mRNA_L-elsbetiae_contig1420.3125.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1420.3125.1
Unique NamemRNA_L-elsbetiae_contig1420.3125.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: D7G8E8_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E8_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 2.810e-124
Identity = 223/384 (58.07%), Postives = 239/384 (62.24%), Query Frame = 1
Query:    1 VRLEGRQWGSTGSKKPRVGVYSIPGEKVHDPSWKNQDAGLAIAPIGQGEAQALFAIFDGHGVNGRQASSECMERLPKYLLSAS-RSGSLPSALRRSCQRLHRDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDTTPD---------VAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGGSRGR----------------------------------LVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1020
            VRLEGR W S GS +P VG+YSI GEK HDP WKNQDAGL IAP  + E QALFAIFDGHG NG QAS ECMERLPK+L SAS +SGS  SALRRSCQRLH DLATGVAGDC RSGTTLCAAVL GRRLTVANVGDSGCLRLSR T +               + GK   AS                  +   P    +AGG+                                     LV +RLSRDHKPES GELERI+AAGGIVFPLPR  +     GG                G +    T AR   AGI RVW A GDGPGLAMSRSIGDKMAHSVGVTYEPEI+EFDLD RSDVMLV ASDGVWDV+SAEDIRKV
Sbjct:    2 VRLEGR-WASAGSTEPNVGIYSIAGEKAHDPLWKNQDAGLVIAPFDRREGQALFAIFDGHGKNGGQASRECMERLPKHLASASSQSGSPASALRRSCQRLHHDLATGVAGDCGRSGTTLCAAVLAGRRLTVANVGDSGCLRLSRSTAAASXXXXXXXXXXXXXIPGKAALAS------------------DRGTPDVVDKAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVTERLSRDHKPESKGELERIRAAGGIVFPLPRSGS-----GGXXXXXXXXXXXXXXXEGSKKGLKTAARGIAAGIPRVWTASGDGPGLAMSRSIGDKMAHSVGVTYEPEITEFDLDKRSDVMLVFASDGVWDVLSAEDIRKV 361          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A1R2BZE2_9CILI (PPM-type phosphatase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BZE2_9CILI)

HSP 1 Score: 104 bits (259), Expect = 2.050e-21
Identity = 91/289 (31.49%), Postives = 121/289 (41.87%), Query Frame = 1
Query:  157 LFAIFDGHGVNGRQASSECMERLPKYLLSASRSGSLP-SALRRSCQRLHRDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDTTPDVAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGGSRGRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1020
            +FA+ DGHGVNG   S     R P  LLS     S P  AL  SC RL++++      D   SG+T  + ++ G++L  ANVGDS  L   + T    T                                          G+    +A  LSRDHKP    E ERI  AGG V                 D N  P                       G +RVW    + PGLAMSRS GDK+A SVGV   PEI EF+++   D  +V+ SDG+++ ++ ED+ K+
Sbjct:  159 IFAVADGHGVNGEHVSGYIKNRFPLILLSNPYFLSAPIRALTASCIRLNKEI-NSQDFDTNFSGSTFVSIIIRGKKLWCANVGDSRALLGRQLTDKTGTK-----------------------------------------GNCNHWMAIALSRDHKPNENDESERIYKAGGRVEAYQ-------------DENGNPF----------------------GPSRVWLKSQNLPGLAMSRSFGDKVASSVGVICHPEILEFEIN-NDDKFIVIGSDGIFEFLTNEDVVKI 369          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A4D9D7H3_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7H3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.030e-19
