mRNA_L-elsbetiae_contig1400.2998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: D8LIZ6_ECTSI (Chp-1 / RAR1 homologue n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIZ6_ECTSI) HSP 1 Score: 560 bits (1443), Expect = 3.520e-196 Identity = 276/341 (80.94%), Postives = 293/341 (85.92%), Query Frame = 1 Query: 61 MKVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSG-----PEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATR----AAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCEKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAAKPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDDASGDFSNPPPPAA 1056 MKVYVH+EEGSDAELHVTLKLTLPKKW+DESPVRLL+LFIDSYNKRKPDNQLDV ECHLE G+ EQAL KGDTIGATITDRADV+VRPGATKEG+GAAA XXXXXXXXXXX A P +AG LRCRNFGCNQ++DE +NSDTACRFHT PPIFHDTRKGW CC+KRVYDWDEFEQLQGCQ GRHSTVDPKDRLPP+PP+ EQ+ AAKPAPVLKSIDNYNAENP AAT KCTRRPDGTASCVNLGCQKDFVVA+N RDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDF+AVPGCC GFHDDASG+FSNPPP AA Sbjct: 1 MKVYVHFEEGSDAELHVTLKLTLPKKWNDESPVRLLKLFIDSYNKRKPDNQLDVDECHLETGASLDQGAEEQALAKGDTIGATITDRADVFVRPGATKEGMGAAAXXXXXXXXXXXXXXXXXXXXXXATAPKRAGALRCRNFGCNQYYDEADNSDTACRFHTGPPIFHDTRKGWSCCKKRVYDWDEFEQLQGCQVGRHSTVDPKDRLPPNPPSAEQEVAAKPAPVLKSIDNYNAENPEAATAAGSAVKSITAKKKCTRRPDGTASCVNLGCQKDFVVAENQRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFMAVPGCCIGFHDDASGEFSNPPPGAA 341
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A836CMP5_9STRA (Chp-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP5_9STRA) HSP 1 Score: 351 bits (900), Expect = 9.290e-114 Identity = 180/341 (52.79%), Postives = 218/341 (63.93%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDE-SPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCEKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAAKPAPV--------------LKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQ-KDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDDASGDFSN 1038 KVY+HYEEGSDAELH TLKLTLP+KW E SP+++L+LFI+SYNK+KP L CHLE G AL GD IG + DR D+ VRPGATK G A+ XXXXXX AA + LRCRN+GC + E +N AC HTAPP+FHDT+KGW CC KRVYDWDEF+ + GC G HSTVDPK ++ PS ++SI+ YNA NP AAT X +CTRR DGTA C+N GC+ +DFVVA+N RD+C +HRL PVFHD GK+W CCPD+VKYEF+DF+A+PGCC G+H D SG+F N Sbjct: 4 KVYLHYEEGSDAELHTTLKLTLPRKWVAEGSPMQVLELFIESYNKKKPQTPLSAEACHLENSDG--LALSAGDVIGDVMRDREDIRVRPGATKPGKSDVATAAAGGXXXXXXXAAADTDGL------LRCRNYGCGARYAEADNHARACAHHTAPPVFHDTKKGWSCCAKRVYDWDEFQAIAGCATGPHSTVDPKVQIAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSIEAYNAANPQAATAAGSVLKAXAAAPRCTRRADGTARCLNKGCKAQDFVVAENARDACTHHRLGPVFHDTGKYWACCPDRVKYEFDDFLAIPGCCRGYHQDGSGEFDN 336
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A6V2Q7H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Q7H8_HETAK) HSP 1 Score: 349 bits (896), Expect = 1.220e-113 Identity = 172/336 (51.19%), Postives = 206/336 (61.31%), Query Frame = 1 Query: 61 MKVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCEKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAA--KPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXX-KCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDDASGDFSNPP--PPA 1053 MKVYVHYEEGSD LH