mRNA_L-elsbetiae_contig14179.3105.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14179.3105.1
Unique NamemRNA_L-elsbetiae_contig14179.3105.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.240e-110
Identity = 196/296 (66.22%), Postives = 220/296 (74.32%), Query Frame = 1
Query:  175 LAVLLPAHGVEALLPVGGGNNMYR---RARPSGVTEQGPTPASDSKLCSVHTERDGDRNAPAQLCAPVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRVDG 1053
            L VL+ A   E+LL    G+   R    A  +G     PT    + L  +  E   D   P  L  P+LELITPDGCAS S S+ SSL++NI++AV GGVSLVQLRDY+SGAKSKA++AVR+  A KGRAL VVNG+P+ ARA+GADGVHLPERMMD   RLVG R  GEWPRIVGCSVHSVAAAV+AARLGADY+QVGTMFATQSHPGK PEG+ MLNDVRRQLQ E L  VLV+GVGGIDASNCG VV AGGDGVAAIRCLC SSDAEG+AR IVQDMR S      AGSR  G
Sbjct:   40 LLVLVGASTGESLLLSMAGSPYPRGCTTACAAGAAAS-PTRKGGAPLNGLGNEVAQDDATP--LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMD---RLVGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMRNS------AGSRFAG 323          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA)

HSP 1 Score: 181 bits (459), Expect = 4.010e-51
Identity = 117/231 (50.65%), Postives = 152/231 (65.80%), Query Frame = 1
Query:  364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGR-ALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQL-QAE---DLS--HVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFS--SDAEGEARSIVQDMRGSLAASC 1029
            PVLELITPDG A+  ++ ++  IR    AV GGV LVQ+RD  S A+SK  +A +L          +V+NG  +AA A GA GVHLPER++  V R      A E   +VGCSVHSV AAV AARLGADY+QVGTMFATQ+HPGK PEG Q+L  +R  L QA    +LS   VL++GVGGI+ +NC +V+ AGGDGVAAIR LC +  SD    A++++  ++ +   +C
Sbjct:   42 PVLELITPDGSAAQPSTHLAQKIR---AAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTR------AREALAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRAVAQALLAALQSAATPAC 263          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK)

HSP 1 Score: 139 bits (350), Expect = 1.560e-34
Identity = 96/234 (41.03%), Postives = 130/234 (55.56%), Query Frame = 1
Query:  364 PVLELITPDGCASLSTSDISS--LIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLY-AATKGRALLVVNGDPEAARASGADGVHLPE-RMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQL-----QAEDLSHV-----LVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAA 1023
            P L LITP+G  +   S+ +   ++  I  AVEGGVSLVQLRD  +  +  A M  R+     +  A+ +VNGD + A A  ADGVHLPE ++ D +      +  G    ++GCSVHS  AA++A  + ADYI VGTMF T SHPGK PEG + L  ++  +       +D +       LV GVGGID  NC +V+  GGDGVA I  LCF+   + +A  +   M   L A
Sbjct:    4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFINSYKNKKFNG----VLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEVTGFMAAFLTA 233          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT)

HSP 1 Score: 134 bits (337), Expect = 8.000e-34
Identity = 89/208 (42.79%), Postives = 125/208 (60.10%), Query Frame = 1
Query:  424 SLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGS 1041
            SL   + RAV GGV +VQLR+ +  A     +A+ L  AT+GR+LLVVN   + A A+GADG+HLPER + +    RL+G        R+VG SVHS+A AV+AA  GADY+ VG+++AT+SHPG  P GL +L +V  ++         V+ +GGI A    +VV AG  GVA I  +    +AE  AR + + +R + +   RAGS
Sbjct:   13 SLTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLPVAAARRLLGEG------RLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVSLP------VLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALRQAWS---RAGS 205          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT)

HSP 1 Score: 126 bits (316), Expect = 1.180e-30
Identity = 89/212 (41.98%), Postives = 119/212 (56.13%), Query Frame = 1
Query:  364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSI 993
            P L L+T    A L     ++      RAV GGV++VQLR+ +  A+    +A  L AA  GRALLVVN   + A A+GADGVHLPE  + +    RLVGP       R+VG SVHSV AAV+A   GADYI VG ++ T+SHP     G  +L+ VRR ++      V V+ +GG+ A+   + + AG  GVA I  +  S D E  AR +
Sbjct:   12 PCLMLVTDRSLAPLPLPQAAA------RAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLPVAKARRLVGPA------RLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGL 205          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A7X3VB43_9CHLR (Thiamine-phosphate synthase n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3VB43_9CHLR)