Identity = 109/329 (33.13%), Postives = 137/329 (41.64%), Query Frame = 1
Query:  100 KNQDAGLAIAPIGQGEAQALFAIFDGHGVNGRQASSECMERLPKYLLSASRSGSLPS-ALRRSCQRLHRDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDTTPDVAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGG----SRGRLVAQ----------------RLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMS-AEDIRKV 1020
            KNQDA L +A      +   F + DGHG  G   S      + + L +       P  A+      L   L      D   SGTTL A +L G R+ V NVGDS      R T +    P+ A          A+   T+R   M   +  L  T  +A G    SR  L                   RLS DHKP+   E  RI AA G VF +   D         +D                            G ARVW    D PGLAMSRS+GD +AH+VGV+ EPE+ E+ LD   DV LVLA+DG+W+ MS AE +R V
Sbjct:  137 KNQDA-LIMAEEPH-TSTLFFCVLDGHGEFGELVSGFFQREMARNLFAHDHFEQDPRRAVIEVVAALESALVQDRRIDTAFSGTTLTAVLLRGDRVLVFNVGDS------RVTVALHDAPNTAD---------ASVSSTSRESSMPMKKETLACTPSKARGLSFLSRRSLSLSAASNSPSPPTPPLRSIRLSIDHKPDVAAEKARILAANGRVFAVRYDDG--------VD----------------------------GPARVWLKDLDVPGLAMSRSLGDVVAHTVGVSSEPEVFEYTLDSARDVFLVLATDGLWEFMSDAEVVRMV 412          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A2R5GV65_9STRA (Protein phosphatase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV65_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.390e-19
Identity = 91/314 (28.98%), Postives = 126/314 (40.13%), Query Frame = 1
Query:   85 HDPSWKNQDAG-LAIAPI-GQGEAQALFAIFDGHGVNGRQASSECMERLPKYLLSASRSGS---LPSALRRSCQRLHRDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDTTPDVAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGGSRGRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDI 1011
            ++P  +NQD+  +   P+ G    + L  +FDGHG NG   S     RL   L SA +        S L  +   +  +L      D   SGTT    +L G  L VAN+GDS   R+++     D                                 V P  G      RGR+ A+ LS DHKP+   E  RI  AGG VF +   D         ID                            G ARVW +  D PGLAMSRS+ D +    GV    E+   +L P  D  +VLA+DG+W+ M+++++
Sbjct:  365 YNPDKQNQDSVVMQQLPVNGYCNGELLLCVFDGHGENGHHVSRRFAARLSTVLSSAPKFAQDEFTGSVLADALITIENELIQDRTIDTTLSGTTAVVTILRGSTLFVANIGDS---RIAKGVYKKDKN------------------------------GVYPQPG------RGRIYAENLSEDHKPDLERERNRIVKAGGRVFAMKYDDG--------ID----------------------------GPARVWLSYADMPGLAMSRSLCDTIGKEAGVVSHAELFAHELQPGRDKFIVLATDGLWEFMTSQEV 603          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A1R2BX74_9CILI (PPM-type phosphatase domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BX74_9CILI)

HSP 1 Score: 97.4 bits (241), Expect = 5.770e-19
Identity = 90/294 (30.61%), Postives = 122/294 (41.50%), Query Frame = 1
Query:  157 LFAIFDGHGVNGRQASSECMERLP------KYLLSASRSGSLPSALRRSCQRLHRDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDTTPDVAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGGSRGRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1020
