mRNA_L-elsbetiae_contig14276.3173.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI) HSP 1 Score: 317 bits (811), Expect = 6.250e-103 Identity = 168/232 (72.41%), Postives = 171/232 (73.71%), Query Frame = 1 Query: 1 QKQVNFMLDAKQGDTICLGADGQGCGTVV-------------HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-------------------------------------------DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELSRMFDRRRQQQ 528 +KQ NFM DAKQGDTICLG DGQGCGTVV HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQK AVICACIIAAYRE+GTEEL+RMFD RRQQQ Sbjct: 99 KKQSNFMQDAKQGDTICLGTDGQGCGTVVQDHKARRRGGGGVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQQ 330
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA) HSP 1 Score: 233 bits (594), Expect = 5.290e-71 Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 1 Query: 7 QVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELSRMFDRRR 519 Q F+LDAKQGDTIC+G G GCG VV HEG+MYR+FEGE DRSHHG P++LYSTA+NMRT IS+G D+ RL NL+ VEM LS +GKD+++TR YKD+MK++AFD+I+H+A NCDLH TVT RAKELFAGWRNVKEHVH K+AVICACI+AAYR I +E RRR Sbjct: 59 QQFFVLDAKQGDTICMGVGGAGCGAVVEDHKAHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKGALDSARLANLSSYVEMNLSQMGKDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVKEHVHHKNAVICACIVAAYRTIAADEYRAREARRR 235
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.340e-58 Identity = 100/168 (59.52%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 489 +Q NF+ D +GDTIC G DG GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+ST+HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY G E Sbjct: 132 EQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGRE 299
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: W2RG83_PHYPN (C2H2-type domain-containing protein n=38 Tax=Peronosporaceae TaxID=4777 RepID=W2RG83_PHYPN) HSP 1 Score: 198 bits (503), Expect = 6.930e-58 Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 498 +Q NF+ D +GDTIC G DG GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY E E S Sbjct: 178 EQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 348
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL) HSP 1 Score: 197 bits (500), Expect = 9.720e-58 Identity = 99/168 (58.93%), Postives = 125/168 (74.40%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 489 +Q NF+ D +GDTIC G DG+GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+S++HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+++EHVHQ AV+ C+IAAY E E Sbjct: 140 EQNNFITDYARGDTICNGLDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKASRLIDHTISNLDLHEIVGNRAKKMFADFRDLREHVHQFEAVVAGCVIAAYMETAKE 307
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A1V9ZD07_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD07_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.140e-57 Identity = 99/171 (57.89%), Postives = 123/171 (71.93%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 498 +Q NF+ D +GDTIC GADG GCG VV HEG+ YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ + LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+++EHVHQ AV+ CII AY G E S Sbjct: 107 EQNNFITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKEMYS 277
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: K3X3Y0_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y0_GLOUD) HSP 1 Score: 196 bits (497), Expect = 3.550e-57 Identity = 98/168 (58.33%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 489 +Q NF+ D +GDTIC G DG GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IA+Y + G E Sbjct: 149 EQNNFITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIASYMDTGKE 316
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: T0QRB4_SAPDV (C2H2-type domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QRB4_SAPDV) HSP 1 Score: 194 bits (494), Expect = 5.230e-57 Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 489 +Q NF+ D +GDTIC G DG+GCG VV HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ + LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+++EHVHQ AV+ CII AY G E Sbjct: 115 EQNNFITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKE 282
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI) HSP 1 Score: 198 bits (503), Expect = 6.080e-57 Identity = 101/171 (59.06%), Postives = 124/171 (72.51%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 498 +Q NF+ D +GDTIC G DG GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY E E S Sbjct: 302 EQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 472
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A2D4C348_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C348_PYTIN) HSP 1 Score: 195 bits (495), Expect = 6.730e-57 Identity = 98/168 (58.33%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 4 KQVNFMLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 489 +Q NF+ D +GDTIC G DG+GCGTVV HEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A LR AE VEM LS +GKDER+TR YKD+MK++A LI+H N DLHE V RAK++FA +R+V+EHVHQ A++ C+IAAY + E Sbjct: 148 EQNNFITDYARGDTICNGIDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYMDTAKE 315 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14276.3173.1 >prot_L-elsbetiae_contig14276.3173.1 ID=prot_L-elsbetiae_contig14276.3173.1|Name=mRNA_L-elsbetiae_contig14276.3173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp MLDAKQGDTICLGADGQGCGTVVHEGSMYRKFEGEADRSHHGPAPNRLYSback to top mRNA from alignment at L-elsbetiae_contig14276:118..4166+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14276.3173.1 ID=mRNA_L-elsbetiae_contig14276.3173.1|Name=mRNA_L-elsbetiae_contig14276.3173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4049bp|location=Sequence derived from alignment at L-elsbetiae_contig14276:118..4166+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14276:118..4166+ >mRNA_L-elsbetiae_contig14276.3173.1 ID=mRNA_L-elsbetiae_contig14276.3173.1|Name=mRNA_L-elsbetiae_contig14276.3173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig14276:118..4166+ (Laminarionema elsbetiae ELsaHSoW15)back to top |