mRNA_L-elsbetiae_contig14251.3155.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI) HSP 1 Score: 338 bits (867), Expect = 7.110e-110 Identity = 173/199 (86.93%), Postives = 185/199 (92.96%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVHWAWH DGWASPYR ADEGAPLL+GCGAADFAGSGVVHMVGGVAALVAA+AVKPR+ RF +GR CRL QQSPALQTLGTLILWVGWYAFNAGSTI+ISGGRSVVAARAVVSTTIGPSAGVLVMV+ +K+LEKKFDTRGVNNGILSGLVAVT+GAPLVDPEGAFVIGV++A YY SANLLLKL+IDDVVDA V F Sbjct: 119 VVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGVAALVAAIAVKPRKSRFRHGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFFYYASANLLLKLKIDDVVDAAPVHMF 317
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE) HSP 1 Score: 336 bits (862), Expect = 1.090e-108 Identity = 171/199 (85.93%), Postives = 185/199 (92.96%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVHWAWH DGWASPYR ADEGAPLL+GCGAADFAGSGVVHMVGG+AALVAA+AVKPR+ RF +G CRL QQSPALQTLGTLILWVGWYAFNAGSTI+ISGGRSVVAARAVVSTTIGPSAGVLVMV+ +K+LEKKFDTRGVNNGILSGLVAVT+GAPLVDPEGAFV+GVV+A +YY SANLLLKL+IDDVVDA V F Sbjct: 170 VVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRFRHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVMGVVSAFLYYASANLLLKLKIDDVVDAAPVHMF 368
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A6V1QTK2_HETAK (Ammonium transporter n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QTK2_HETAK) HSP 1 Score: 202 bits (513), Expect = 1.020e-58 Identity = 113/199 (56.78%), Postives = 133/199 (66.83%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVHW W+A+GWAS +R D LL GCG DFAGSGVVH GGV AL A + PR GRF NG+ + SP QTLGTLILW GWY FN ST+ I GG S AARA+V++TI AG + V+L KL D NNGIL GLV++TA +VDPEGAFVIG++ V+YY SA LLL+LQIDDVV+A V F Sbjct: 169 VVHWGWNANGWASAWREED----LLFGCGVLDFAGSGVVHTTGGVVALWGAKILGPRTGRFINGQKQEFKEVSPIYQTLGTLILWFGWYGFNGASTLYI-GGYSAPAARAMVTSTISAGAGCISSVLLAKLHTGIIDPGAANNGILGGLVSITASCSVVDPEGAFVIGLIGGVIYYFSALLLLRLQIDDVVNASPVHMF 362
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE) HSP 1 Score: 199 bits (507), Expect = 2.440e-57 Identity = 114/205 (55.61%), Postives = 133/205 (64.88%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRAD------------EGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDA 726 VVHW W GWASP R D E LL GCGA DFAG+GVVHM GG+ ALVAA V PR RF NG R+ QQSPALQTLG LILWVGWY FN GS S+S GRS + A A+V+TTI +A VL + + LK+ KK D+ +NNGILSGLVA++A LV PEGAF+IG VA+ Y + L +IDDVV A Sbjct: 161 VVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRFRNGIPNRMPQQSPALQTLGVLILWVGWYGFNGGSVGSVSNGRSHLVAAAMVNTTISAAASVLSVGLWLKIAYKKVDSGHLNNGILSGLVAISASGSLVQPEGAFIIGAVASAFYMLGTEGLKWFRIDDVVQA 365
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: D7G3S7_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3S7_ECTSI) HSP 1 Score: 183 bits (464), Expect = 2.750e-51 Identity = 109/199 (54.77%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVHW W A GWAS +R + LL CG DFAGSGVVHM GG AALV AV + PR GRF +G L Q S QTLGTL LW+GWY FN ST++I G VAARA+V+TTI + V + D NNG+L GLVA+TAG +V PEGA VIG VA VY S+ LLLKLQIDDVVDA V F Sbjct: 167 VVHWGWSAGGWASAWRETE----LLMDCGVLDFAGSGVVHMTGGTAALVGAVLLGPRSGRFIDGIPVELPQLSFVYQTLGTLCLWMGWYGFNGVSTLAIVG-LGEVAARAMVNTTIAGGVACVTSVTVAYFRIGYVDITAANNGVLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMF 360
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: D7FR22_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR22_ECTSI) HSP 1 Score: 182 bits (461), Expect = 4.230e-51 Identity = 107/200 (53.50%), Postives = 131/200 (65.50%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFY-NGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVHW W A GWAS +R D LL GCG DFAGSGVVHM GG+AAL AA+ V PR GRF +G L QQS LQ+LGTLILW GWY FN ST+ I G V AA+ +V+TTI + G + V+L K +D NNG+L+GLV VTAG +PEGA VIG+++ VY S+ +L+ L+IDDVVDA+ V F Sbjct: 166 VVHWGW-AGGWASAWRETD----LLFGCGVIDFAGSGVVHMTGGLAALCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIVGFAGV-AAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCSTCEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCF 359