            LFA+ DGHG+NG   S    +R P       Y LS+     + SA + + +   +D  T        SG+T  + ++ G++L  ANVGDS  L L R+ P    T                                         GS    ++  LSRDHKP    E  RI A GG V      +A    DG                                G +RVW    + PGLAMSRS GDK+A +VGV  EPEI EF+L+   D  +V+ SDGV++ +S ED+ K+
Sbjct:  159 LFAVADGHGINGEYVSGYIKDRYPIILSANPYFLSSPSRAIVASAAKLNKEIRAKDFDTNF------SGSTFVSVMMRGKKLWCANVGDSRAL-LGRQLPEKTGTK----------------------------------------GSCNHWMSIALSRDHKPNECDESARILAKGGRV------EAYQDEDGNPF-----------------------------GPSRVWLKNQNIPGLAMSRSFGDKVASTVGVISEPEILEFELN-CDDKFVVIGSDGVFEFLSNEDVVKL 369          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: D8TIG5_VOLCA (Protein-serine/threonine phosphatase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIG5_VOLCA)

HSP 1 Score: 96.3 bits (238), Expect = 2.480e-18
Identity = 120/388 (30.93%), Postives = 155/388 (39.95%), Query Frame = 1
Query:   52 VGVYSIPGEKVHDPSWK--NQDAGLAIAPIGQGEAQALFAIFDGHGVNGRQASSECMERLPKYLLS-----------------------------ASRS-------------------------GSLPSALRRSCQRLHRDLA-TGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCL-----RLSRRTPSPDTTPDVAGKPNAASGDPAAAG-GTARRRG--MGAAEHVLPGTGGRAGGSRGRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1020
            V   S+PG   + P +K  NQD+ L +        Q L A+FDGHG  G + S+     LP  LL+                             AS S                         G LP A+ R+   L R L  +G+  D + SGTT     ++GRR+T A VGDS  L     R      +  +   VA     A  DPAA G G A   G  +G +      T GRA G  G       S DHKPE   EL+RIQAAGG V        + GR G        PV                      G  RVW      PGLAMSR++GD     +GVT +P  +   L      +LV+ASDGVW++MS E + ++
Sbjct:  119 VAGVSLPG---YAPGYKDRNQDSALLLDTF-LSNRQQLLAVFDGHGPEGDRVSAFVKRNLPYTLLTQLAEDGEETRRRGAAAVDSSEESRAAKMAASASPWTFVTSPQPTACSGGGRPAGGCGGGPLPRAMWRAVTSLDRQLEDSGI--DVVNSGTTAALCHVHGRRVTAAWVGDSRMLLGLPMRAGEAAGAHASVAAVALLSETA--DPAAGGSGAANNIGNEVGVSGAATTATRGRARGGDGSWRVAWSSSDHKPELPEELQRIQAAGGRVA------RSVGRQG--------PV----------------------GPYRVWFQDQAYPGLAMSRALGDLPGREIGVTCQPSCASLRLPDSGPAVLVVASDGVWELMSNEKVLEL 462          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A835YZ58_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ58_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.870e-18
Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  607 LSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQAT---GIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRK 1017
            L+ DHKP    E +RI A+GG+V P P R A     GG       P+AG   A    G R   L +         RVW   GDGPGLAMSRS+GD +AH +GVT+EPE+ +  L    D +LV+ SDG+WD++  E++ +
Sbjct:  386 LTADHKPNVDSERQRILASGGLVGPTPER-AVMNCQGGA------PLAGAAAAAAEGGARRGRLPS---------RVWMPAGDGPGLAMSRSLGDLVAHQIGVTHEPEVCQRVLS-AGDRVLVVGSDGIWDMLPNEEVTE 508          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A835ZAZ3_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ3_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.120e-18