HSP 1 Score: 122 bits (305), Expect = 4.380e-29
Identity = 92/234 (39.32%), Postives = 128/234 (54.70%), Query Frame = 1
Query:  352 QLCAPVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRV 1047
            +L  P L L+T  G    ++ DI +  R    AV GGV +VQLRD +  A     +A  L + T+GRALL+VN   + A  SGADGV L E  +D     RLVG         ++G SVHSV  AVKA   GAD++ +GT+F T SHPG +  GL+++ DV       D   + VIG+GGI  SN   +V +G  G A I  +  ++D +  + +I++ MR   A SC A  R+
Sbjct:    4 KLPLPCLCLVTDRG--RTASDDIVNTARG---AVAGGVGMVQLRDKDCPAAEMLSLARELRSVTEGRALLIVNDRVDIALLSGADGVQLGENGLDAASARRLVGSE------MLIGRSVHSVEGAVKAESSGADFLVLGTIFETASHPGADTGGLKLVRDVT------DRIGIPVIGIGGISKSNVAGLVESGAAGAAVITAVSMAADPKAASLNILEAMRH--AYSCVAELRL 218          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2D9ZQG9_9CHLR (Thiamine-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A2D9ZQG9_9CHLR)

HSP 1 Score: 120 bits (301), Expect = 1.310e-28
Identity = 70/193 (36.27%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  439 IERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPR--IVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRG 1011
            + +AVEGGV+++Q RD +     +   AV+L   T+ +AL +VNGD + A+ + ADG+H PE+        V   D  +     I+G SVHS+  A+KA   G DY+ VGT+F ++SHP  +  G +++ D+ R+L       V +IG+GGI + NC +V+ +G  GVA I  +  + D + E+R I++++ G
Sbjct:   29 VSQAVEGGVNMIQFRDTDMHXTERLHXAVKLREITESKALFIVNGDIDLAKKAXADGIHFPEKH-------VXXADTEKLKENFILGKSVHSLEMAIKAVSAGIDYLIVGTIFPSKSHPQGQASGTKLIEDISRKLS------VPLIGIGGISSKNCQEVIDSGASGVAVIGAISEADDPKLESRIILENISG 208          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2E9LMX6_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9LMX6_9CHLR)

HSP 1 Score: 120 bits (301), Expect = 2.240e-28
Identity = 84/224 (37.50%), Postives = 124/224 (55.36%), Query Frame = 1
Query:  364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRA 1035
            P L L+T    A        SL+  + +AV+GGV+LVQLRD    A    E+AV L     G+A L+VN   + ARA+GADGV L E  + +       R  GE   ++G SVHS+++A+ A   GAD++ VGTM+A++SHPG+ P G  ++ D+  Q +        +IG+GGI   N  +++ AG  GVA I  +  +SD     RS  + M+  L AS ++
Sbjct:   15 PYLCLVTDPAVAG------DSLLERVVQAVQGGVNLVQLRDKTLPAGRLLELAVPLLEVMDGKAKLIVNDRADVARAAGADGVQLGEEGLPVAAAR---RSLGEG-LLIGRSVHSLSSALTAEADGADFLLVGTMYASRSHPGEPPAGPGLMRDISEQCRLP------LIGIGGITPENADEIIQAGASGVAVITNILAASDP----RSAAEKMKEILLASWKS 218          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2E8X697_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E8X697_9CHLR)

