mRNA_L-elsbetiae_contig14059.3028.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14059.3028.1
Unique NamemRNA_L-elsbetiae_contig14059.3028.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 1.390e-138
Identity = 195/239 (81.59%), Postives = 213/239 (89.12%), Query Frame = 1
Query:    1 GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKP---AGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLHE 708
            GPNPE  VDRTFRGGTTSADDFQLSVLTNRHPEYLSRK+QF++ W KP    GVSVLRIFK++VP+DIRR+TE  M QVGNV+RRFHGTSC+++CTFFVDLRGGPCGE TC VC+ICTHGF+LR NVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFL+SV VGRAF T +GKL P    CPPPGFDSV+GE G  LNYPEVVVY+EEAALPTHL+VY LHE
Sbjct:  240 GPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQ--CPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYALHE 476          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.470e-97
Identity = 142/238 (59.66%), Postives = 178/238 (74.79%), Query Frame = 1
Query:    1 GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKP---AGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLH 705
            G N + +V+R F  GTT   DF+L VL+  HP Y S  +QF+  W KP    G+SV +I  ++VP D+RRKT+ + + VGNV+RRFHGTSC+  C FFVDLRG PC +  C VCSICTHGF L+GNVG TARRTNF LRYG+GLYFSSVSGKANDYA+ SEKTD +G+++RCMF+ +VA G+AF T +  L    N CPP G+DSV+GE G  LNY E+VVY++EAALPTHL+VY+ H
Sbjct:  220 GTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQ--QNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYSRH 455          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI)

HSP 1 Score: 277 bits (708), Expect = 3.120e-91
Identity = 131/230 (56.96%), Postives = 165/230 (71.74%), Query Frame = 1
Query:   13 ERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702
            + HV++TFRGGTT A DF LS L+  HP+Y S   QF+  W KP    VLRI ++KVP+DI +KT  + +  GNV+RRFHGTSC+  C FFVDL+G PC    CNVC+ICTHGF LR NV  TARR N+  RYG+GLYFSSVSGK+NDYA+ SEK    GKKVRCMF+ +V  G A+ T QG L    ++CPP G+DSV+GE G  L + E+V Y +EAA+P++L+VY L
Sbjct:    5 QSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSL--GQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYAL 232          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 3.640e-77
Identity = 122/234 (52.14%), Postives = 162/234 (69.23%), Query Frame = 1
Query:   13 ERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLH 705
            E +V   +  GT     F L  L   HPE  S + QF   W KP    G+SV+RIF+++VP ++R K +++   V N++RRFHGTSC+D C F VD +  PCG  +C++C+I   GF+L  NVG TA   NF+LRYG G+YFSSVSGKANDYA+L+ KT + G K+RCMF+ +VA G+A++T +  LD  D  CPPPG++SV+GE G  LNY E+VVY+EEAALPTHL+VY LH
Sbjct:  221 EPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALD--DGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYALH 449          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 3.870e-74
Identity = 113/204 (55.39%), Postives = 140/204 (68.63%), Query Frame = 1
Query:   19 HVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVD 630
