mRNA_L-elsbetiae_contig14240.3147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI) HSP 1 Score: 204 bits (519), Expect = 9.420e-59 Identity = 102/110 (92.73%), Postives = 106/110 (96.36%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 VRLVADE G FGHPL+RESSVLALSKFMCISEAFC+RNLSLLFTTLERS DTAVRANIIVALGDLAFRFPNALEPWNP IY+RLKDD+PGVRANAIMVLTHLILNDMVKV Sbjct: 1064 VRLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERSNDTAVRANIIVALGDLAFRFPNALEPWNPHIYNRLKDDSPGVRANAIMVLTHLILNDMVKV 1173
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A7S3MAC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAC1_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.040e-40 Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 1 Query: 7 LVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +VA+E +F HPLLRE+S+LAL ++MC S CD+ L LLFT LER VR ++++ALGDLAFRFPN++EPW P +Y RL+D++ VR N +MV+THL+LNDM+KV Sbjct: 4 MVANEQKKFSHPLLRETSILALCRYMCTSSVVCDQLLPLLFTVLERESAVTVRTSVMIALGDLAFRFPNSIEPWTPRMYARLRDESVVVRYNTLMVITHLVLNDMIKV 111
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A3R7WGF1_9STRA (Cnd1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WGF1_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.360e-38 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +RLVA+E+G F L++E+S +AL KFMCIS FC++NL L+FT L+ + +VR+NI+VALGDL+FRFPN +EPW IY RL+D N VR N IMVLTHLILNDMVKV Sbjct: 23 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 132
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A1V9YJJ7_9STRA (Condensin complex subunit (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJJ7_9STRA) HSP 1 Score: 142 bits (358), Expect = 4.660e-37 Identity = 67/110 (60.91%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 VR+VA+E+G F +++E++++AL KFMCIS FC++NL L+FT L+ S+ +VR NI+VALGDL+FRFPN +EPW IY RL+D N VR N IMVLTHLILNDMVKV Sbjct: 1131 VRMVANEDGVFDDEMVKETAIVALCKFMCISATFCEKNLPLIFTRLKESEQPSVRCNIVVALGDLSFRFPNLIEPWTSHIYARLRDINTNVRKNTIMVLTHLILNDMVKV 1240
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A1V9YNA9_9STRA (Condensin complex subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNA9_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.350e-37 Identity = 68/110 (61.82%), Postives = 87/110 (79.09%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 VRLVA+E+G F ++RE++++AL KFMCIS FC++NL L+FT L+ S+ +VR NI+VALGDL+FRFPN +EPW IY RL+D + VR N IMVLTHLILNDMVKV Sbjct: 919 VRLVANEDGAFDDEMIRETAIVALCKFMCISSDFCEKNLPLVFTKLKESEQPSVRCNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDTDVRKNTIMVLTHLILNDMVKV 1028
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A397DUM4_9STRA (Cnd1 domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DUM4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.170e-36 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +RLVA+E+G F L++E+S +AL KFMCIS FC++NL L+FT L+ + +VR+NI+VALGDL+FRFPN +EPW IY RL+D N VR N IMVLTHLILNDMVKV Sbjct: 663 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 772
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A3R6ZLG0_9STRA (Cnd1 domain-containing protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZLG0_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.170e-36 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +RLVA+E+G F L++E+S +AL KFMCIS FC++NL L+FT L+ + +VR+NI+VALGDL+FRFPN +EPW IY RL+D N VR N IMVLTHLILNDMVKV Sbjct: 717 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 826
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A836CLB4_9STRA (Non-SMC mitotic condensation complex subunit 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB4_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.210e-36 Identity = 71/115 (61.74%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 4 RLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTA------VRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 R+VA+E+G FGHPLLRES+VLAL+K+MC+S A C+R L LLFT L + A +R+ I+VALGDLAFRFPNALEPW +Y L+D P VR +A++VLTHLILNDMVKV Sbjct: 1136 RIVANEDGAFGHPLLRESAVLALAKYMCVSAAACERYLPLLFTALAAAAPAAAARGAQLRSTIVVALGDLAFRFPNALEPWGARMYACLRDSAPRVRGDALLVLTHLILNDMVKV 1250
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A024UUV2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUV2_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.090e-36 Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +RLVA+++G F L++E++ +AL KFMCIS FC++NL L+FT L+ + +VR+NI+VALGDL+FRFPN +EPW IY RL+D N VR N IMVLTHLILNDMVKV Sbjct: 894 IRLVANDDGTFDDELIKETATVALCKFMCISAEFCEKNLPLIFTRLKECEQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDVNVNVRKNTIMVLTHLILNDMVKV 1003
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A6G0XYQ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYQ8_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.090e-36 Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1 Query: 1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 330 +RLVA+E G F L++E+S +AL KFMCIS FCD+NL L+FT L+ + +VR+NI+VALGDL+FRFPN +EPW IY RL+D + VR N IMVLTHLILNDMVKV Sbjct: 897 IRLVANEEGIFDDDLIKEASTVALCKFMCISGDFCDKNLPLIFTKLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDVNVRKNTIMVLTHLILNDMVKV 1006 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14240.3147.1 >prot_L-elsbetiae_contig14240.3147.1 ID=prot_L-elsbetiae_contig14240.3147.1|Name=mRNA_L-elsbetiae_contig14240.3147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKback to top mRNA from alignment at L-elsbetiae_contig14240:323..1503+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14240.3147.1 ID=mRNA_L-elsbetiae_contig14240.3147.1|Name=mRNA_L-elsbetiae_contig14240.3147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1181bp|location=Sequence derived from alignment at L-elsbetiae_contig14240:323..1503+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14240:323..1503+ >mRNA_L-elsbetiae_contig14240.3147.1 ID=mRNA_L-elsbetiae_contig14240.3147.1|Name=mRNA_L-elsbetiae_contig14240.3147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig14240:323..1503+ (Laminarionema elsbetiae ELsaHSoW15)back to top |