HSP 1 Score: 119 bits (299), Expect = 2.680e-28
Identity = 78/219 (35.62%), Postives = 119/219 (54.34%), Query Frame = 1
Query:  361 APVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSL 1017
            +P+L L+T       S  D+ +++ +   A+ GGV+++Q RD +     K EMA+ L   T+ +A+ VVNGD + A+  GADG+H PE M   +      +D      I+G SVHS  AA KA   G DY+ VGT+F + SHP  E  G +++ DV + L       + VIG+GGI + NC +V+ AG  GVA I  +  +   +  A  I + +  S+
Sbjct:    8 SPILCLVTNRN--RTSRRDLGTIVSD---AISGGVNMIQFRDKDMEGPEKLEMAINLRGLTRDKAIFVVNGDVDLAKQVGADGIHFPENMXSGIDFQELKKDF-----IIGKSVHSFDAATKAYFEGMDYLTVGTIFPSVSHPNGEVSGPEIIXDVTKNLS------IPVIGIGGISSENCIEVMKAGAAGVAVIGAISEAVSPKSAAXDIFEILESSI 210          
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.500e-28
Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 1
Query:  370 LELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPR-IVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRVDGVR*RILGCRFAGKPNQQNTARQKIDLREV 1140
            L  +TP G A+      + L R    A +GG SLVQLRD ++        A  +  A +G    VV    E          HLPER           R A E P   +GCS HSV A + AA LGADY+Q+GTMFATQ+HPGK PEG  +  + RR L   + +  L+IGVGG+DA+N  K++ AG DGVA IR +  + D E  AR+I + + G       AG+R+          + A     + TA+   D+RE+
Sbjct:   56 LVFVTPPGWAAADRR--ADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE----------HLPERKW---------RAATERPNGPLGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALDERE-APPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRALAG-------AGTRIS---------KAAQNTRAETTAQNAADVREL 275          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L486_9PHAE1.240e-11066.22TMP-TENI domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN05_9STRA4.010e-5150.65Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribo... [more]
A0A7S3XPQ6_HETAK1.560e-3441.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2H5YM77_9BACT8.000e-3442.79Thiamine-phosphate synthase n=1 Tax=bacterium HR25... [more]
A0A2H5YGE0_9BACT1.180e-3041.98Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID... [more]
A0A7X3VB43_9CHLR4.380e-2939.32Thiamine-phosphate synthase n=2 Tax=Dehalococcoidi... [more]
A0A2D9ZQG9_9CHLR1.310e-2836.27Thiamine-phosphate synthase n=4 Tax=root TaxID=1 R... [more]
A0A2E9LMX6_9CHLR2.240e-2837.50Thiamine-phosphate synthase n=1 Tax=Dehalococcoidi... [more]
A0A2E8X697_9CHLR2.680e-2835.62Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A8J2X006_9STRA3.500e-2837.60Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14179contigL-elsbetiae_contig14179:1156..3367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score340.1
Seed ortholog evalue1.1e-90
Seed eggNOG ortholog2880.D7FV85
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Thiamine monophosphate synthase
EggNOG OGs2S9Y2@2759,COG0352@1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-14_000170.1
Exons2
Model size1162
Cds size915
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14179.3105.1prot_L-elsbetiae_contig14179.3105.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14179 1256..3220 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815564.0125968-UTR-L-elsbetiae_contig14179:1155..12551622815564.0125968-UTR-L-elsbetiae_contig14179:1155..1255Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14179 1156..1255 -
1691682962.1810596-UTR-L-elsbetiae_contig14179:1155..12551691682962.1810596-UTR-L-elsbetiae_contig14179:1155..1255Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14179 1156..1255 -
1622815564.1931202-UTR-L-elsbetiae_contig14179:3220..33671622815564.1931202-UTR-L-elsbetiae_contig14179:3220..3367Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14179 3221..3367 -
1691682962.2102292-UTR-L-elsbetiae_contig14179:3220..33671691682962.2102292-UTR-L-elsbetiae_contig14179:3220..3367Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14179 3221..3367 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815564.052209-CDS-L-elsbetiae_contig14179:1255..15611622815564.052209-CDS-L-elsbetiae_contig14179:1255..1561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14179 1256..1561 -
1691682962.1904511-CDS-L-elsbetiae_contig14179:1255..15611691682962.1904511-CDS-L-elsbetiae_contig14179:1255..1561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14179 1256..1561 -
1622815564.1810083-CDS-L-elsbetiae_contig14179:2611..32201622815564.1810083-CDS-L-elsbetiae_contig14179:2611..3220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14179 2612..3220 -
1691682962.1993384-CDS-L-elsbetiae_contig14179:2611..32201691682962.1993384-CDS-L-elsbetiae_contig14179:2611..3220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14179 2612..3220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14179.3105.1