Identity = 62/142 (43.66%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  586 GRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRS-DVMLVLASDGVWDVMSAED 1008
            G LVA+ LS DHKP++  E ERI AAGG VF +   D   G DG       PP                          RVW    D PGLAMSRS+GDK+AH+ GV+ EPE    +LDP + DV+L+LA+DG+W+ MS E+
Sbjct:  226 GALVAEPLSVDHKPDAEAERERILAAGGRVFAVEYED---GLDG-------PP--------------------------RVWLGHMDVPGLAMSRSLGDKVAHTAGVSSEPEFFTRELDPSAGDVLLILATDGLWEFMSNEE 331          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A448YZW7_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZW7_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.340e-17
Identity = 57/141 (40.43%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  586 GRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAED 1008
            G++V   ++ DHKP++  E ERI A+GG VF +   D   G DG       PP                          RVW    D PGLAMSRS+GD +AHS GV  EPE +EFDLDP +D  LV+A+DG+W+ ++ E+
Sbjct:  230 GKIVPVEITHDHKPDTPKEKERILASGGRVFAVEYDD---GIDG-------PP--------------------------RVWLGHMDVPGLAMSRSLGDVVAHSAGVISEPEFTEFDLDPEADKFLVIATDGLWEFITNEE 334          
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Match: A0A7S2A7W6_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7W6_TRICV)

HSP 1 Score: 92.4 bits (228), Expect = 2.270e-17
Identity = 58/141 (41.13%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  586 GRLVAQRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVAGRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAED 1008
            G+LVA+  + DHKP+S  E ERI AAGG VF +   D   G DG       PP                          RVW    D PGLAMSRS+GD +AH+ GV  EPE +E DLDP +D  +V+A+DG+W+ +  E+
Sbjct:  222 GKLVAEEFTHDHKPDSPKEKERILAAGGRVFAVEYDD---GIDG-------PP--------------------------RVWLGHMDVPGLAMSRSLGDAVAHTAGVISEPEFTERDLDPATDKFVVVATDGLWEFVGNEE 326          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1420.3125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8E8_ECTSI2.810e-12458.07PPM-type phosphatase domain-containing protein n=1... [more]
A0A1R2BZE2_9CILI2.050e-2131.49PPM-type phosphatase domain-containing protein n=1... [more]
A0A4D9D7H3_9STRA3.030e-1933.13PPM-type phosphatase domain-containing protein n=2... [more]
A0A2R5GV65_9STRA5.390e-1928.98Protein phosphatase, putative n=1 Tax=Hondaea ferm... [more]
A0A1R2BX74_9CILI5.770e-1930.61PPM-type phosphatase domain-containing protein n=2... [more]
D8TIG5_VOLCA2.480e-1830.93Protein-serine/threonine phosphatase n=1 Tax=Volvo... [more]
A0A835YZ58_9STRA3.870e-1842.14Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A835ZAZ3_9STRA5.120e-1843.66Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A448YZW7_9STRA1.340e-1740.43PPM-type phosphatase domain-containing protein n=1... [more]
A0A7S2A7W6_TRICV2.270e-1741.13Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1420contigL-elsbetiae_contig1420:2675..5249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue1.3e-100
