mRNA_L-elsbetiae_contig1400.2996.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: D8LIZ8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ8_ECTSI) HSP 1 Score: 214 bits (545), Expect = 1.590e-68 Identity = 107/114 (93.86%), Postives = 113/114 (99.12%), Query Frame = 1 Query: 28 QVETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 +VETAARPYAFIKFDKVIQRKRKE+LDPQSRNNMARLNDDLADIH+IMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAM +A++FILWWKFF Sbjct: 110 KVETAARPYAFIKFDKVIQRKRKEFLDPQSRNNMARLNDDLADIHSIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMVIAILFILWWKFF 223
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A835Z3W0_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W0_9STRA) HSP 1 Score: 177 bits (449), Expect = 6.000e-54 Identity = 88/113 (77.88%), Postives = 102/113 (90.27%), Query Frame = 1 Query: 28 QVETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKF 366 QVET +RPY FIKFDKVIQRKR+EYLDP SR+NMARLN DLADIH+IMK+NI+EVLNRGE+LDHVS+ISK L+TQAEQFKW+SKKLSLMALWQKY P+ A+ L V+ LW+KF Sbjct: 110 QVETVSRPYGFIKFDKVIQRKRREYLDPSSRDNMARLNSDLADIHDIMKKNIQEVLNRGERLDHVSQISKDLATQAEQFKWNSKKLSLMALWQKYAPMVAILLVVLITLWYKF 222
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A6G0WBK5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBK5_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.040e-44 Identity = 73/113 (64.60%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDKVIQ+KRKEY DP S N+++LN DLADIHN+M+QNI+EVLNRGE +D VS+IS ++ ++++FKW+SKKLSL AL+QKY P+ A+ L VV +++WKFF Sbjct: 111 VTTVARPYAFIKFDKVIQKKRKEYTDPSSSQNVSKLNSDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWASKKLSLQALYQKYAPLAAVGLFVVLVIYWKFF 223
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A485KKL0_9STRA (Aste57867_8523 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KKL0_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.630e-43 Identity = 71/113 (62.83%), Postives = 95/113 (84.07%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDK IQ+KRKEY DP S NM++LN+DLADIHN+M+QNI+EVLNRGE +D VS+IS ++ ++++FKW +KKLSL A++QKYGP+ A+ L VV ++++KFF Sbjct: 111 VTTVARPYAFIKFDKFIQKKRKEYTDPSSSQNMSKLNNDLADIHNVMRQNIQEVLNRGEAIDRVSQISSNIADRSKEFKWGAKKLSLQAMYQKYGPLVAIGLFVVLVIYFKFF 223
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A067CJ44_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ44_SAPPC) HSP 1 Score: 146 bits (368), Expect = 1.100e-41 Identity = 70/113 (61.95%), Postives = 94/113 (83.19%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDK IQRKRKEY DP S NM+++N+DLADIHN+M++NI+EVLNRGE +D VS++S L+ +++ FKW +KKLSL A++QKYGP+ A+ L +V +L++KFF Sbjct: 111 VTTIARPYAFIKFDKFIQRKRKEYTDPSSSQNMSKVNNDLADIHNVMRKNIQEVLNRGEAIDRVSQMSSNLADRSKDFKWGAKKLSLQAMYQKYGPLVAIGLFIVLVLYFKFF 223
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A662XIN1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIN1_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.280e-41 Identity = 71/113 (62.83%), Postives = 93/113 (82.30%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDK IQ+KRKEY DP S NM RLNDDLADIHNIM++NI+EVLNRGE+++HVS IS L+ +++ KW +KKL + A++++YGPI A+AL V+F+++ KFF Sbjct: 104 VTTVARPYAFIKFDKFIQKKRKEYADPNSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVIFVIYIKFF 216
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: F0VZT0_9STRA (Vesicletrafficking protein SEC22b putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZT0_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.260e-40 Identity = 69/113 (61.06%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V TAARPYAFIKFDK IQRKRKEY DP S NM+RLN+DLADIHNIM+QNI+EVLNRGE+++HVS IS L+ +++ KW +KKL + A++++YGPI A+ ++ +++ KFF Sbjct: 111 VTTAARPYAFIKFDKFIQRKRKEYTDPSSSQNMSRLNNDLADIHNIMRQNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIAAVGAFILLVIYIKFF 223
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: H3GVF5_PHYRM (Uncharacterized protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GVF5_PHYRM) HSP 1 Score: 143 bits (361), Expect = 1.360e-40 Identity = 71/113 (62.83%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDK IQ+KRKEY DP S NM RLNDDLADIHNIM++NI+EVLNRGE+++HVS IS L+ +++ KW +KKL L A++++YGPI A+AL V+ +++ KFF Sbjct: 114 VTTVARPYAFIKFDKFIQKKRKEYADPNSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRLQAIYRQYGPIVAVALFVLLVIYIKFF 226
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A6V1P6Q6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6Q6_HETAK) HSP 1 Score: 143 bits (361), Expect = 1.440e-40 Identity = 69/114 (60.53%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 28 QVETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 +V+T +RPY FIKFDKVIQ KRK+Y DP+SR + RLN+DLADIH +M++NI+EVL+RGE++DHV+++S+ L +++FKW +KKL+LMAL+QKYGPIGA+AL + I++ KFF Sbjct: 114 KVDTVSRPYYFIKFDKVIQLKRKDYADPESRGALRRLNNDLADIHTVMRKNIQEVLDRGERIDHVADVSRKLVDDSKKFKWGTKKLTLMALYQKYGPIGAVALLGLTIIYVKFF 227
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Match: A0A3F2RPY3_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RPY3_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.520e-40 Identity = 70/113 (61.95%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 31 VETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLADIHNIMKQNIEEVLNRGEKLDHVSEISKTLSTQAEQFKWSSKKLSLMALWQKYGPIGAMALAVVFILWWKFF 369 V T ARPYAFIKFDK IQ+KRKEY DP S NM RLNDDLADIHNIM++NI+EVLNRGE+++HVS IS L+ +++ KW +KKL + A++++YGPI A+AL V+ +++ KFF Sbjct: 111 VTTVARPYAFIKFDKFIQKKRKEYADPNSSQNMHRLNDDLADIHNIMRKNIQEVLNRGERVEHVSRISSNLADRSKDLKWGAKKLRMQAIYRQYGPIVAVALFVLLVIYIKFF 223 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1400.2996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1400.2996.1 >prot_L-elsbetiae_contig1400.2996.1 ID=prot_L-elsbetiae_contig1400.2996.1|Name=mRNA_L-elsbetiae_contig1400.2996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MKNKNTIFPQVETAARPYAFIKFDKVIQRKRKEYLDPQSRNNMARLNDDLback to top mRNA from alignment at L-elsbetiae_contig1400:1813..4703+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1400.2996.1 ID=mRNA_L-elsbetiae_contig1400.2996.1|Name=mRNA_L-elsbetiae_contig1400.2996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2891bp|location=Sequence derived from alignment at L-elsbetiae_contig1400:1813..4703+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1400:1813..4703+ >mRNA_L-elsbetiae_contig1400.2996.1 ID=mRNA_L-elsbetiae_contig1400.2996.1|Name=mRNA_L-elsbetiae_contig1400.2996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig1400:1813..4703+ (Laminarionema elsbetiae ELsaHSoW15)back to top |