mRNA_L-elsbetiae_contig14242.3149.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A6H5JCP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP2_9PHAE) HSP 1 Score: 257 bits (657), Expect = 2.890e-82 Identity = 125/152 (82.24%), Postives = 135/152 (88.82%), Query Frame = 1 Query: 1 QVEYVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLPLMV 456 QVEYVTIC+VTAV+TFV WP+L +VSVLSHMGTG+DGWLSQAIDT+GLASFAVA TQ+GIRR HPG TIVICCITCSGGGILRDVLTSSPVM LS+H QMYVST A GS AYL ARR S+DPL RIC GFFTV+ILR LACLYDLRLP MV Sbjct: 279 QVEYVTICVVTAVVTFVLWPVLSRVSVLSHMGTGLDGWLSQAIDTVGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAIGSGAYLLARRYSKDPLFRICVGFFTVIILRLLACLYDLRLPRMV 430
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: D8LLZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ7_ECTSI) HSP 1 Score: 173 bits (439), Expect = 3.880e-52 Identity = 85/103 (82.52%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 112 WLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRAL 420 WL +AIDTIGLASFAVA TQ+GIRR HPG TIVICCITCSGGGILRDVLTSSPVM LS+H QMYVST AFGS AYL ARR S+DPL R+CAGFFTVVILR L Sbjct: 43 WLVEAIDTIGLASFAVAATQNGIRRKCHPGTTIVICCITCSGGGILRDVLTSSPVMALSSHAQMYVSTAAFGSGAYLLARRYSKDPLFRVCAGFFTVVILRLL 145
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A835ZGC7_9STRA (UPF0126 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC7_9STRA) HSP 1 Score: 156 bits (395), Expect = 9.980e-45 Identity = 78/149 (52.35%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 1 QVEYVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 +VEY+ +CIVT++ TF WP LR + +LS G+ DG L + +DTIGL +FAV GTQHGIRR HP T+VI ITCS GG+ RDV+T +P+ V+ +H ++Y +T A GS AYL AR DPL R+ AGF V R A DLRLP Sbjct: 117 EVEYLAMCIVTSIATFYAWPHLRHMPILSASGSSDDGALPRWLDTIGLGAFAVVGTQHGIRRRLHPLATVVIATITCSFGGVTRDVMTKAPIRVMHSHAELYATTAAAGSCAYLIARAAVADPLLRMAAGFGVTVAARFAAWTLDLRLP 265
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A5J4Z897_PORPP (UPF0126 membrane protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z897_PORPP) HSP 1 Score: 101 bits (251), Expect = 1.400e-22 Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 7 EYVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 EY+ I + T+++ F FWP V +G D + ID+ L +F+ GT +GIR G +P I +V +TC+ GG++RD PV VL ++ ++Y +T A GS AY+ AR + RI G + I+R A Y RLP Sbjct: 196 EYIAIAVATSLLAFFFWP-----DVSDALGITEDEYFINVIDSWSLGAFSCIGTMNGIRAGYNPLIVLVCAVVTCTFGGVVRDTFLKRPVRVLHSYAEIYATTAAVGSIAYMAARAMQLPLVLRISLGLSSTFIMRLWAMKYGTRLP 337
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A0S4JKV7_BODSA (Uncharacterized protein n=2 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JKV7_BODSA) HSP 1 Score: 89.0 bits (219), Expect = 9.060e-19 Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 130 DTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLR 441 DT+G+ +FAV GT + +R G IT+V CCITC+GGG++RD L PV V+ ++Y G AAYL AR R+ G T + LR LA Y+++ Sbjct: 125 DTLGIGAFAVIGTMYAVRMGFGIIITLVCCCITCTGGGVIRDTLVKRPVRVMHNLEEVYAEAAVSGGAAYLLARGAGLPLQVRVLVGAGTTIALRILATKYNIK 228
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A2D5PAN2_9GAMM (Uncharacterized protein n=3 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A2D5PAN2_9GAMM) HSP 1 Score: 78.2 bits (191), Expect = 6.060e-15 Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 10 YVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAI---DTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 +++IC++ + +T+ P+L LS+A+ D +GLA FAVAGT+ ++ GA P I + + +T S GGI RDVL S + +++ ++Y++T GS YL + GF T ILRALA + ++LP Sbjct: 70 WISICLIASAVTYFVTPMLAS--------------LSRALVWMDAVGLALFAVAGTEVALKFGATPLIAVCMGVMTASFGGIARDVLCRSSLTLMNE--ELYITTALAGSVVYLILHELGLAANVDLIGGFCTAFILRALAIKFKIKLP 202
