mRNA_L-elsbetiae_contig14.2991.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: D7FVR6_ECTSI (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR6_ECTSI) HSP 1 Score: 390 bits (1003), Expect = 5.610e-122 Identity = 200/267 (74.91%), Postives = 223/267 (83.52%), Query Frame = 1 Query: 181 QVNVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQL--RLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTA-SSLGWISGNKDADISV-PTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRT-----GPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAASRDRDE 954 QV VEGVFDAVA+R+VL+ARKWQGES ESY QR+EDLCYQAMSVI+KLYPWSQ R+KDY+VKPKPNGYQSLHATQLVPDVTDM+RHG SVA+EFQVRS +MHQ+AEFGLAAHWSYKES + S LGW +D + ++ P + APGKARVPDSVTSGPELVDWLHREL+ERKVFVFGPD+KIWELDKGSATAGD LGRSYMQ+FYEGA+LHDRR+ G R +AWVNGREVDASYLLKNGDVFDV AS E Sbjct: 497 QVGVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQAMSVIKKLYPWSQSPQRVKDYVVKPKPNGYQSLHATQLVPDVTDMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSSSMPSGLGW---EEDTNTTITPPHNHKAPGKARVPDSVTSGPELVDWLHRELRERKVFVFGPDRKIWELDKGSATAGDALGRSYMQKFYEGALLHDRRKIKSDAKGQGAKRKTRTAWVNGREVDASYLLKNGDVFDVAQASHQAPE 760
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A6H5KUK5_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK5_9PHAE) HSP 1 Score: 290 bits (742), Expect = 5.250e-84 Identity = 175/337 (51.93%), Postives = 196/337 (58.16%), Query Frame = 1 Query: 181 QVNVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQA----MSVIQKLYPWSQL--RLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTA-SSLGWISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDS------AWVNGREV------------------------------------------------------------------DASYLLKNGDVFDVQAASRDRDE 954 QV VEGVFDAVA+R+VL+ARKWQGES ESY QR+EDLCYQA MSVI+KLYPWSQ R+KDY+VKPKPNGYQSLHATQLVPDVTDM+RHG SVA+EFQVRS +MHQ+AEFGLAAHWSYKES + LGW+ + + I+ P T RKVFVFGPD+KIWELDKGSATAGD LGRSYMQ+FYEGA+LHDRR SG +GQ + AWVNGREV DASYLLKNGDVFDV S E Sbjct: 439 QVGVEGVFDAVAVRVVLEARKWQGESLESYTQRSEDLCYQASPCAMSVIKKLYPWSQSQQRVKDYVVKPKPNGYQSLHATQLVPDVTDMTRHGPSVAIEFQVRSKEMHQKAEFGLAAHWSYKESSSSMPGGLGWVE-DTNTTITRPHT------------------------------RKVFVFGPDRKIWELDKGSATAGDALGRSYMQKFYEGALLHDRRNI-KSGAKGQGAKRKTRTAWVNGREVCAVISITVPEISAREYIRKHLHFTLCHVLSGRFLSLPRQCPLLGDGFEDVLFFFTICECGQFVHHVDASYLLKNGDVFDVAQTSHQAPE 743
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A6H5JUF6_9PHAE (RelA_SpoT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF6_9PHAE) HSP 1 Score: 206 bits (525), Expect = 2.210e-54 Identity = 122/261 (46.74%), Postives = 156/261 (59.77%), Query Frame = 1 Query: 187 NVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQLRLKDYIVKPKPNGYQSLHATQLV---PDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSLG------WISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQ--RFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAA 936 V+GV+DAVA+R VL A++ GE+ E +++R++ LCY AMSV +K+YP + R KDY+++PKPNGYQSLH+T V P + R E QVRS MH +AE+G AAHWSYK A + G W S ++ T +P A VPDSV+SG ELV WLH EL++RKVFVFGPD IWELDK SATA +VLGRS+ R +G G +G VNG+ V Y KNGDV D+ A Sbjct: 387 GVDGVYDAVALRAVLKAKRLPGETEEDHEERSKQLCYHAMSVAKKMYPSVEGRCKDYVMRPKPNGYQSLHSTHEVSVSPAAAASAGGERRTHFELQVRSASMHHKAEYGHAAHWSYKSDDGGAKAGGVGERRSWRSYDRLKAAGARRTGIDSPATA-VPDSVSSGKELVTWLHLELRQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAA--------GGKKG--ITLVNGKAVPRHYAFKNGDVLDLDLA 636