TLKLTLPKKW+D+ ++L LF++SYN + P N L++ HLE G Q + D + + DR D++VRPGA A A+ ++ G LRCRN+GCNQ++ E N AC HTAPPIFHD RKGW CC KRVYDWDEF+Q+ GC G HSTVDP+ SP AA P PVLKSID +N NP A T KCTRR DGTA C N GCQ+DFVVA+N SC YH NPVFHD GK+W CCP +VKY+F+DF+ + GCCTG+H D SG+F NP PPA Sbjct: 1 MKVYVHYEEGSDESLHKTLKLTLPKKWADKETNKVLDLFLESYNAKNPGNLLEMGSVHLENSRG--QKMSGQDLVKDLMNDREDIHVRPGAPPAHQEAPAAKEQ-------------KSEAQTNEGKLRCRNYGCNQWYLEAENGPEACGHHTAPPIFHDARKGWSCCAKRVYDWDEFQQIAGCARGPHSTVDPQVTFAASPTVAAADAAEAKNPGPVLKSIDQFNEANPEAVTAAASAVQTLKVSGQKCTRRGDGTAKCTNKGCQRDFVVAENTPRSCTYHAANPVFHDTGKYWSCCPGKVKYDFDDFMKIAGCCTGYHQDGSGEFDNPESLPPA 321
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: W7U2Z9_9STRA (Chord family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z9_9STRA) HSP 1 Score: 308 bits (788), Expect = 2.740e-97 Identity = 148/332 (44.58%), Postives = 199/332 (59.94%), Query Frame = 1 Query: 61 MKVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPD-NQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVR--PGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCEKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPP--------NGEQQAAAKPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDDAS 1023 MK+YVHYEE E +TLKLTLPK W+++ +++L+LFI+SYNK+K LD H+E G L G+ + ++DR D+Y+R PG + + +S A+ + G LRC+N+GCNQ F E NNS+ ACRFH APP+FHDT+KGW CC KRVYDWDEF ++GC GRHS +DPK+ PSP G+ + A V+KSID +N NP AA +CT +PDG+A+C+N GCQKD+++ +N +CRYH PVFHD GK+W CCP VKY+F+DF+ +PGC H D S Sbjct: 1 MKLYVHYEEAGQDEKALTLKLTLPKSWAEQPLLQVLELFIESYNKKKTGLPPLDKDFVHMEKAGGV--ILPVGNIVSDMLSDRDDLYIRSGPGPARGKIAHLSSPPN------------AHASSESSTGLLRCKNYGCNQSFSEENNSEEACRFHKAPPVFHDTKKGWSCCAKRVYDWDEFHTIEGCTTGRHSLIDPKEIFAPSPTLAAAAQAERGDCSNTSSAATVIKSIDEFNQSNPNAAAACKTAASMTQAGTRCTVKPDGSATCLNKGCQKDYLLKENHPSACRYHAAGPVFHDAGKYWSCCPGTVKYDFDDFLKIPGCMLSSHYDGS 318
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A8K1FGH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH1_PYTOL) HSP 1 Score: 274 bits (700), Expect = 4.270e-84 Identity = 141/330 (42.73%), Postives = 186/330 (56.36%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVR--PGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCE-KRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAAKPA---------PVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 KVY+HYEEG++ ELHVTLK+TLP KW+ + L F+D YN +KPDN+L+ +E HLE + L D + + D++++ P T+ AA AV L+C+N+GC +DE +N D ACR H PP+FHDT+KGW CC K VYDWD+FE+++ C GRHSTV+P + SP ++A PVLKSID+YN +NP A T R DG A CVN GCQK++VVA+N +C +H PVFHD GK+W CCP VKY+FEDF+ VPGC T H+D Sbjct: 29 KVYMHYEEGAE-ELHVTLKMTLPSKWAGHTVDYLKAFFVDHYNTKKPDNKLEASEYHLEKKN--HNVLYGDDLLHTAVEKYEDIFLKAGPSTTRPPKPEAAK------------------AVAVNKNLLQCKNYGCRAKYDEADNHDQACRHHMKPPLFHDTKKGWQCCSSKMVYDWDDFEKIEPCAVGRHSTVEPSAQFAASPTVALAESAGAXXXXXXXXXXXPVLKSIDDYNQKNPNAVTAVSAATEEKVSTA--AGRTDGKARCVNFGCQKEYVVAENHEQACTHHTGPPVFHDAGKYWSCCPKAVKYDFEDFLKVPGCATAAHND 335