Seed eggNOG ortholog2880.D7G8E8
KEGG koko:K04403,ko:K14803,ko:K17500
KEGG Pathwayko04010,ko04064,ko04380,ko04620,ko04621,ko04668,ko05140,ko05145,ko05168,ko05169,map04010,map04064,map04380,map04620,map04621,map04668,map05140,map05145,map05168,map05169
KEGG ModuleM00686
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03009
Ec32 ortholog descriptionProtein phosphatase 2C (PP2C)-like domain
Ec32 orthologEc-14_002780.1
Exons5
Model size1020
Cds size1020
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1420.3125.1prot_L-elsbetiae_contig1420.3125.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1420 2675..5249 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815566.084105-CDS-L-elsbetiae_contig1420:2674..28091622815566.084105-CDS-L-elsbetiae_contig1420:2674..2809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 2675..2809 -
1691682963.2502701-CDS-L-elsbetiae_contig1420:2674..28091691682963.2502701-CDS-L-elsbetiae_contig1420:2674..2809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 2675..2809 -
1622815566.097349-CDS-L-elsbetiae_contig1420:3097..37041622815566.097349-CDS-L-elsbetiae_contig1420:3097..3704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 3098..3704 -
1691682963.2681673-CDS-L-elsbetiae_contig1420:3097..37041691682963.2681673-CDS-L-elsbetiae_contig1420:3097..3704Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 3098..3704 -
1622815566.1076536-CDS-L-elsbetiae_contig1420:4127..42301622815566.1076536-CDS-L-elsbetiae_contig1420:4127..4230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 4128..4230 -
1691682963.276334-CDS-L-elsbetiae_contig1420:4127..42301691682963.276334-CDS-L-elsbetiae_contig1420:4127..4230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 4128..4230 -
1622815566.1170094-CDS-L-elsbetiae_contig1420:4505..45991622815566.1170094-CDS-L-elsbetiae_contig1420:4505..4599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 4506..4599 -
1691682963.2847362-CDS-L-elsbetiae_contig1420:4505..45991691682963.2847362-CDS-L-elsbetiae_contig1420:4505..4599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 4506..4599 -
1622815566.1265488-CDS-L-elsbetiae_contig1420:5168..52491622815566.1265488-CDS-L-elsbetiae_contig1420:5168..5249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 5169..5249 -
1691682963.2944653-CDS-L-elsbetiae_contig1420:5168..52491691682963.2944653-CDS-L-elsbetiae_contig1420:5168..5249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1420 5169..5249 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1420.3125.1

>prot_L-elsbetiae_contig1420.3125.1 ID=prot_L-elsbetiae_contig1420.3125.1|Name=mRNA_L-elsbetiae_contig1420.3125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp
VRLEGRQWGSTGSKKPRVGVYSIPGEKVHDPSWKNQDAGLAIAPIGQGEA
QALFAIFDGHGVNGRQASSECMERLPKYLLSASRSGSLPSALRRSCQRLH
RDLATGVAGDCMRSGTTLCAAVLNGRRLTVANVGDSGCLRLSRRTPSPDT