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A836CJV0_9STRA (RelA_SpoT domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV0_9STRA) HSP 1 Score: 174 bits (441), Expect = 7.700e-43 Identity = 108/263 (41.06%), Postives = 144/263 (54.75%), Query Frame = 1 Query: 169 MMCTQVNVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQLRLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVA----VEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSLGWISGNKDADISVPTTDKGAPGKAR----VPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQA 933 M+ T+ + V DAVA+R+V AR+ G+ Y R+ LC+ AM ++++LYP + R KDY+ PK NGY+SLHAT L+P +D S G +A E Q+RS +MHQQA FG+A+H+SYK S+ W++ A + VP + G V+WLH ELQ RKVFVFGPD IW+LDK SATA DV R +QRFY A G G+ V+G +V Y L+NGD V A Sbjct: 395 MLRTRCALADVHDAVALRVVFKARRRAGDGDAEYAARSTALCHDAMRIVRRLYPTLEGRFKDYVAAPKANGYRSLHATALMPR-SDCSGGGADLAGAHPFEVQIRSFEMHQQASFGVASHFSYKGE----GSMDWLAKAAPAAXXXXXXXXXXXXASGWGFVVPAEIADGRAFVNWLHNELQSRKVFVFGPDGLIWDLDK-SATAADVARRVNIQRFYARAPR------GGGGSASSVEIMVHGHQVPRDYALRNGDAISVMA 645
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A836CGU9_9STRA (RelA_SpoT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU9_9STRA) HSP 1 Score: 171 bits (433), Expect = 7.440e-42 Identity = 107/246 (43.50%), Postives = 134/246 (54.47%), Query Frame = 1 Query: 184 VNVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQLRLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSLGWISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVF 921 V V + DAVA+R+V AR+ E+ Y+ R+E LCY+AM +++ LYP R KDYI PK NGY+SLH T L+ D E QVR+ +MHQQAE+G AAHW YK T W++ + D+ + T GAP VP G V+WLH ELQ RKV+VFGPD IW+LDK SATA DV R + FY RR G S V G +V YLL+NGD Sbjct: 402 VAVADIADAVALRVVFKARRLPAETDAQYESRSEALCYEAMRIVEGLYPTVTTRFKDYICAPKANGYRSLHTTALMQCDRDPDNVH---PFEVQVRTFEMHQQAEYGAAAHWGYKGEGSTE----WLASHADSPRA--RTIGGAPA---VPADFVDGRAFVNWLHSELQSRKVYVFGPDGLIWDLDK-SATAADVARRVSIANFYS------RRMRGRSSV----DIMVEGNQVPCDYLLRNGDAI 624
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: D7G5R6_ECTSI (GTP diphosphokinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R6_ECTSI) HSP 1 Score: 119 bits (299), Expect = 6.880e-28 Identity = 75/160 (46.88%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 481 MHQQAEFGLAAHWSYKESHRTASSLG------WISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQ--RFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAA 936 MH +AE+G AAHWSYK A + G W S ++ T +P A VPDSV+SG ELV WLH ELQ+RKVFVFGPD IWELDK SATA +VLGRS+ R +G G +G VNG+ V Y KNGDV D+ A Sbjct: 1 MHHKAEYGHAAHWSYKSDDGGAKAGGVGERRSWRSYDRLKAAGARRTGMDSPATA-VPDSVSSGKELVTWLHLELQQRKVFVFGPDNLIWELDKASATAENVLGRSHAAGIRLIDGGAAG-----GKTGI-----TLVNGKAVPRHYAFKNGDVLDLDLA 149
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: F0YFY5_AURAN (GTP diphosphokinase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFY5_AURAN) HSP 1 Score: 114 bits (285), Expect = 3.920e-23 Identity = 85/262 (32.44%), Postives = 130/262 (49.62%), Query Frame = 1 Query: 187 NVEGVFDAVAIRLVLDA-RKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQL-RLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSLGWISGNKDAD----ISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAASRDRDE 954 +++GV D VA+R+VL+ R E E++++R+ LCY + ++Q+L + R+KDYI PKPNGYQSLHA+ + R VE Q+R+ MH+ AE G+AAHW YK+ + L + AD ++ P + S E V+ + +E+ ++VFVF D +I +L +G AT D + + + A A+VNG+EV SY LKNGDV V + R + Sbjct: 237 DLDGVPDVVALRVVLEVPRDGAAEPLEAWRERSTWLCYHVLGLVQQLKGCEAVPRVKDYISFPKPNGYQSLHAS--------LRREAEDQVVEVQIRTAWMHEVAEHGMAAHWLYKDGLFSVEDLD--DDGEPADGRRGVAKPYAVSWLNSVKDWQHEIHSSREFVETIRKEVLGKRVFVFLRDGQILDLSRG-ATVLDAAFHIHTEIGLKVAT-----------------AYVNGQEVQLSYELKNGDVVSVSTSEDARPQ 470