>prot_L-elsbetiae_contig14179.3105.1 ID=prot_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp
MACLGRCLSLAVLLPAHGVEALLPVGGGNNMYRRARPSGVTEQGPTPASD
SKLCSVHTERDGDRNAPAQLCAPVLELITPDGCASLSTSDISSLIRNIER
AVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARAS
GADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGAD
YIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDAS
NCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRV
DGVR*
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mRNA from alignment at L-elsbetiae_contig14179:1156..3367-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14179.3105.1 ID=mRNA_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2212bp|location=Sequence derived from alignment at L-elsbetiae_contig14179:1156..3367- (Laminarionema elsbetiae ELsaHSoW15)
ACTCTGTGTGCTCCAAGAAGCTTCGACATCGACATCCACGACAAAACGGC ATCAGCATCAGCATCAGCATCAGCATCAGCATCACCGAACGGCAAGCTGT GCGTACGGCACCATCGGAAACGACAGCCCAAGACTCCTGCCTTGCTTATG GCCTGCCTCGGTCGGTGCCTGTCTTTGGCTGTGCTTCTTCCTGCCCACGG CGTGGAGGCTCTGCTCCCTGTGGGCGGTGGAAACAACATGTACCGCCGTG CAAGACCCTCTGGCGTGACGGAACAAGGCCCAACACCGGCAAGCGACAGC AAGCTCTGCAGCGTGCACACCGAAAGGGATGGAGATAGGAACGCGCCTGC ACAGCTCTGCGCTCCAGTGTTGGAACTCATCACACCGGACGGTTGTGCGT CTTTATCGACCTCCGACATTTCATCGTTGATACGAAACATAGAGAGGGCC GTGGAGGGAGGTGTCTCGCTGGTGCAGCTCCGAGACTACGAGTCGGGCGC GAAGAGCAAGGCGGAGATGGCCGTCCGCCTATATGCTGCCACAAAGGGGC GTGCGTTGTTGGTCGTCAACGGGGATCCCGAAGCTGCTCGCGCTAGCGGT GCGGACGGGGTTCACCTTCCTGAGCGCATGATGGACATGGTGGGCCGTCT GGTGGGTCCACGCGATGCCGGAGAATGGCCCCGCATCGTCGGTTGCTCCG TTCACTCCGTTGCGGCAGCAGTCAAGGCCGCTAGGTTGGGTGCAGACTAT ATTCAGGTGCGTGCATACGCTACAACGAATGACAGCAAGAGGTCTCAAAC TAGAGCGGCAGAAGCAGGTGGAGAACGGCTCCGCTTGTTATTGCATTGAA GAACACAACACGGCGTGCCCTGAAACCGAGCCCTCCACTTGATAAGCGTA TGCGCCTATTTAGCACCACTCTCAGTGCATTTCTCGGTGATTTCCTGCCT TTCATTTTATCTGTAACCAGCGGTTTCCACGCTCAAGTGGTGCTGACCTT TACCCTTTTGCTGATTGGACCGAACTGGGCATCTCCTGAGTATCTTTCAA ATTCCCAAACGTATTTTACAGCAGTGTCGTGCACCTCTTTTACGGGCGGT AGTTAATATCCTCTGTGGACGCCCCATTTGCAGCGAACCTCCCCCCCCCA AATCGGGCTTGAATTCCATATCGAGTCTTTGCTCTAGTGTGGGTAAGGTT CCATCTTTGATTCTTTGTTTATTTTTAAAAACATTGAGAGTACCCCGGGG CAAACTTGGTTCTTCCATTTTTTGTTCGCCCTACATACCGCTGAGAAAGC CGTTAGATTCTTAGCTATTTTCGTCGGCTCCCACGAGACGTTCATGACAC CCACGCTATTCCCCCGTCATGATTGGTATAAGCTCCCCCAATCACTCTAT TTCTGCTTCTTTTGCTTCTTGCAAGAAGGAGCTCTCATAAAAGCGTCCTC TAGGCACGGTTGAGGCCCGACATCGTGGACTCGAGCGAGTGAATGTGCAA AAAAACAGACTGTACAACCCGGGGGGACTTTTCGCCCCGGGGTGTCTTTT TTCCTTCTAAAAGCATCCCTCTGCTGCCTTTGAGAACGCCCCGGGGCGAT ATTTTCAAGTCAAAATTATGGTCGCCCCCCGGGGCGTTCACAGAGCATAT CACGGTAGCCTTTGACCACGGTAGGCGCCCACATCAGTAGGAGCAGTTGG GATGTGAGACAAGAACAAATCGTTTTCTTAGTTCCAAAACAAACAACAGC AACAACAACATAGAAACTCCGGCACGCCCGCCGTGTCTCACCGCCGTGTG GCTCAGGTGGGTACCATGTTCGCCACTCAGTCACATCCGGGGAAGGAGCC AGAGGGATTGCAGATGCTAAACGACGTGCGACGGCAGCTGCAAGCCGAGG ACCTCAGTCATGTTTTGGTGATAGGTGTCGGCGGGATCGATGCATCGAAT TGTGGCAAAGTGGTGACGGCGGGTGGGGACGGTGTGGCCGCCATTAGATG CTTGTGTTTCAGCAGTGATGCGGAAGGGGAGGCCCGGAGTATTGTGCAGG ATATGAGAGGGAGCCTGGCAGCCTCTTGCCGCGCTGGATCTCGGGTTGAT GGAGTAAGATAGCGCATTCTGGGCTGCAGGTTTGCGGGCAAACCCAACCA ACAAAACACGGCGAGACAAAAAATCGACTTGCGTGAAGTGTGTATATGTA CCATGTGACTGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14179:1156..3367-