            HV + FRGGTT A DF LSVL+  H +Y S   QF+  W K     V RI ++KVP DI  K   + +  GN++RRFHGTSC+  C FFVDL+G PC    CNVC+ICT+GF L+GNVG TA+RT+  LRYG+GLYFSSVSGK+NDYA+ SEK    GKKVRCMF+ +V  G A+ T Q  L    N+CPP G DSV+GE  ++
Sbjct:   69 HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSL--GQNMCPPAGHDSVVGEAPIE 270          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 9.020e-69
Identity = 109/158 (68.99%), Postives = 125/158 (79.11%), Query Frame = 1
Query:    7 NPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA-GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEK 477
            NPE HVDRTFRGG +  DDF+LSVLT  H  Y S KEQFL  + KP  G+SV RIFK++VP D+R+K +   E   N +RRFHGTSC+D C FF+DLRGGPCG P CNVCSICTHGFRLRG+VG TA+RTN +LRYG+GLYFSSVSGKANDYA  SEK
Sbjct:  225 NPEAHVDRTFRGGPS--DDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEK 380          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 2.810e-67
Identity = 113/216 (52.31%), Postives = 143/216 (66.20%), Query Frame = 1
Query:   70 LSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702
            L +L     EY + +  F   W KP    GVS+ R++ I+V  ++R K ER+    GN+ +RFHGTSC + C F VD +GG  PCG+ +C+VC+IC  GF+L  NV  TAR T   LRYG+G+Y +SVSGKANDYA  S K      ++RCMF+ SVAVGRAF T   +L PA N CPPPG+ SV+GE G  LN+ E VVY EEAALPTHL+VY L
Sbjct:   17 LQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRL-PA-NQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 8.160e-67
Identity = 106/158 (67.09%), Postives = 122/158 (77.22%), Query Frame = 1
Query:    7 NPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA-GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEK 477
            NPE HVDRTFRGG +  DDF+LSVLT  H  + S KEQFL  + KP  G+SV RIFK++VP D+R K +   +   N +RRFHGTSC+D C FF+DLRGGPCG P CNVCSICTHGFRLRG+ G TA+RTN  LRYG+GLYFSSVSGKANDYA  SEK
Sbjct:  195 NPEAHVDRTFRGGPS--DDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEK 350          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 9.830e-63
Identity = 120/239 (50.21%), Postives = 152/239 (63.60%), Query Frame = 1
Query:    7 NPERHVDRTFRGG-TTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGK-KVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702
            N E    RT RG  +       L  L     E  +  + F   W KP    GVS++RIF I+V  ++R K ER+  + GN+ +RFHGTSC + C F VD +GG  PCGE +C+VC+IC  GF+L  NV  TAR T F LRYG G+Y +SVSGKANDYA  S K  + G+ ++RCMF+ SVA+G  F T   +L PAD  CPPPG+ SV+GE G  LN+ E VVY+EEAALPTHL+VY L
Sbjct:  192 NVEHEQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK--KVGELELRCMFVASVALGNTFKTTSARL-PADQ-CPPPGYHSVVGEAGQRLNFDEFVVYKEEAALPTHLIVYAL 426          
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 8.150e-60
Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1
Query:   70 LSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVG-NVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVY 696
            L +L +   EY +  + F   W KP    GVS++RIF I+VP ++  K E +   V  N+++RFHGTSC D C F VD +G   PCG  +C+VC+IC  GF+L  NV  TAR +   LRYG G+YFSSVSGKANDYA LS KT   G ++RCMF+ +VA G+AF+T +  L  ++  CPP G  SV+GE G  LNY EVVVY+EEAALPTHL+VY
