mRNA_L-elsbetiae_contig14176.3103.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14176.3103.1
Unique NamemRNA_L-elsbetiae_contig14176.3103.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 9.150e-84
Identity = 138/235 (58.72%), Postives = 167/235 (71.06%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSKWKRLHSQ 702
            MEEL+N  MN GENPD+YFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  MQ+ MRN+FLDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  ++KAFTAC+   XX    N+  +  EV           +DFT D D FD GFMFA  S+ +   SQ
Sbjct:  138 MEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSNCTXXXXXXNKHDSNDEVA---------VVDFTRDEDAFDSGFMFATCSRSQDATSQ 361          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 6.030e-79
Identity = 133/228 (58.33%), Postives = 159/228 (69.74%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 681
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  M + MRN+FLDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  + K FTAC+     S    +  +  EV           +DFT D D FD GFMFA  S+
Sbjct:  156 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSNKVFTACSNCTHCSSASKKDDSNNEVA---------VVDFTRDEDAFDSGFMFATCSR 372          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.160e-77
Identity = 131/230 (56.96%), Postives = 162/230 (70.43%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECY--VQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 681
            MEEL+N  MN GENPDDYFNQKH L ++ +KMGE +SDR FKDICV GF+DEY+D K+ ++RD TF+V  MQ+ MRN++LDEQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY   QG K PE +  ++KAFT C+     S T N+  +  EVT          +DFT D D FD GFMFA  S+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQXQGGKCPEDTKDSSKAFTPCSDCTHCSSTCNKHDSNNEVT---------VVDFTRDEDAFDSGFMFATCSR 219          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5JKH7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKH7_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 1.210e-75
Identity = 135/228 (59.21%), Postives = 160/228 (70.18%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 681
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF V  MQ+ MRN+FLDEQSRKG KGRIAGRG  MA T+  I C+   EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE +  ++KAFTAC+   XX     +  +  EV           +DFT D D FD GFMFA  S+
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFSVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICY---EPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTXXXXXXXKNDSNNEVA---------VVDFTRDEDAFDSGFMFATCSR 214          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 2.780e-75
Identity = 127/229 (55.46%), Postives = 157/229 (68.56%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNM-FLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFAIRSK 681
            MEEL+N  MN GENPDDYFNQKHL+R + +KMGE +SDR  KDI V GF+DEY+D K+ V+RD TF+   MQ+ +RN  + +EQSRKG KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWC  H TTSHSDEECY QG KRPE +  ++KAFTAC+     S  PN+  +  EV  A         DFT D D FD GFMF   S+
Sbjct:   96 MEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCCKHNTTSHSDEECYQQGGKRPEDTKDSSKAFTACSDCTHCSSAPNKNDSNNEVAVA---------DFTRDEDAFDSGFMFGTCSR 313          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 6.010e-74
Identity = 131/236 (55.51%), Postives = 161/236 (68.22%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACT-------QXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMF-AIRSK 681
            +++L+ T M  GENPDD+FN+KH LR + EKMGET+SDR FKDICV GF+++YKD KM V+RD +FDV QMQ  MRN+FLDEQ RK +KG+IAGRG  MA  + G  CF C+EPGH R++CP  + +    KKTKP GA KWCS+H TT+HSDEECY QGAKRPER+G   KAF+ACT       Q       P +  T KE       T K  +DF+ D D F  GFM+ AI SK
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTG---KAFSACTHXXXXXTQSRDTHAKPTKRETPKETE----KTEKAEVDFSYDEDTFKGGFMYHAICSK 364          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 6.960e-74
Identity = 112/165 (67.88%), Postives = 131/165 (79.39%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPE 495
            MEEL+N  MN GENPDDYFNQKHLLR + +KMGE +SDR FKDICV GF+DEYKD K+ V+RD TF+V  MQ+ MRN+FLDEQSRK  KGRIAGRG  MA T+  I C +C+EPGH R++CP++K +   +KKTKP GA KWCS H TTSHSDEECY QG KRPE