TPDVAGKPNAASGDPAAAGGTARRRGMGAAEHVLPGTGGRAGGSRGRLVA
QRLSRDHKPESTGELERIQAAGGIVFPLPRRDAAAGRDGGVIDVNFPPVA
GRQQATGIRNQGLTTARDFGAGIARVWRAGGDGPGLAMSRSIGDKMAHSV
GVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV
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mRNA from alignment at L-elsbetiae_contig1420:2675..5249-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1420.3125.1 ID=mRNA_L-elsbetiae_contig1420.3125.1|Name=mRNA_L-elsbetiae_contig1420.3125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2575bp|location=Sequence derived from alignment at L-elsbetiae_contig1420:2675..5249- (Laminarionema elsbetiae ELsaHSoW15)
GTCAGACTAGAAGGCCGACAATGGGGTTCGACTGGCTCAAAAAAGCCAAG AGTGGGGGTATACTCTATCCCCGGAGAAAAGGTGAACATTACTGTTGAGT GTACTCTTTACCAGTCGGGGACAAAAGTTTCAAGATATTAAACCCAAGAC ACGCGATCTATGAGGCACCCATGTGTTGCTTTGAGCAGTTTGTCCAGACG CCTTTGATCTGTGTGATAATTGTGAGTCAGCTGAATCTTTTAGGCCATTG CGAACCAACTGCTATGATCTTTGCCGTTTAGAGGTAGAAAGTGGAGTTAC TATCGCACGCAAGTTTATCTTACCTCCCCCCGTTCCAGTTGTAATGAAGG TCGGAAGATCCACTCTGTTGAATGAGGACAGTATTTTCAGTTGAACCCCA AATAATTAGGTTCCCATCAAGGTTGTGTGCTTTGTTAAGGTCGGGGAACA TGCGCGCCCAAGCGCATATCTTCCGGTCTTTTATTAAGGTTCTCCCGTTA AACGTGTGGCCTTGAGTGCCAAAATAGTGAATCGTGCGAAATGTGAAGAC AACTGAAATGTACAAGTTCCGTAAAATTTGGACGCGCAACCGTTTTTCGA TTGCGCCGTTATCTTTTCACCACCCTCAATTGGTGTTGGTGTGTCAACAG GTGCACGACCCTTCTTGGAAAAACCAAGATGCCGGCCTCGCTATTGCACC TATCGGTCAAGGGGAAGCTCAAGCTTTGTTTGCCATTTTTGATGGTGAGA GAGCGTGTTGTAGCGAAAATAATAGCGAAGAAGATTCCGACGTACTTTTT GTACCTGATATAGGAATACTTGCTCGCATGAGCAAGGTACCCATGACGTT GCCCAGTGTCATTTACTTTAGTGGTTGGCATCGAAGAATCCCTGAATGAG GCTGTTATAGCTCTTGGCTCAATCTTTATCATCTCACACAACGACTAAGA TGCTGTCCTTCGGGGCAGGTCTTGATGGACACACGGACGCCTAACTAACC AGTTTGGTTTCGTCTTCAGGTCACGGGGTGAACGGACGACAGGCATCCAG TGAGTGCATGGAGCGTCTGCCCAAGTATCTGCTATCAGCCTCCCGATCAG GAAGCCTCCCGTCGGCTCTCCGGTAAACGCCCACGTATTTGGTTTGGCCT ACCTTCATTTAGTACGGCACGGTGAACACGGAGCACGCCGCACTTTACGC GTTCCCGACGCCGGGTATGTGTCTGTAGTCAAGCCTATAGATTCCACATG CGAAACAGACCACGAGGTTATTTTCTGCTACGTTTGAGAGGGACACTGTG TCAGGCTCCCGTGTCGCAAGGTCGATCGGTTCTTAGCCGGAGAACGCCCC AAGCAACGGAAAAAGTGGCGCGAAACCGGTTTCGTTCGGATGATCCCCAC CGCTCCACCCAACGGACAACGCCGTCACTGTCAATTCTCAATCACAAACC GGGGCCCAGTTGCTACATATTACGTCGCGTTCGCATGATGGTGCGACCGT CCTCAACCGTCGTCTTGTTTCACATTCCGACTGTCAACAATCTAGACGCA GCTGCCAGCGACTGCATCGCGATCTTGCCACTGGTGTTGCGGGAGACTGT ATGCGCAGCGGAACGACCCTGTGCGCAGCGGTTCTCAACGGCAGACGGCT AACGGTGGCAAATGTAGGCGATTCCGGCTGCTTGCGCCTTTCGCGCCGCA CACCCTCCCCGGACACTACCCCTGATGTCGCTGGAAAACCCAATGCAGCG AGTGGCGATCCAGCGGCCGCGGGAGGCACCGCTAGAAGGAGAGGAATGGG GGCAGCGGAGCACGTTTTACCGGGCACCGGTGGTAGAGCGGGCGGCAGCC GGGGGAGACTGGTTGCGCAGCGCCTTTCGCGTGACCACAAACCGGAGAGC ACCGGTGAGCTAGAGAGGATCCAGGCTGCCGGTGGTATTGTTTTCCCTCT ACCTAGGAGAGACGCTGCTGCTGGACGCGACGGGGGCGTCATCGACGTGA ACTTTCCGCCGGTGGCAGGGCGTCAGCAAGCAACCGGAATCAGAAATCAG GGGCTGACGACGGCGAGAGACTTCGGGGCTGGGATCGCGAGGGTTTGGAG GGCCGGCGGTGACGGTCCAGGACTAGCGATGAGCCGGTCCATTGGAGACA AGGTGATATTGGGTGTTCCGTGTGCCTTAACGTATGGCTCGTGTTCTCTC