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A7S4E6P6_9STRA (GTP diphosphokinase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6P6_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.800e-23 Identity = 86/270 (31.85%), Postives = 125/270 (46.30%), Query Frame = 1 Query: 187 NVEGVFDAVAIRLVLDA-RKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQL-RLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSLGWISGNKDADISVPTTDKGAPGKARVP------------DSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAASRDRDE 954 +++ V D VA+R+VLD R E+ E++++R LCY + +Q L + R+KDYI PKPNGYQSLHA+ L R VE Q+R+ MH+ AE+G+AAHW YK+ A S + P + P + S E V+ + RE+ ++VFVF D +I +L KG+ VL ++ G L D A +NG EV SY L NGDV ++ + R + Sbjct: 303 DLDEVPDVVAVRVVLDVPRASDQETPEAWRERGVQLCYHVLGAVQHLEDCEAVPRVKDYIAFPKPNGYQSLHASVL--------REPEDQVVEIQIRTRGMHEVAEYGMAAHWLYKDGLLEPGGEDATRRALCASASAAAVAEKRPRASAKPYALEWLNAIKDMQDIHSSREFVETIRREVLGKRVFVFLRDGRILDLSKGAT----VLDAAFSIHTDVGLHL--------------DRALINGHEVQLSYELHNGDVVSIKTSEDARPQ 546
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A812ISJ9_SYMPI (SpoT protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812ISJ9_SYMPI) HSP 1 Score: 111 bits (277), Expect = 1.570e-22 Identity = 84/269 (31.23%), Postives = 125/269 (46.47%), Query Frame = 1 Query: 187 NVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQL-RLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHR----------TASSLGWISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAASRDRDEPR 960 N++ + D +A+R+VLD ++ GES E + R CY A+++++KL WS LK+YI PKPNGYQSLH T + H V +E Q+R+ QMH+ AE+G+AAHW YK+ R + + W+ D D G R + V+ + R+ R+ FVF D I L +G TA D + + + LH A +N ++V Y L+NGD ++ S D PR Sbjct: 137 NIDNIDDIIALRVVLDIQQLAGESDEDFANRGAGYCYHALTLVRKLPNWSGGDSLKNYIAFPKPNGYQSLHVTFI--------HHDAPVPLEIQIRTRQMHEVAEYGMAAHWIYKDEQRGDGEQKKSKMRSRRVAWLESLADKD-----------GDLR-----KDAQQFVEEVLRDELGRRCFVFLRDGTILNLSRG-CTALDAAFKIHSE-----VGLH------------MQHAVINDKKVPPFYQLQNGDRVNI-VTSDDAAPPR 362
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Match: A0A399E0Q8_9DEIN (GTP pyrophosphokinase n=5 Tax=Meiothermus TaxID=65551 RepID=A0A399E0Q8_9DEIN) HSP 1 Score: 113 bits (283), Expect = 2.040e-22 Identity = 78/254 (30.71%), Postives = 118/254 (46.46%), Query Frame = 1 Query: 187 NVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQKLYPWSQLRLKDYIVKPKPNGYQSLHATQLVPDVTDMSRHGRSVAVEFQVRSTQMHQQAEFGLAAHWSYKESHRTASSL----GWISGNKDADISVPTTDKGAPGKARVPDSVTSGPELVDWLHRELQERKVFVFGPDKKIWELDKGSATAGDVLGRSYMQRFYEGAVLHDRRRTGPSGTRGQDSAWVNGREVDASYLLKNGDVFDVQAA 936 +E ++D +A+R++LD R QG+ E R + +CY + ++ L+ R+KDYI PKPNGYQSLH T + + + +E Q+R+ +MH+ AEFG+AAHW YKE L GW+ +D +S + V+ + +EL +VFVF P KI L KGS+ + + H A VNGR V SY L+NG++ ++ A Sbjct: 286 TIEQIYDLLALRVILDPR--QGQDPEETSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQSLHTTVIAVN---------GLPLEVQIRTREMHRVAEFGVAAHWLYKEGVTDPEELRRRVGWLKSIQDWQ-----------------QEYSSSRDFVEAVTKELLGDRVFVFTPKGKIINLPKGSSPV------DFAYHIHTEVGHH------------MVGAKVNGRIVPLSYELQNGEIVEILTA 493 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14.2991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14.2991.1 >prot_L-elsbetiae_contig14.2991.1 ID=prot_L-elsbetiae_contig14.2991.1|Name=mRNA_L-elsbetiae_contig14.2991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp MMCTQVNVEGVFDAVAIRLVLDARKWQGESAESYKQRTEDLCYQAMSVIQback to top mRNA from alignment at L-elsbetiae_contig14:74664..79213- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14.2991.1 ID=mRNA_L-elsbetiae_contig14.2991.1|Name=mRNA_L-elsbetiae_contig14.2991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4550bp|location=Sequence derived from alignment at L-elsbetiae_contig14:74664..79213- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14:74664..79213- >mRNA_L-elsbetiae_contig14.2991.1 ID=mRNA_L-elsbetiae_contig14.2991.1|Name=mRNA_L-elsbetiae_contig14.2991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1908bp|location=Sequence derived from alignment at L-elsbetiae_contig14:74664..79213- (Laminarionema elsbetiae ELsaHSoW15)back to top |