDYTTTAAYSPPEVVSGAAAATEAADVFSLGVVAYILLTGRHPFDPSGDASEEDVLARIVSDEPDFSDAAWGDVDAAARDLVRRALSKAPSARPTASAMLAHPWVQQ 357
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A835Z8F3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F3_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.330e-23 Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 2 Query: 17 KVLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPDWDG-----VEPKAATLIRQMLSRNPEDRPSIREVLQHSW 388 +V+LADFGS+F + ++YT AYSAPEV+ S I KAD+WS+GV+ YV++ G HPFD DDEE+ I+ +PD++ V P A L+R+M+S++ RPS +E L H+W Sbjct: 260 EVMLADFGSAFSKN--------HVTGSRDYTAAYSAPEVLLRSCAIDEKADIWSMGVLMYVLLSGRHPFDTHLHQDDEEVERRIVGKEPDYNAHAMRHVGPVAKDLLRRMMSKDRRQRPSAKEALSHAW 380
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A835ZCD7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.490e-21 Identity = 52/129 (40.31%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENIL-----YSDPDWDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWL 391 V L DFGS+FR+ G+G R YT YS PEVV + E SA DVW+LGV+AY+++ G HPFDP+ D + E+ ++ Y DP WD ++ A L++ L+++P RP+ ++L H W+ Sbjct: 159 VKLVDFGSAFRV---GTGPP--KRKEWSYTAVYSPPEVVAGTAEASAAGDVWALGVVAYILLLGVHPFDPSGDTCEAEVLRRVVSAEPDYDDPAWDLIDAGAKDLVQGALNKDPALRPTAAQLLAHPWV 282
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: D7FVW8_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW8_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 1.730e-20 Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 2 Query: 11 VGKVLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDH-SPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPDWDG---VEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQ 394 V +V LADFGS+FR + + ++YT AYSAPEV+ S + + D+W+LGV+ +V++ G HPF SD + E++ + +PD V P+A L+R++L+R+PEDRPS ++L H WL+ Sbjct: 255 VPEVRLADFGSAFRQY-------RQISSARDYTAAYSAPEVLSRQSVDDYRQVDMWALGVVMWVLLTGEHPFGAHSDLSEAELARRVAEMEPDLKALRHVSPEAKDLVRRLLARDPEDRPSALQLLSHPWLR 379
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A6H5KFB2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB2_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 2.720e-20 Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 2 Query: 11 VGKVLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDH-SPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPDWDG---VEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQ 394 V +V LADFGS+FR + + ++YT AYSAPEV+ S + + D+W+LGV+ +V++ G HPF SD + E++ + +PD V P+A L+R++L+R+PEDRPS ++L H WL+ Sbjct: 390 VPEVRLADFGSAFRQY-------RQISSARDYTAAYSAPEVLSRQSVDDYRQVDMWALGVVMWVLLTGEHPFGAHSDLSEAELARRVAEMEPDLKALRHVSPEAKDLVRRLLARDPEDRPSALQLLSHPWLR 514
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A3M6VSE3_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSE3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.220e-18 Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENILYSDPD-----WDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWL 391 + L DFG SF++ + T AY+ PE ++H E DVWSLGV+ Y+++ G HPFDP+ DA DEEI E IL + D W + A L+RQML+ +PE R S +VL+H W+ Sbjct: 222 LRLIDFGQSFQLD------HENGHKMNACTTAYAPPEFINHR-ETGCAMDVWSLGVVLYIVLCGLHPFDPSDDATDEEIQERILRGNFDQESIGWLCMSDSARNLVRQMLTVDPEKRISAAQVLEHKWI 343
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A7S1TZT2_9STRA (cGMP-dependent protein kinase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZT2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.120e-18 Identity = 58/148 (39.19%), Postives = 75/148 (50.68%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRTVKEY-------TVAYSAPEVVDHSPEISAK---ADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENIL-----YSDPDWDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQQLQ*AGGA 418 + L DFGS+ + GG G G TVAYSAPEV+ E++A+ ADVWSLGV+ Y++V G HPFD DD+ + NIL + D W V P L+ ++L NPE RP +L H WL AG A Sbjct: 193 IRLIDFGSAAKTEGGAEGSEGASAAAASVAARRGQGTVAYSAPEVL--RGEMAAQGDAADVWSLGVLLYILVSGAHPFDLDGTGDDDVVRRNILSGALAFDDDVWQRVSPSLIELLTRLLHPNPEARPCASALLAHPWLLSHGGAGAA 338
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A7S2XVS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVS7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 3.370e-18 Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENIL-----YSDPDWDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQ 394 + LADFGS+F + S + TVAYSAPEV+ A+ D+WSLGV+ ++++ G HPFDP A DE++ E +L + + DW P+A L++++L+ + + RP+ EVL+H W Q Sbjct: 238 IRLADFGSAFFL----SDLDDSPKNAPTGTVAYSAPEVLRGKVH-DARCDLWSLGVLLFIILTGVHPFDPDHTATDEKVKERVLKGELHFDEEDWREFSPQAKDLVKRLLTFDVDKRPTAEEVLEHPWFQ 362
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Match: A0A7S4A749_9STRA (cGMP-dependent protein kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A749_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.320e-17 Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 20 VLLADFGSSFRMRGGGSGGSGGMRT--VKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMVKGHHPFDPTSDADDEEISENIL--------YSDPDWDGVEPKAATLIRQMLSRNPEDRPSIREVLQHSWLQ 394 V L DFGS+ R G + +RT T AY+APEV+ A AD+WSLGVI Y+++ G HPFD +DADD E++ +L + W V A L++++L+ P DRP+ EVL H+WLQ Sbjct: 190 VRLVDFGSA-RFVGPSTENGEELRTRGAAGATPAYAAPEVL-RGDAFDASADLWSLGVILYLLLTGTHPFDARNDADDAEVTRRVLAGADAAGAFKGAAWARVPSAARPLVKRLLADRPSDRPAAAEVLAHAWLQ 322 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1428.3176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1428.3176.1 >prot_L-elsbetiae_contig1428.3176.1 ID=prot_L-elsbetiae_contig1428.3176.1|Name=mRNA_L-elsbetiae_contig1428.3176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp MRGGGSGGSGGMRTVKEYTVAYSAPEVVDHSPEISAKADVWSLGVIAYVMback to top mRNA from alignment at L-elsbetiae_contig1428:19931..21452- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1428.3176.1 ID=mRNA_L-elsbetiae_contig1428.3176.1|Name=mRNA_L-elsbetiae_contig1428.3176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1522bp|location=Sequence derived from alignment at L-elsbetiae_contig1428:19931..21452- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1428:19931..21452- >mRNA_L-elsbetiae_contig1428.3176.1 ID=mRNA_L-elsbetiae_contig1428.3176.1|Name=mRNA_L-elsbetiae_contig1428.3176.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig1428:19931..21452- (Laminarionema elsbetiae ELsaHSoW15)back to top |