mRNA_L-elsbetiae_contig14111.3067.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: D8LD63_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD63_ECTSI) HSP 1 Score: 235 bits (599), Expect = 2.040e-74 Identity = 108/121 (89.26%), Postives = 117/121 (96.69%), Query Frame = 1 Query: 1 TLQTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKGAQLTQV 363 +++TL+ALG KHLTLIQEGQVWRL+TPILLHGGVLHIFMNL+SQFRMGTFLEERWGT NWL+VYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMG WLSHV+CTW+EEDEF KGAQLTQV Sbjct: 210 SIETLMALGAKHLTLIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDEFAKGAQLTQV 330
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2THN5_9EUKA (Rhomboid-like protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THN5_9EUKA) HSP 1 Score: 110 bits (274), Expect = 1.060e-26 Identity = 49/104 (47.12%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 7 QTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTW 318 QT +G K+L IQEGQV+R VTPI+LHGG+LH+ NL Q R+G E RWG N+++ Y + G+G + SC+ SP+ + VGASGA++ ++G +S++I W Sbjct: 122 QTFKYMGAKYLPCIQEGQVYRFVTPIVLHGGILHLASNLFFQCRVGFIFELRWGLANYILTYVLTGIGASYFSCLMSPNSISVGASGALFGLIGADISYLIMNW 225
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S0H3J0_9EUKA (Rhomboid-like protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H3J0_9EUKA) HSP 1 Score: 108 bits (270), Expect = 4.380e-26 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 7 QTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKGAQLTQV 363 QT + +G K+L I+EGQV+R ++PILLHGG+LH+ NL Q R+G E RWG N++++Y + GLG + SC+ SP + VGASGA++ + G LS++I W K +L V Sbjct: 132 QTFLYMGAKYLPDIKEGQVFRFISPILLHGGILHLASNLFFQCRVGFIFELRWGLVNYVLIYLLTGLGASYFSCLISPKSISVGASGALFGLTGADLSYLIMNWRYLPNQEKFQELCMV 250
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A6T6G4P5_9STRA (Rhomboid-like protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6G4P5_9STRA) HSP 1 Score: 110 bits (274), Expect = 5.520e-26 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 25 GGKH-LTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKG 345 GGK+ +++E + WRL+TPI+LH GV+H+ N++ Q G F E WG+ NWL++Y LG ++LS +A PD + VG+SGA+ + GG L+ VIC E D+ +G Sbjct: 224 GGKNAFNILEEHEWWRLITPIMLHAGVIHLLCNIAVQLETGAFFEREWGSTNWLIIYLTSALGSSVLSVIAMPDAISVGSSGAVMGLFGGKLAEVICRCCESDKTEQG 331
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2UJ45_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ45_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.890e-24 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 25 GGKHLTLI-QEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVI 309 GGK+ LI E ++WRLVTP+ LH GV+H+F NL+ Q G F E WG+ WL VY V LGG ++SCV PD++ VG+SGA+ + G LS + Sbjct: 312 GGKNAYLIIDELKLWRLVTPVFLHAGVIHLFCNLAIQLETGAFFEREWGSARWLAVYLVSSLGGTIMSCVLDPDRISVGSSGALMGLFGAKLSEFL 407
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A6U0S1P1_9STRA (Rhomboid-like protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S1P1_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.250e-24 Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 25 GGKH-LTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDE 333 G K+ L ++ +G+ WRL+TP+LLH G+LH+ N+ Q+ +G F E+ WG+ WL+VY G+G ++LS PD + VG+SGAI + G LS + W+E E Sbjct: 111 GAKNALKILDDGENWRLLTPVLLHAGILHLIGNVHVQWDLGVFFEKEWGSAAWLIVYLTSGVGSSILSVYCMPDNISVGSSGAIMGLFGAKLSEIFVKWYEPRE 214
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.140e-24 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 22 LGGKHLTLIQ-EGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE--EDEFGK 342 LG K+ LI Q WRL TP+LLH G +H+ +N+ Q R+G LE +WG + ++Y G +LSC+A PD +GVG+SGAI I+G WL+ ++C W E+E G+ Sbjct: 211 LGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEEELGQ 320
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A812VT23_9DINO (Rhomboid-like protease n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VT23_9DINO) HSP 1 Score: 102 bits (255), Expect = 1.490e-23 Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 25 GGKHLT-LIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFGKGAQLTQV 363 GGK+ ++ +G+ WRL + +LH G +H+ NL Q G LE WG WLVVY+V G+ NLLSCV PD +GVG+SG + ++GGWLS + TW++ D + AQ+T + Sbjct: 180 GGKNAAKILLQGEWWRLASATMLHAGWIHLAGNLVVQLHAGIQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSI 296
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S0C3J6_9STRA (Rhomboid-like protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3J6_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.970e-23 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 25 GGKHLTLI-QEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVIC 312 GGK+ L+ E + WRL++P++LH GVLH+ N++ Q G F E WG+ WLVVY +GG LLSCVA PD V VG+SGA+ + G ++ V C Sbjct: 111 GGKNAYLVVNEYEYWRLLSPVVLHSGVLHLLGNVAIQLETGAFFEREWGSQIWLVVYLSSAMGGTLLSCVAEPDSVSVGSSGAVMGLFGAKIAEVFC 207
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A812XH88_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XH88_9DINO) HSP 1 Score: 102 bits (254), Expect = 6.560e-23 Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 25 GGKHLT-LIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFGKGAQLTQV 363 GGK+ ++ +G WRL + +LH G +H+ NL Q G LE WG WLVVY+V G+ NLLSCV PD +GVG+SG + ++GGWLS + TW++ D + AQ+T + Sbjct: 448 GGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSI 564 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14111.3067.1 >prot_L-elsbetiae_contig14111.3067.1 ID=prot_L-elsbetiae_contig14111.3067.1|Name=mRNA_L-elsbetiae_contig14111.3067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp TLQTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFback to top mRNA from alignment at L-elsbetiae_contig14111:2092..4352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14111.3067.1 ID=mRNA_L-elsbetiae_contig14111.3067.1|Name=mRNA_L-elsbetiae_contig14111.3067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2261bp|location=Sequence derived from alignment at L-elsbetiae_contig14111:2092..4352- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14111:2092..4352- >mRNA_L-elsbetiae_contig14111.3067.1 ID=mRNA_L-elsbetiae_contig14111.3067.1|Name=mRNA_L-elsbetiae_contig14111.3067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig14111:2092..4352- (Laminarionema elsbetiae ELsaHSoW15)back to top |