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A099K9X1_COLPS (Uncharacterized protein n=5 Tax=Colwellia TaxID=28228 RepID=A0A099K9X1_COLPS) HSP 1 Score: 77.4 bits (189), Expect = 1.230e-14 Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 10 YVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 ++ IC+V+ IT+ P L + T W+ D +G+A FAV GT+ + G P I I + +T S GGI RDVL+ S + +++ ++Y++TT GS YL+ S P + GF ILRALA + ++LP Sbjct: 70 WIIICLVSTAITYFIAPKLVSI-------TRALIWM----DAVGIALFAVVGTEIALEFGTSPLIAICMGVMTASFGGIARDVLSGSNLTLMNE--ELYITTTLAGSVMYLWLNTLSLPPNYDLIGGFCIAFILRALAISFHIKLP 202
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A2M7ZJK7_9BACT (Uncharacterized protein n=1 Tax=Ignavibacteriales bacterium CG_4_9_14_3_um_filter_30_11 TaxID=1974043 RepID=A0A2M7ZJK7_9BACT) HSP 1 Score: 73.9 bits (180), Expect = 2.690e-13 Identity = 43/106 (40.57%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 130 DTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 D IGLA F + GTQ G HP + I++ IT + GG+LRDVL++ ++L + Y + GS YL A L G TVVILRALA ++ +RLP Sbjct: 100 DAIGLAFFTITGTQIAESAGLHPILIIIMGTITGTAGGVLRDVLSAEIPLILKRDI--YATAAISGSIVYLLAEFVDIPNLYSALLGIITVVILRALAIIWGIRLP 203
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: K8EPI8_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPI8_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 6.290e-13 Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 7 EYVTICIVTAVITFVFWP--ILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAY 339 EY+ + +V + TF FWP + ++V M T ++ WL D + L F + G + R P + + + ITC+GGG++RDV PV VL +H ++Y +T G+A Y Sbjct: 270 EYLIVALVASFFTFFFWPKVLSKEVRESKAMETALN-WL----DALSLGGFCIIGANAALVRNLGPLLAVALSAITCTGGGVVRDVFLRQPVRVLHSHAELYGTTAIAGAAVY 377
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Match: A0A430KNK3_9GAMM (Trimeric intracellular cation channel family protein n=2 Tax=Amphritea TaxID=515417 RepID=A0A430KNK3_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 2.620e-12 Identity = 44/147 (29.93%), Postives = 74/147 (50.34%), Query Frame = 1 Query: 10 YVTICIVTAVITFVFWP-ILRKVSVLSHMGTGMDGWLSQAIDTIGLASFAVAGTQHGIRRGAHPGITIVICCITCSGGGILRDVLTSSPVMVLSAHVQMYVSTTAFGSAAYLYARRRSRDPLTRICAGFFTVVILRALACLYDLRLP 447 ++ +C++ + IT+ P ++ + L M D +G+A FAV GT+ G+ G P I + + +T S GGI RD+L S + +++ ++Y++T GS YL + GF ILRALA ++ L+LP Sbjct: 70 WIIVCLIASAITYFIAPKLVSRTRALIWM------------DAVGIALFAVVGTEIGLNFGTSPLIAVCMGVMTASFGGIARDLLCGSNLTLMNE--ELYITTMLAGSVTYLILHELHLPDNYDLIGGFLVAFILRALAIIFKLKLP 202 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14242.3149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14242.3149.1 >prot_L-elsbetiae_contig14242.3149.1 ID=prot_L-elsbetiae_contig14242.3149.1|Name=mRNA_L-elsbetiae_contig14242.3149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp QVEYVTICIVTAVITFVFWPILRKVSVLSHMGTGMDGWLSQAIDTIGLASback to top mRNA from alignment at L-elsbetiae_contig14242:3360..4379- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14242.3149.1 ID=mRNA_L-elsbetiae_contig14242.3149.1|Name=mRNA_L-elsbetiae_contig14242.3149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig14242:3360..4379- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14242:3360..4379- >mRNA_L-elsbetiae_contig14242.3149.1 ID=mRNA_L-elsbetiae_contig14242.3149.1|Name=mRNA_L-elsbetiae_contig14242.3149.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=918bp|location=Sequence derived from alignment at L-elsbetiae_contig14242:3360..4379- (Laminarionema elsbetiae ELsaHSoW15)back to top |