Sbjct:    1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKEWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRA--KKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRPE 163          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: D7G6Q1_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q1_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.530e-73
Identity = 132/228 (57.89%), Postives = 155/228 (67.98%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAAT-SEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSG-ATAKAFTACTQXXXXSGTPNRA--STAKEVTDAVTSTTKLAIDFTMDAD-FDEGFMFA 669
            ME+L NT M  G+NPDDYFN KHLLR K EKMGE +SDR+FKD+CV+GF  EYK+ KM ++RD  F+V  MQT M +M LDEQSRKGSKG IAGRG  M  T SE  TCF C E GH R++C Q + K   RK TKP GA KWC  H+TT +SDEECY QGAKRP     +T KAF+AC      S T +R   +TAKE      S+TK AID + D D  DEGFM+A
Sbjct:    1 MEKLDNTSMEPGQNPDDYFNHKHLLRHKVEKMGEKISDRYFKDMCVTGFTHEYKNVKMIMHRDPNFNVNHMQTTMHHMALDEQSRKGSKGGIAGRGFPMVTTASEQETCFGCGEKGHIRRNCLQRRGKGRQRK-TKPAGATKWCCFHFTTKNSDEECYGQGAKRPITDQISTDKAFSACAHCAHFSSTSDRKELTTAKEA-----SSTKAAIDSSTDGDESDEGFMYA 222          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 4.690e-73
Identity = 129/227 (56.83%), Postives = 160/227 (70.48%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTT----KLAIDFTMDAD-FDEGFMF 666
            +++L+ T M  GENPDD+FN+KH LR + EKMGET+SDR FKDICV GF+++YKD KM V+RD +FDV QMQ  MRN+FLDEQ RK +KG+IAGRG  MA  + G  CF C+EPGH R++CP  + +    KKTKP GA KWCS+H TT+HSDEECY QGAKRPER+G   KAF+ACT     S T +R + AK  T    + T    K  IDF+ D D F  GFM+
Sbjct:  136 LDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTSGPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRPERTG---KAFSACTHCVHCS-TQSRDTHAKPTTTETPTETEKTEKAEIDFSYDEDAFKGGFMY 358          
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 8.110e-73
Identity = 131/232 (56.47%), Postives = 161/232 (69.40%), Query Frame = 1
Query:    1 MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFNDEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMAAT-SEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTSHSDEECYVQGAKRPERSGATAKAFTACTQXXXXSGTPNRASTAKEVTDAVTSTTKLAIDFTMDADFDEGFMFAIRSKWKRL 693
            MEEL NT M   +NPDDYFNQKHLLR KAEKMGET+SD +F D CV+GF +EYKD KM +YRD  F+V +MQT MR+MFLDEQSR G KG IAGRG  M AT SE  TCF C E GH  ++C + + K   +KKTKP GAAKWCS+H+TT HSDEEC+ QGA RP++S  T KA +AC        T N+   A    +A  S+T+  IDF+ + + +EGFM+AI  K + L
Sbjct:  116 MEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTATTSEEPTCFDCGEKGHIWRNCSEKRGKG--KKKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKKSSNTGKALSACASCTHCFSTSNKTELAMTKQEA--SSTQAEIDFSAEGESEEGFMYAIVHKGEDL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14176.3103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF66_9PHAE9.150e-8458.72CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L580_9PHAE6.030e-7958.33CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE1.160e-7756.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKH7_9PHAE1.210e-7559.21gag_pre-integrs domain-containing protein n=1 Tax=... [more]
A0A6H5KXR7_9PHAE2.780e-7555.46CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN28_9PHAE6.010e-7455.51Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5KZM5_9PHAE6.960e-7467.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6Q1_ECTSI2.530e-7357.89CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJB9_9PHAE4.690e-7356.83Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5KW66_9PHAE8.110e-7356.47CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14176contigL-elsbetiae_contig14176:3532..4300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size769
Cds size756
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.8956823-CDS-L-elsbetiae_contig14176:3531..42871622815563.8956823-CDS-L-elsbetiae_contig14176:3531..4287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14176 3532..4287 +
1691682962.128793-CDS-L-elsbetiae_contig14176:3531..42871691682962.128793-CDS-L-elsbetiae_contig14176:3531..4287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14176 3532..4287 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.9075234-UTR-L-elsbetiae_contig14176:4287..43001622815563.9075234-UTR-L-elsbetiae_contig14176:4287..4300Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14176 4288..4300 +