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A1V9YKW6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKW6_9STRA) HSP 1 Score: 263 bits (672), Expect = 5.390e-80 Identity = 138/326 (42.33%), Postives = 189/326 (57.98%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGD-TIGATITDRADVYVRPGAT-----KEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCE-KRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNG-EQQAAAKPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 K+Y+H+EEG +A H+TLKLT+P KWS + RL + F+++YN+++P+N++D A+ HLE GPE + +GD TI TI R D+YV+ G + K+ L E P + ++C+NFGC + F + N + ACR+H APP FHDT+KGW CC K VYDWD+FE+++ C G HS V + + P+ P A PA LKSID+YN NP AAT +R DG A CVN GCQ ++ V N SC +H PVFHD GK+W CCP +VKY+F++F+ VPGC G H D Sbjct: 18 KIYLHFEEGDEAH-HLTLKLTIPSKWSGATIDRLKEFFLETYNEKRPNNKVDPAQFHLE---GPENRILRGDETIHDTIKSRDDIYVKSGPSTFKHKKDPLDGRTLAGSPANDDHTEE---REREAPKEL--VQCKNFGCREKFVDSENHELACRYHKAPPTFHDTKKGWSCCSSKMVYDWDDFEKIEPCTVGFHSAVGNQAPVVPAAPIALPTPVVAAPAAPLKSIDDYNKANPDAATSVASITAKPAPP----KRTDGKAKCVNYGCQAEYFVDINNDKSCAHHAGAPVFHDSGKYWSCCPKEVKYDFDEFLKVPGCTVGPHKD 330
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: K3X7U4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7U4_GLOUD) HSP 1 Score: 263 bits (671), Expect = 6.490e-80 Identity = 143/329 (43.47%), Postives = 184/329 (55.93%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGA-TKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCE-KRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPP-----NGEQQAAAK----PAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 KVY+H+EEG+DA LH+TLK+TLP KW+ + L + F++ YN +KP+++LD A HLE S AL + + + D++++ GA TK+ + A E A +AA L+C+NFGC + F E +N D AC H PP FHD +KGW CC K VYDWD+FE++ C+ RHS V P + SP N E AA APVLKSID+YN NP A T R DG A CVN GCQK++VVA+N SC +H PVFHD GK W CCP VKY+FE F+ VPGC T H D Sbjct: 18 KVYMHFEEGADAALHLTLKMTLPSKWASHTVDYLKEFFVEHYNTKKPESKLDGALFHLERKS---TALHGDELLHYAVQKHDDLFLKSGASTKKPVKA--------------EGVAKKAAAAQNL--LQCKNFGCAKKFAEEDNHDEACHHHAQPPTFHDMKKGWSCCSSKMVYDWDDFEKIPACKVSRHSVVAPSAQFAKSPTVLAAENAEALGAASVPAPAAPVLKSIDDYNKTNPNAVTAVSAAVDNLTSAAPA--RTDGKARCVNYGCQKEYVVAENSPTSCTHHTGPPVFHDAGKFWSCCPKNVKYDFESFLQVPGCATAAHRD 325
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: H3GU82_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU82_PHYRM) HSP 1 Score: 259 bits (663), Expect = 8.600e-79 Identity = 135/326 (41.41%), Postives = 183/326 (56.13%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCCE-KRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAA-------KPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 KVY+HYEEGS+A+ +TLK+TLP KW+ + L + F++ YN +KP+N LD A+ HLE G Q G + + + D++++ GA+ + AAV + L+C+N GC + F E NSD ACR H+ PP+FHD +KGW CC K VYDWD+FE+++ C GRHS V P + SP ++AA PA LKSID+YN +NP A T +R DG A+CVN GCQ+++VVA+N SCR+H PVFHD K W CCP VKY+F+ F+ VPGC H D Sbjct: 14 KVYMHYEEGSEAQT-LTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPENALDGAQMHLEK-KGDAQLFGD-ELLHTAVNKYDDLFLKAGAST---------------LKPVRVQKIAAAVESDKNLLQCKNHGCQKKFLEEENSDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIVGRHSAVGPNSQFAASPTVAAAESAAGXXXXXXPPAAPLKSIDDYNQKNPDAVTAVSSAKESQQAPAP--KRTDGKANCVNYGCQQEYVVAENTEASCRHHAGAPVFHDASKFWSCCPKDVKYDFDSFLKVPGCVVSAHTD 319