>mRNA_L-elsbetiae_contig14179.3105.1 ID=mRNA_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig14179:1156..3367- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCTGCCTCGGTCGGTGCCTGTCTTTGGCTGTGCTTCTTCCTGCCCA
CGGCGTGGAGGCTCTGCTCCCTGTGGGCGGTGGAAACAACATGTACCGCC
GTGCAAGACCCTCTGGCGTGACGGAACAAGGCCCAACACCGGCAAGCGAC
AGCAAGCTCTGCAGCGTGCACACCGAAAGGGATGGAGATAGGAACGCGCC
TGCACAGCTCTGCGCTCCAGTGTTGGAACTCATCACACCGGACGGTTGTG
CGTCTTTATCGACCTCCGACATTTCATCGTTGATACGAAACATAGAGAGG
GCCGTGGAGGGAGGTGTCTCGCTGGTGCAGCTCCGAGACTACGAGTCGGG
CGCGAAGAGCAAGGCGGAGATGGCCGTCCGCCTATATGCTGCCACAAAGG
GGCGTGCGTTGTTGGTCGTCAACGGGGATCCCGAAGCTGCTCGCGCTAGC
GGTGCGGACGGGGTTCACCTTCCTGAGCGCATGATGGACATGGTGGGCCG
TCTGGTGGGTCCACGCGATGCCGGAGAATGGCCCCGCATCGTCGGTTGCT
CCGTTCACTCCGTTGCGGCAGCAGTCAAGGCCGCTAGGTTGGGTGCAGAC
TATATTCAGATGGCCTGCCTCGGTCGGTGCCTGTCTTTGGCTGTGCTTCT
TCCTGCCCACGGCGTGGAGGCTCTGCTCCCTGTGGGCGGTGGAAACAACA
TGTACCGCCGTGCAAGACCCTCTGGCGTGACGGAACAAGGCCCAACACCG
GCAAGCGACAGCAAGCTCTGCAGCGTGCACACCGAAAGGGATGGAGATAG
GAACGCGCCTGCACAGCTCTGCGCTCCAGTGTTGGAACTCATCACACCGG
ACGGTTGTGCGTCTTTATCGACCTCCGACATTTCATCGTTGATACGAAAC
ATAGAGAGGGCCGTGGAGGGAGGTGTCTCGCTGGTGCAGCTCCGAGACTA
CGAGTCGGGCGCGAAGAGCAAGGCGGAGATGGCCGTCCGCCTATATGCTG
CCACAAAGGGGCGTGCGTTGTTGGTCGTCAACGGGGATCCCGAAGCTGCT
CGCGCTAGCGGTGCGGACGGGGTTCACCTTCCTGAGCGCATGATGGACAT
GGTGGGCCGTCTGGTGGGTCCACGCGATGCCGGAGAATGGCCCCGCATCG
TCGGTTGCTCCGTTCACTCCGTTGCGGCAGCAGTCAAGGCCGCTAGGTTG
GGTGCAGACTATATTCAGGTGGGTACCATGTTCGCCACTCAGTCACATCC
GGGGAAGGAGCCAGAGGGATTGCAGATGCTAAACGACGTGCGACGGCAGC
TGCAAGCCGAGGACCTCAGTCATGTTTTGGTGATAGGTGTCGGCGGGATC
GATGCATCGAATTGTGGCAAAGTGGTGACGGCGGGTGGGGACGGTGTGGC
CGCCATTAGATGCTTGTGTTTCAGCAGTGATGCGGAAGGGGAGGCCCGGA
GTATTGTGCAGGATATGAGAGGGAGCCTGGCAGCCTCTTGCCGCGCTGGA
TCTCGGGTTGATGGAGTAAGATAGGTGGGTACCATGTTCGCCACTCAGTC
ACATCCGGGGAAGGAGCCAGAGGGATTGCAGATGCTAAACGACGTGCGAC
GGCAGCTGCAAGCCGAGGACCTCAGTCATGTTTTGGTGATAGGTGTCGGC
GGGATCGATGCATCGAATTGTGGCAAAGTGGTGACGGCGGGTGGGGACGG
TGTGGCCGCCATTAGATGCTTGTGTTTCAGCAGTGATGCGGAAGGGGAGG
CCCGGAGTATTGTGCAGGATATGAGAGGGAGCCTGGCAGCCTCTTGCCGC
GCTGGATCTCGGGTTGATGGAGTAAGATAG
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