Sbjct:  462 LRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSE--CPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVY 674          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS86_ECTSI1.390e-13881.59PARP catalytic domain-containing protein n=2 Tax=E... [more]
D8LS87_ECTSI1.470e-9759.66PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU8_ECTSI3.120e-9156.96PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LS88_ECTSI3.640e-7752.14PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU6_ECTSI3.870e-7455.39PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LSB5_ECTSI9.020e-6968.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBF5_9PHAE2.810e-6752.31PARP catalytic domain-containing protein n=1 Tax=E... [more]
A0A6H5JPY9_9PHAE8.160e-6767.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXR2_ECTSI9.830e-6350.21PARP catalytic domain-containing protein n=1 Tax=E... [more]
D8LKU5_ECTSI8.150e-6052.09TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14059contigL-elsbetiae_contig14059:1462..4629 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score301.2
Seed ortholog evalue4.2e-79
Seed eggNOG ortholog2880.D8LS87
Hectar predicted targeting categoryother localisation
EggNOG OGs28J37@1,2S14A@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPoly(ADP-ribose) polymerase, catalytic domain
Ec32 orthologEc-12_004440.1
Exons5
Model size711
Cds size711
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14059.3028.1prot_L-elsbetiae_contig14059.3028.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14059 1462..4629 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815556.4369204-CDS-L-elsbetiae_contig14059:1461..15541622815556.4369204-CDS-L-elsbetiae_contig14059:1461..1554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 1462..1554 -
1691682957.511247-CDS-L-elsbetiae_contig14059:1461..15541691682957.511247-CDS-L-elsbetiae_contig14059:1461..1554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 1462..1554 -
1622815556.4520671-CDS-L-elsbetiae_contig14059:2168..23091622815556.4520671-CDS-L-elsbetiae_contig14059:2168..2309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 2169..2309 -
1691682957.5232224-CDS-L-elsbetiae_contig14059:2168..23091691682957.5232224-CDS-L-elsbetiae_contig14059:2168..2309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 2169..2309 -
1622815556.4679577-CDS-L-elsbetiae_contig14059:2677..28571622815556.4679577-CDS-L-elsbetiae_contig14059:2677..2857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 2678..2857 -
1691682957.533462-CDS-L-elsbetiae_contig14059:2677..28571691682957.533462-CDS-L-elsbetiae_contig14059:2677..2857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 2678..2857 -
1622815556.4826689-CDS-L-elsbetiae_contig14059:4044..41611622815556.4826689-CDS-L-elsbetiae_contig14059:4044..4161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 4045..4161 -
1691682957.5440347-CDS-L-elsbetiae_contig14059:4044..41611691682957.5440347-CDS-L-elsbetiae_contig14059:4044..4161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 4045..4161 -