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A6G0XA72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA72_9STRA) HSP 1 Score: 259 bits (661), Expect = 1.700e-78 Identity = 136/325 (41.85%), Postives = 182/325 (56.00%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCC-EKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQ------AAAKPAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 KVY+H+EEG +A H+TLKLT+P KWS + RL + F+++YN+RKPDN+++ E HLE G + L +TI I +R D+YV+PG + + A ++C+NFGC + F++ NN TAC+ HT PP FHD +KGW CC EK YDW+EFE++ C G HS V P + P G A A PA LKSID+YN +NP A T K R DG A CVN GCQK++VVA+N SC +H PVFHD GK+W CCP +KY+F++F+ +P C H D Sbjct: 18 KVYLHFEEGEEAN-HLTLKLTIPSKWSGATIDRLKEFFLETYNERKPDNKVNPVEYHLERSEG--RILRGDETIHEMIKNRDDIYVKPGPST--------------FKHRKDFADEERERQQPKDLIQCKNFGCREKFNDANNHATACKHHTQPPTFHDGKKGWQCCMEKLAYDWEEFEKIAPCAVGFHSAVGLA--APKAEPTGFGAPIPILAAPAAPATALKSIDDYNEKNPDAVTAVSAIKAPKP---KPAPRADGKAKCVNYGCQKEYVVAENNDTSCPHHAGAPVFHDSGKYWSCCPKVIKYDFDEFLKIPPCVVTAHSD 320
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Match: A0A024U7E8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7E8_9STRA) HSP 1 Score: 254 bits (649), Expect = 9.140e-77 Identity = 134/323 (41.49%), Postives = 179/323 (55.42%), Query Frame = 1 Query: 64 KVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNQLDVAECHLEAGSGPEQALGKGDTIGATITDRADVYVRPGATKEGLGAAASXXXXXXXXXXXELAATRAAVPAKAGGLRCRNFGCNQFFDEVNNSDTACRFHTAPPIFHDTRKGWGCC-EKRVYDWDEFEQLQGCQEGRHSTVDPKDRLPPSPPNGEQQAAAK----PAPVLKSIDNYNAENPAAATXXXXXXXXXXXXXKCTRRPDGTASCVNLGCQKDFVVADNGRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFIAVPGCCTGFHDD 1017 K+Y+H+EEG +A H+TLKLT+P KWS + RL + F+D+YN+RKPDN++D HLE +AL +TI TI +R D+YV+ G + +LA A ++C+NFGC + F+ V N +AC+ HT PP FHDT+KGW CC EK VYDW++FE ++ C G HST + P P A PAP +KSID YN NP A T R DG A CVN GCQK++VVA+N +C +H P+F D GKHW CCP VKY+F++F+ +P C H D Sbjct: 18 KIYLHFEEGDEAN-HLTLKLTIPSKWSGATVDRLKEFFLDTYNERKPDNKVDPNAYHLERSE--NRALRGDETIHDTIKNRDDIYVKLGPST--------------YKHKKDLADEERERLAPKDLVQCKNFGCREKFNPVENHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIEPCAVGFHSTTG----IAPPPKEESTGFGAPVLVVPAPAVKSIDEYNQNNPNAVTAVSAAAPKSKPAAV---RTDGKARCVNYGCQKEYVVAENNERACPHHVGAPIFRDAGKHWSCCPKIVKYDFDEFLKIPPCVVTAHTD 316 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1400.2998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1400.2998.1 >prot_L-elsbetiae_contig1400.2998.1 ID=prot_L-elsbetiae_contig1400.2998.1|Name=mRNA_L-elsbetiae_contig1400.2998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp MKVYVHYEEGSDAELHVTLKLTLPKKWSDESPVRLLQLFIDSYNKRKPDNback to top mRNA from alignment at L-elsbetiae_contig1400:14791..20678+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1400.2998.1 ID=mRNA_L-elsbetiae_contig1400.2998.1|Name=mRNA_L-elsbetiae_contig1400.2998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5888bp|location=Sequence derived from alignment at L-elsbetiae_contig1400:14791..20678+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1400:14791..20678+ >mRNA_L-elsbetiae_contig1400.2998.1 ID=mRNA_L-elsbetiae_contig1400.2998.1|Name=mRNA_L-elsbetiae_contig1400.2998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig1400:14791..20678+ (Laminarionema elsbetiae ELsaHSoW15)back to top |