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI) HSP 1 Score: 179 bits (454), Expect = 3.390e-50 Identity = 100/194 (51.55%), Postives = 129/194 (66.49%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRF-YNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDA 726 V HW W GWAS +R + LL GCG ADF+GSGVVH+ GG+ ALVAA V PR GRF G+ RL +QSPAL LGTLILW GW+ FNA S S + AA+++++T + PSA V+V +++ + + FD NG+L GLVA+TA +PLV EGAFVIGVV+ + + + LLLK +IDDVVDA Sbjct: 120 VAHWVWARSGWASSFRADGD---LLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSR-QPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGALVFYGSKLLLKFKIDDVVDA 309
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A835YJG4_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJG4_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.090e-49 Identity = 99/194 (51.03%), Postives = 124/194 (63.92%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFYNGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISI-SGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDA 726 VV+WAW DGWASPY A + LL+ CG D AGSGVVH+ G+AALV A + R GRF G + + S QTLGTLILW GW+ SGG S+VAARA+V+ I L V+L +LL+ NNGILSGLVA+ AGA +V+PEGAFVIG +AA+ Y+ A LL+K+Q+DDVV+A Sbjct: 162 VVYWAWSMDGWASPYLSASD--DLLSNCGVIDHAGSGVVHVSAGMAALVGAAMLGSRHGRFIEGIAREMPKASWVYQTLGTLILWFGWFGMVGSIGFGYTSGGDSLVAARAMVNAAIAAGTSCLTCVILSQLLDTVLSMEAANNGILSGLVAIAAGAAVVEPEGAFVIGFIAALCYFFGARLLVKIQVDDVVNA 353
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A835ZB85_9STRA (Ammonium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB85_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.600e-47 Identity = 98/200 (49.00%), Postives = 131/200 (65.50%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFY-NGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 VVH W++ GW S +R+ LL+ CG DFAGSGVVHM GGVAALV AV V PR GRF NG V L Q S Q +GTL LW GWY FN S++ I G + +VAA+ ++++T+ + G L ++ ++L+ D NNGILSG VA+TAG+ + PEGA +IG +A ++Y ++ LLLKL+IDDVV+A V F Sbjct: 174 VVHMTWNSGGWMSAFRQDH----LLSRCGVVDFAGSGVVHMTGGVAALVGAVMVGPRFGRFGPNGEVRALPQLSWVYQAIGTLFLWFGWYGFNGVSSLYIVG-KGLVAAKTMINSTLSGAIGGLSSTLVAQVLDGFIDPAAANNGILSGFVAITAGSGVAQPEGAILIGFIAGIIYQATSKLLLKLRIDDVVNAAPVHLF 368
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Match: A0A7S4DGA7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA7_HETAK) HSP 1 Score: 168 bits (425), Expect = 2.150e-46 Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 148 VVHWAWHADGWASPYRRADEGAPLLAGCGAADFAGSGVVHMVGGVAALVAAVAVKPRRGRFY-NGRVCRLAQQSPALQTLGTLILWVGWYAFNAGSTISISGGRSVVAARAVVSTTIGPSAGVLVMVVLLKLLEKKFDTRGVNNGILSGLVAVTAGAPLVDPEGAFVIGVVAAVVYYISANLLLKLQIDDVVDAVRVFPF 744 +VHW W A GWAS +R D+ LL GCG DFAGSGV+H GGVAAL+ A + PR+GRF G VC + Q S QTLGTL LW N S++ +GG S+ ARA+V+TTI AG + +++ + + D NNG+L GLVA+TAG +PEGAFV G++A +Y ++ L+LKL+IDDVVDA V F Sbjct: 81 IVHWGWSAGGWASAWRE-DK---LLLGCGIIDFAGSGVIHTTGGVAALLGAYMIGPRKGRFSATGEVCEIPQLSWVYQTLGTLFLWFXXXXXNGVSSMYAAGG-SLAGARAMVNTTISGGAGCISGLIVARFVHGYIDPASANNGLLGGLVAITAGCGTSNPEGAFVTGLIAGAIYVGASVLMLKLRIDDVVDAAPVHLF 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14251.3155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14251.3155.1 >prot_L-elsbetiae_contig14251.3155.1 ID=prot_L-elsbetiae_contig14251.3155.1|Name=mRNA_L-elsbetiae_contig14251.3155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp SPLHNRQWHKRRREAKALPNTHHTTTATATATATAKHTPGDMLMLYATQVback to top mRNA from alignment at L-elsbetiae_contig14251:92..3888- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14251.3155.1 ID=mRNA_L-elsbetiae_contig14251.3155.1|Name=mRNA_L-elsbetiae_contig14251.3155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3797bp|location=Sequence derived from alignment at L-elsbetiae_contig14251:92..3888- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14251:92..3888- >mRNA_L-elsbetiae_contig14251.3155.1 ID=mRNA_L-elsbetiae_contig14251.3155.1|Name=mRNA_L-elsbetiae_contig14251.3155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig14251:92..3888- (Laminarionema elsbetiae ELsaHSoW15)back to top |