1622815556.4983356-CDS-L-elsbetiae_contig14059:4449..46291622815556.4983356-CDS-L-elsbetiae_contig14059:4449..4629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 4450..4629 -
1691682957.5571094-CDS-L-elsbetiae_contig14059:4449..46291691682957.5571094-CDS-L-elsbetiae_contig14059:4449..4629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14059 4450..4629 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14059.3028.1

>prot_L-elsbetiae_contig14059.3028.1 ID=prot_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAG
VSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRG
GPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKA
NDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGF
DSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLHE*
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mRNA from alignment at L-elsbetiae_contig14059:1462..4629-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14059.3028.1 ID=mRNA_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3168bp|location=Sequence derived from alignment at L-elsbetiae_contig14059:1462..4629- (Laminarionema elsbetiae ELsaHSoW15)
GGGCCAAATCCTGAGCGTCACGTGGACCGAACTTTCCGAGGGGGCACGAC CAGCGCGGATGACTTCCAGCTGAGCGTGCTCACCAACCGCCACCCGGAGT ACCTCAGCCGGAAGGAACAGTTCTTAGAGGCGTGGGCCAAGCCCGCGGGC GTGTCGGTGCTGAGGATATTCAAAATCAAGGTGCGGATGAGTGGCTTCTT GGTCTTGTGAGAGGGGAGAAGGAAATAAAGAAGATTTATTTTTCGGGGCT TGTGCGAGGAGAGACACGTTGGGTGAAACATGGGGCTTTTGCTTTCGTAG TGACTTTGGAGCCACAGAACCCCCGCAGGATCGTTTCCACAGGCTGGACG TGTTTAGGCCGCTGACGCTTTGTAGAACGTTCAATTGAAGTCTCGTTAGA AGTACACCAGTATGTGTGTATCGGCTGTTCGCTCATCTTCCTGCTCTCAC CGGCCCGGGCCGGCACAGGTGCCCGAGGACATCCGCCGAAAGACCGAGCG GCACATGGAGCAAGTCGGCAACGTGAAGCGGCGATTCCACGGCACCTCGT GCACGGACATCTGCACCTTCTTTGTGGATTTGAGGGTGAGAGAGAGCAGG CGGCCTGATTGCCTGCCTTGATTTTGGGCCAGGTCAACGCTGGGCTGGGT TACGGCGGAGTGCTGGCCCTGGATGTTTTTCATACATATGTGTGGCACGA CCTGGGTCAACAGAGTCGTCTACATGCAACTCTTGAACATCCCCAGATAC CACTCTAAACCCGCAAAGTTCAATAGAAGGGCGGTAGCGGTATTGTACTC AAAAAGAGGGCATCTTCCATGTCGAGATTAACTCCTGGACCGCAATTCTT TTCCTGCGGGTGCGGCGTGTGGAAGAAGGTGTCGGACAAGACGAACAGAC GGAGAACCGTGTGCGTAAATGCCCCTGGTTTTGAACGTAAATGCCGTGTC TTGCGGTCGCTTGCGGCGCATCGCGAAGCGCGGTGTGACCGTTTCATTTC GGTCCCCGCGGCTCCTTGTGGCATACATATGCAAACCCCAGCGAGCACGG TTGGAGCTTTGTACTGCGCAGTAGTGGCTTACACCCGGCAAAAACGTGGT GCTGTAGCCCATGTAGCTTCGATACCTCACCCGGTGCCCACGCCCTGAAA ACAGAAAACCCAGGATAGAAACAAACCACTCGATTACAACGCCACTGTGT GTACCCTCACAAAGGGTAGACGACTGGAGTTAGAGACAAAAAAAAAAAAA AACACTCATCATGACCCACAGCAGTATACACGGAAGAACTTTATATGTCT GCGGGCGAGTTTGTCGGGGGGCTGGTTGATTCAGAGCCAAGCTTATCGGG GAAAAATGTAATAGACTGAAATAGTTCCAAGAGCCAGCACGTAGGTGGGG AGGCCCTTGGAGGCGAGCACGAGGAGAGAGAAGGTGCTCTCGTGAGCATG TCAGCTTGGCAAGGATTTATGTACAAGCGTTATGGTATCTTAGGCTTCCA ACGGAACTTCGACCTCACCGTCGACGAGGGAAAGGGACCGCTGAACCATT CCCGCGATAAAAATGCTAGGCGAGCACCGCAGAAGGTGGGAGTGGGGGCC TCGGGGGGAGGAACCCTCCCGTGTGACTACGGTTCAGTACTCTGGCAAAA TGCCCTCGTGGCAAGGAGCCCGTGGAGCACTGGAAATACATGTGAAGATG AAGAAAACAAAAACGGAGCCAACGACCAAAAATTGCCTTTTCCTCACGTG TCATCCCGCGCACGCGCGTCAGGGGGGCCCCTGTGGCGAACCCACGTGTA ACGTGTGCAGCATTTGCACCCACGGGTTCAGGCTCCGGGGTAACGTCGGA GACACGGCGAGGCGGACAAACTTCGACCTGCGCTACGGTGACGGGCTCTA