TATAATAGGTTCGGCAAGTTTTTTTTTTCATTTTGGTTTGCCTCAATTTT CGTGCTCATGTCAGCAGCCTCATTTCCCTCCTGTCGACGTTGCAGTAAGA CTGACGGCTGATAAAAGAAAGAGTACGTAGGTTTACAAGTTGGTCTTCTG TGTGTGTGTTTATACGACATTTTCTGTTTGTAGGAGAACCTGCACTTACC GAACGCATTGTCAACTCGTTCGTATGCCGTTGTCTGCCAGATGGCCCACA GCGTGGGCGTTACTTACGAACCCGAGATTTCCGAGTTTGACTTAGACCCA CGAAGCGACGTGATGCTGGTGCTGGCATCCGATGGCGTATGGGACGTAAT GAGTGCGGAAGATATCCGCAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1420:2675..5249-

>mRNA_L-elsbetiae_contig1420.3125.1 ID=mRNA_L-elsbetiae_contig1420.3125.1|Name=mRNA_L-elsbetiae_contig1420.3125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2040bp|location=Sequence derived from alignment at L-elsbetiae_contig1420:2675..5249- (Laminarionema elsbetiae ELsaHSoW15)
GTCAGACTAGAAGGCCGACAATGGGGTTCGACTGGCTCAAAAAAGCCAAG
AGTGGGGGTATACTCTATCCCCGGAGAAAAGGTCAGACTAGAAGGCCGAC
AATGGGGTTCGACTGGCTCAAAAAAGCCAAGAGTGGGGGTATACTCTATC
CCCGGAGAAAAGGTGCACGACCCTTCTTGGAAAAACCAAGATGCCGGCCT
CGCTATTGCACCTATCGGTCAAGGGGAAGCTCAAGCTTTGTTTGCCATTT
TTGATGGTGCACGACCCTTCTTGGAAAAACCAAGATGCCGGCCTCGCTAT
TGCACCTATCGGTCAAGGGGAAGCTCAAGCTTTGTTTGCCATTTTTGATG
GTCACGGGGTGAACGGACGACAGGCATCCAGTGAGTGCATGGAGCGTCTG
CCCAAGTATCTGCTATCAGCCTCCCGATCAGGAAGCCTCCCGTCGGCTCT
CCGGTCACGGGGTGAACGGACGACAGGCATCCAGTGAGTGCATGGAGCGT
CTGCCCAAGTATCTGCTATCAGCCTCCCGATCAGGAAGCCTCCCGTCGGC
TCTCCGACGCAGCTGCCAGCGACTGCATCGCGATCTTGCCACTGGTGTTG
CGGGAGACTGTATGCGCAGCGGAACGACCCTGTGCGCAGCGGTTCTCAAC
GGCAGACGGCTAACGGTGGCAAATGTAGGCGATTCCGGCTGCTTGCGCCT
TTCGCGCCGCACACCCTCCCCGGACACTACCCCTGATGTCGCTGGAAAAC
CCAATGCAGCGAGTGGCGATCCAGCGGCCGCGGGAGGCACCGCTAGAAGG
AGAGGAATGGGGGCAGCGGAGCACGTTTTACCGGGCACCGGTGGTAGAGC
GGGCGGCAGCCGGGGGAGACTGGTTGCGCAGCGCCTTTCGCGTGACCACA
AACCGGAGAGCACCGGTGAGCTAGAGAGGATCCAGGCTGCCGGTGGTATT
GTTTTCCCTCTACCTAGGAGAGACGCTGCTGCTGGACGCGACGGGGGCGT
CATCGACGTGAACTTTCCGCCGGTGGCAGGGCGTCAGCAAGCAACCGGAA
TCAGAAATCAGGGGCTGACGACGGCGAGAGACTTCGGGGCTGGGATCGCG
AGGGTTTGGAGGGCCGGCGGTGACGGTCCAGGACTAGCGATGAGCCGGTC
CATTGGAGACAAGACGCAGCTGCCAGCGACTGCATCGCGATCTTGCCACT
GGTGTTGCGGGAGACTGTATGCGCAGCGGAACGACCCTGTGCGCAGCGGT
TCTCAACGGCAGACGGCTAACGGTGGCAAATGTAGGCGATTCCGGCTGCT
TGCGCCTTTCGCGCCGCACACCCTCCCCGGACACTACCCCTGATGTCGCT
GGAAAACCCAATGCAGCGAGTGGCGATCCAGCGGCCGCGGGAGGCACCGC
TAGAAGGAGAGGAATGGGGGCAGCGGAGCACGTTTTACCGGGCACCGGTG
GTAGAGCGGGCGGCAGCCGGGGGAGACTGGTTGCGCAGCGCCTTTCGCGT
GACCACAAACCGGAGAGCACCGGTGAGCTAGAGAGGATCCAGGCTGCCGG
TGGTATTGTTTTCCCTCTACCTAGGAGAGACGCTGCTGCTGGACGCGACG
GGGGCGTCATCGACGTGAACTTTCCGCCGGTGGCAGGGCGTCAGCAAGCA
ACCGGAATCAGAAATCAGGGGCTGACGACGGCGAGAGACTTCGGGGCTGG
GATCGCGAGGGTTTGGAGGGCCGGCGGTGACGGTCCAGGACTAGCGATGA
GCCGGTCCATTGGAGACAAGATGGCCCACAGCGTGGGCGTTACTTACGAA
CCCGAGATTTCCGAGTTTGACTTAGACCCACGAAGCGACGTGATGCTGGT
GCTGGCATCCGATGGCGTATGGGACGTAATGAGTGCGGAAGATATCCGCA
AGGTGATGGCCCACAGCGTGGGCGTTACTTACGAACCCGAGATTTCCGAG
TTTGACTTAGACCCACGAAGCGACGTGATGCTGGTGCTGGCATCCGATGG
CGTATGGGACGTAATGAGTGCGGAAGATATCCGCAAGGTG
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