mRNA_L-elsbetiae_contig1415.3088.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1415.3088.1 vs. uniprot
Match: A0A6H5J884_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J884_9PHAE) HSP 1 Score: 571 bits (1471), Expect = 2.430e-202 Identity = 306/387 (79.07%), Postives = 343/387 (88.63%), Query Frame = 1 Query: 1 MASRRLSSAVASHASALATFAIAASAMLRIPTN--CSNSTEPAGDRRGNPRRKRERSEQEEEQPVNPCAEYNTLKWRMSYASRKDDCNSEDSCVFIGRSITGACAPRDPSILHKRRSLPKVPLVLPDSHGSSKQRNAVLQRQHTARVMSDTIDELESEFEEEG-EDYFDSTMAANKFKELMSALDVEESTQELAVAILKEEGLQAVQVFVKSQLANAAAEELRYQKSATKAFAKDFLIKVMRDPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDHTYQSSLTLTTPLIRWLLSETGWMDEEAAKLCAYLVRLEQTELATIWLAAWAIREPGMLDPAASRGLAASLPLGSQQMTDAMVWALSETLQSDWALEMAKSVTVEMIRS 1152 MA RL +AS+ASALA+ + ASA+ T+ CSNS + RRGN RR RERSE+E E PVNPCAE+NTLKWRMSYA RK+DCN EDSCVF+GRS+TGAC PRDPSILHKRRS P VPLVLPDS GS+K+ A LQRQHTA+VMS+TIDELESEFE +G E Y D+ +AANKF+ELMSALDVEESTQELA+AIL+EEG+ AVQVFVKSQLANAAAEELRYQKSAT+AFAKDFL++V+R+PELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLD+TYQSSLTLT PLIRWLLSET WMD EAAKLCAYLVRLEQTELATI L AWAIREPG+LDP++SRGLAASLPLGSQQ+TD+MVWAL+ETL+SDWALEMAKS TVEMI+S Sbjct: 1 MAGSRLCCTLASNASALASCTVVASAVQSSLTSLSCSNSEDGGSRRRGNNRRVRERSEEEAE-PVNPCAEFNTLKWRMSYAHRKNDCNGEDSCVFVGRSVTGACVPRDPSILHKRRSFPNVPLVLPDSDGSTKKLQAALQRQHTAKVMSETIDELESEFEHKGVEPYSDTKLAANKFRELMSALDVEESTQELALAILQEEGMHAVQVFVKSQLANAAAEELRYQKSATEAFAKDFLMEVIREPELPGQMGHMLESVFKDPALSTGIRHLIYNAVGLDYTYQSSLTLTIPLIRWLLSETDWMDAEAAKLCAYLVRLEQTELATILLVAWAIREPGILDPSSSRGLAASLPLGSQQITDSMVWALTETLKSDWALEMAKSTTVEMIKS 386 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1415.3088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1415.3088.1 >prot_L-elsbetiae_contig1415.3088.1 ID=prot_L-elsbetiae_contig1415.3088.1|Name=mRNA_L-elsbetiae_contig1415.3088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp MASRRLSSAVASHASALATFAIAASAMLRIPTNCSNSTEPAGDRRGNPRRback to top mRNA from alignment at L-elsbetiae_contig1415:3696..17994+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1415.3088.1 ID=mRNA_L-elsbetiae_contig1415.3088.1|Name=mRNA_L-elsbetiae_contig1415.3088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=14299bp|location=Sequence derived from alignment at L-elsbetiae_contig1415:3696..17994+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1415:3696..17994+ >mRNA_L-elsbetiae_contig1415.3088.1 ID=mRNA_L-elsbetiae_contig1415.3088.1|Name=mRNA_L-elsbetiae_contig1415.3088.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2304bp|location=Sequence derived from alignment at L-elsbetiae_contig1415:3696..17994+ (Laminarionema elsbetiae ELsaHSoW15)back to top |