1691682962.1376836-UTR-L-elsbetiae_contig14176:4287..43001691682962.1376836-UTR-L-elsbetiae_contig14176:4287..4300Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14176 4288..4300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14176.3103.1prot_L-elsbetiae_contig14176.3103.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14176 3532..4287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14176.3103.1

>prot_L-elsbetiae_contig14176.3103.1 ID=prot_L-elsbetiae_contig14176.3103.1|Name=mRNA_L-elsbetiae_contig14176.3103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MEELQNTHMNSGENPDDYFNQKHLLRLKAEKMGETVSDRWFKDICVSGFN
DEYKDEKMTVYRDSTFDVAQMQTIMRNMFLDEQSRKGSKGRIAGRGIVMA
ATSEGITCFACHEPGHSRKDCPQVKAKTVTRKKTKPKGAAKWCSIHYTTS
HSDEECYVQGAKRPERSGATAKAFTACTQCTHCSGTPNRASTAKEVTDAV
TSTTKLAIDFTMDADFDEGFMFAIRSKWKRLHSQPNRSYATDRHRRHGNH
D*
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mRNA from alignment at L-elsbetiae_contig14176:3532..4300+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14176.3103.1 ID=mRNA_L-elsbetiae_contig14176.3103.1|Name=mRNA_L-elsbetiae_contig14176.3103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=769bp|location=Sequence derived from alignment at L-elsbetiae_contig14176:3532..4300+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGAGCTACAAAACACGCACATGAACTCCGGGGAGAATCCAGACGA CTACTTCAACCAGAAGCACCTCCTTCGTCTGAAAGCTGAGAAAATGGGAG AGACGGTATCCGACCGGTGGTTCAAGGACATCTGCGTTTCCGGATTCAAC GATGAGTACAAGGACGAGAAAATGACGGTATACCGTGACTCGACCTTCGA CGTCGCCCAGATGCAAACTATCATGCGCAATATGTTCCTTGACGAGCAAT CACGCAAGGGATCGAAGGGCCGCATCGCCGGCCGCGGCATCGTCATGGCT GCCACTTCAGAGGGCATCACCTGCTTCGCCTGCCACGAACCCGGACACTC AAGGAAGGACTGCCCCCAGGTGAAGGCAAAGACCGTTACGAGGAAGAAGA CCAAGCCCAAGGGAGCAGCTAAGTGGTGCTCCATCCACTACACGACATCC CACTCCGACGAAGAATGCTACGTACAGGGAGCTAAACGCCCGGAACGGTC CGGCGCAACCGCCAAGGCATTCACCGCCTGCACTCAGTGCACCCACTGCT CTGGCACTCCCAACAGGGCCAGCACCGCGAAGGAGGTCACAGACGCGGTA ACTAGCACCACCAAGCTGGCGATCGACTTCACCATGGACGCGGACTTCGA CGAAGGATTCATGTTCGCCATACGAAGCAAGTGGAAGAGACTTCACTCCC AGCCAAACAGGAGCTACGCTACTGATCGACACCGGCGCCACGGAAACCAT GATTGACTCCAAGCTCATC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14176:3532..4300+

>mRNA_L-elsbetiae_contig14176.3103.1 ID=mRNA_L-elsbetiae_contig14176.3103.1|Name=mRNA_L-elsbetiae_contig14176.3103.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig14176:3532..4300+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGAGCTACAAAACACGCACATGAACTCCGGGGAGAATCCAGACGA
CTACTTCAACCAGAAGCACCTCCTTCGTCTGAAAGCTGAGAAAATGGGAG
AGACGGTATCCGACCGGTGGTTCAAGGACATCTGCGTTTCCGGATTCAAC
GATGAGTACAAGGACGAGAAAATGACGGTATACCGTGACTCGACCTTCGA
CGTCGCCCAGATGCAAACTATCATGCGCAATATGTTCCTTGACGAGCAAT
CACGCAAGGGATCGAAGGGCCGCATCGCCGGCCGCGGCATCGTCATGGCT
GCCACTTCAGAGGGCATCACCTGCTTCGCCTGCCACGAACCCGGACACTC
AAGGAAGGACTGCCCCCAGGTGAAGGCAAAGACCGTTACGAGGAAGAAGA
CCAAGCCCAAGGGAGCAGCTAAGTGGTGCTCCATCCACTACACGACATCC
CACTCCGACGAAGAATGCTACGTACAGGGAGCTAAACGCCCGGAACGGTC
CGGCGCAACCGCCAAGGCATTCACCGCCTGCACTCAGTGCACCCACTGCT
CTGGCACTCCCAACAGGGCCAGCACCGCGAAGGAGGTCACAGACGCGGTA
ACTAGCACCACCAAGCTGGCGATCGACTTCACCATGGACGCGGACTTCGA
CGAAGGATTCATGTTCGCCATACGAAGCAAGTGGAAGAGACTTCACTCCC
AGCCAAACAGGAGCTACGCTACTGATCGACACCGGCGCCACGGAAACCAT
GATTGAATGGAGGAGCTACAAAACACGCACATGAACTCCGGGGAGAATCC
AGACGACTACTTCAACCAGAAGCACCTCCTTCGTCTGAAAGCTGAGAAAA
TGGGAGAGACGGTATCCGACCGGTGGTTCAAGGACATCTGCGTTTCCGGA
TTCAACGATGAGTACAAGGACGAGAAAATGACGGTATACCGTGACTCGAC
CTTCGACGTCGCCCAGATGCAAACTATCATGCGCAATATGTTCCTTGACG
AGCAATCACGCAAGGGATCGAAGGGCCGCATCGCCGGCCGCGGCATCGTC
ATGGCTGCCACTTCAGAGGGCATCACCTGCTTCGCCTGCCACGAACCCGG
ACACTCAAGGAAGGACTGCCCCCAGGTGAAGGCAAAGACCGTTACGAGGA
AGAAGACCAAGCCCAAGGGAGCAGCTAAGTGGTGCTCCATCCACTACACG
ACATCCCACTCCGACGAAGAATGCTACGTACAGGGAGCTAAACGCCCGGA
ACGGTCCGGCGCAACCGCCAAGGCATTCACCGCCTGCACTCAGTGCACCC
ACTGCTCTGGCACTCCCAACAGGGCCAGCACCGCGAAGGAGGTCACAGAC
GCGGTAACTAGCACCACCAAGCTGGCGATCGACTTCACCATGGACGCGGA
CTTCGACGAAGGATTCATGTTCGCCATACGAAGCAAGTGGAAGAGACTTC
ACTCCCAGCCAAACAGGAGCTACGCTACTGATCGACACCGGCGCCACGGA
AACCATGATTGA
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