CTTCAGCAGCGTCTCGGGCAAGGCCAATGACTACGCCGAGCTGTCCGAAA AGGTGAGTGTATGTAAGTGGGCTGCTGCAGCAGCTGCTGCTGCTGCTGCT GCTGCTGCTTCTATTGCTGCTATTGCTGCTGCTTTGCTGCTGCTATTGCT ACTGTTGTTACGTTCGAACAAGATTGCTGACGTTCGGTACGTGGGGGCCT TCACAGCCCTGCAGGGAAAGCTCGACCCGGCCGACACGAGACGCCGGCCA AGTTACCCCCATCCCTGATCCTTTCTCTCAGTCTCTCTTCCCACTCTTCC TCTCTCCCTCTTCCTGTCCCCCTTTTTGTCCCTCCCGCGGTGTCTCTTGC TATCGTGGCTCTGTCGTGCTTGTTGTGTATTCCCGCGTGCGACAAACGAA CTTGTTCATGACACACACAGACGGACAGGTCGGGGAAGAAGGTGCGGTGC ATGTTCTTGACCAGCGTCGCCGTCGGCAGAGCCTTCACAACCCTTCAGGG AAAGCTCGACCCGGCCGACAACCTCTGCCCCCCTCCCGGCTTCGACTCTG TCATGGGGGAGGTGAGACAAGGGACGCTATCGCAGCGGTAGTAGGAGCAT ACTAGTCTGACAAGGAGGAGTGTGTTGGGGTGTGTTGGGGGTAGTTTTTT GCGATTGGACACTGGCACATTTGAATGCTTGGCTGGTGGGTGAGATCGTG TTTGTGCGGAATGGTGTATCGGGTCGATTGAGCGAGCGTTTTGTCCTTTT TCGGGCGTACTCTCGATGGTTCGCGAGCCGACGGGCTGAGCTAACGCCGG GACACCTCTGGAAAAGTGAGGCATACGCCCCGTAGCAGAGGCCAGCGATG TCGTTTTTTTGCGCGAAAGAAAACACCAACGACAACGATGACGACGACGA CGGTAGCAATGTAGTCGCTTTCCGGCCGATCGATTGTGATTGGTCGGGCG AGTAATAGGGGGCACCCGAAAACGAAAATGAGGTTACAGCACTAATATTT AGTGATAAATTGTGTGGGTCCTTGTTTCAAATGTTTAATGCCCGCCGATC ACCATGGCCCATTCGCTCACCGGACCATTTCCAATTTGCCCCGGTGCGCC TCTCTCCCCATCCGCCCACCCCTAACGCTCGCTCCGTGTGGCATGCGGCA TCCATCGCTGTGACCGATCACCCAGCCCGGCGTCGACCTGAACTACCCCG AGGTGGTGGTTTACCGTGAGGAAGCAGCTCTGCCGACGCACTTGGTCGTC TACACTCTGCACGAGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14059:1462..4629-

>mRNA_L-elsbetiae_contig14059.3028.1 ID=mRNA_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig14059:1462..4629- (Laminarionema elsbetiae ELsaHSoW15)
GGGCCAAATCCTGAGCGTCACGTGGACCGAACTTTCCGAGGGGGCACGAC
CAGCGCGGATGACTTCCAGCTGAGCGTGCTCACCAACCGCCACCCGGAGT
ACCTCAGCCGGAAGGAACAGTTCTTAGAGGCGTGGGCCAAGCCCGCGGGC
GTGTCGGTGCTGAGGATATTCAAAATCAAGGGGCCAAATCCTGAGCGTCA
CGTGGACCGAACTTTCCGAGGGGGCACGACCAGCGCGGATGACTTCCAGC
TGAGCGTGCTCACCAACCGCCACCCGGAGTACCTCAGCCGGAAGGAACAG
TTCTTAGAGGCGTGGGCCAAGCCCGCGGGCGTGTCGGTGCTGAGGATATT
CAAAATCAAGGTGCCCGAGGACATCCGCCGAAAGACCGAGCGGCACATGG
AGCAAGTCGGCAACGTGAAGCGGCGATTCCACGGCACCTCGTGCACGGAC
ATCTGCACCTTCTTTGTGGATTTGAGGGTGCCCGAGGACATCCGCCGAAA
GACCGAGCGGCACATGGAGCAAGTCGGCAACGTGAAGCGGCGATTCCACG
GCACCTCGTGCACGGACATCTGCACCTTCTTTGTGGATTTGAGGGGGGGC
CCCTGTGGCGAACCCACGTGTAACGTGTGCAGCATTTGCACCCACGGGTT
CAGGCTCCGGGGTAACGTCGGAGACACGGCGAGGCGGACAAACTTCGACC
TGCGCTACGGTGACGGGCTCTACTTCAGCAGCGTCTCGGGCAAGGCCAAT
GACTACGCCGAGCTGTCCGAAAAGGGGGGCCCCTGTGGCGAACCCACGTG
TAACGTGTGCAGCATTTGCACCCACGGGTTCAGGCTCCGGGGTAACGTCG
GAGACACGGCGAGGCGGACAAACTTCGACCTGCGCTACGGTGACGGGCTC
TACTTCAGCAGCGTCTCGGGCAAGGCCAATGACTACGCCGAGCTGTCCGA
AAAGACGGACAGGTCGGGGAAGAAGGTGCGGTGCATGTTCTTGACCAGCG
TCGCCGTCGGCAGAGCCTTCACAACCCTTCAGGGAAAGCTCGACCCGGCC
GACAACCTCTGCCCCCCTCCCGGCTTCGACTCTGTCATGGGGGAGACGGA
CAGGTCGGGGAAGAAGGTGCGGTGCATGTTCTTGACCAGCGTCGCCGTCG
GCAGAGCCTTCACAACCCTTCAGGGAAAGCTCGACCCGGCCGACAACCTC
TGCCCCCCTCCCGGCTTCGACTCTGTCATGGGGGAGCCCGGCGTCGACCT
GAACTACCCCGAGGTGGTGGTTTACCGTGAGGAAGCAGCTCTGCCGACGC
ACTTGGTCGTCTACACTCTGCACGAGTAACCCGGCGTCGACCTGAACTAC
CCCGAGGTGGTGGTTTACCGTGAGGAAGCAGCTCTGCCGACGCACTTGGT
CGTCTACACTCTGCACGAGTAA
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