mRNA_L-elsbetiae_contig1397.2969.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1397.2969.1 vs. uniprot
Match: D8LBZ1_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ1_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 2.170e-121 Identity = 202/238 (84.87%), Postives = 214/238 (89.92%), Query Frame = 1 Query: 1 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGARWSEVQSDARIVADTADAILVPVLASPSISRSVCAVKLLANSAFSHLCLGNSEDALRAVRRFSSILKEFPGILRFPPWRHCFHWMAGMLESAGLRDLYDGLKKGLDSINMKSMQNLPEFGDGAHDIMCQCSHFRCQATHRALAEHAKLDPFGAFHIPPHCPHFGTAATAXXXXXXXXCSSTAFRAGREASEWAAKLSTVDSRSS 714 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAG W+E++ DARIVA+TADAILVPVLASPSISRSVCAVKLLANSAFSHLCLGN+E A+RAVRRFS+ILKEFPGI+RFPPWRHCFHWMAGMLESAGLRDLYDGL+ GL +INMKSM+NLPEFG GAHDIMC+CSHFRCQATHRALAEHAKLDPFG FHIP HCP FG AA A ST FRA REASEWAAKLSTVDSRSS Sbjct: 610 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGKPWAEIKEDARIVANTADAILVPVLASPSISRSVCAVKLLANSAFSHLCLGNAEYAMRAVRRFSAILKEFPGIVRFPPWRHCFHWMAGMLESAGLRDLYDGLRDGLATINMKSMRNLPEFGKGAHDIMCKCSHFRCQATHRALAEHAKLDPFGFFHIPHHCPQFGPAAEAAAASGG---KSTTFRAVREASEWAAKLSTVDSRSS 844
BLAST of mRNA_L-elsbetiae_contig1397.2969.1 vs. uniprot
Match: A0A6H5JQB9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQB9_9PHAE) HSP 1 Score: 393 bits (1010), Expect = 5.090e-119 Identity = 199/240 (82.92%), Postives = 214/240 (89.17%), Query Frame = 1 Query: 1 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGARWSEVQSDARIVADTADAILVPVLASPSISRSVCAVKLLANSAFSHLCLGNSEDALRAVRRFSSILKEFPGILR---FPPWRHCFHWMAGMLESAGLRDLYDGLKKGLDSINMKSMQNLPEFGDGAHDIMCQCSHFRCQATHRALAEHAKLDPFGAFHIPPHCPHFGTAATAXXXXXXXXCSSTAFRAGREASEWAAKLSTVDSRS 711 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAG W+E++ DAR VA+TADAILVPVLASP+ISRSVCAVKLLANSAFSHLCLGN+E A+RAVRRFS+IL+EFPGI+R FPPWRHCFHWMAGMLESAGLRDLYDGL+ GL +INMKSM+NLPEFG GAHDIMC+CSHFRCQATHRALAEHAKLDPFG+FHIP HCP FG AA A ST FRAGREASEWAAKLSTVDSRS Sbjct: 575 TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGKPWAEIKEDARDVANTADAILVPVLASPTISRSVCAVKLLANSAFSHLCLGNAEAAMRAVRRFSAILEEFPGIVRRTGFPPWRHCFHWMAGMLESAGLRDLYDGLRDGLATINMKSMRNLPEFGKGAHDIMCKCSHFRCQATHRALAEHAKLDPFGSFHIPHHCPQFGPAAEAAAASGG---KSTTFRAGREASEWAAKLSTVDSRS 811
BLAST of mRNA_L-elsbetiae_contig1397.2969.1 vs. uniprot
Match: A0A835YN27_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN27_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.990e-8 Identity = 41/99 (41.41%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 259 EDALRAVRRFSSILKEFPGILRFPPWRHCFHWMAGMLESAGLRD-------LYDGLKKGLDSINMKSMQNLPEFGDGAHDIMCQCSHFRCQATHRALAE 534 E A +R +++E PG+LRFP W H H+ A +L SAG+RD LY+GL GLD + + LPE D MCQC F C HRA+A+ Sbjct: 504 EGAQEGLRHMLRLVREAPGLLRFPVWPHTAHFCAALLLSAGMRDELDELTRLYNGL--GLDGGHSR----LPE-DDVGRAAMCQCPQFCCAGVHRAVAD 595
BLAST of mRNA_L-elsbetiae_contig1397.2969.1 vs. uniprot
Match: A0A835ZDD0_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD0_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.910e-6 Identity = 39/116 (33.62%), Postives = 56/116 (48.28%), Query Frame = 1 Query: 193 RSVCAVKLLANSAFSHLCLGNSEDALRAVRRFSSILKEFPGILRFPPWRHCFHWMAGMLESAGLRDLYDGLKKGLDSINMKS-MQNLPEFGDGAHDI-MCQCSHFRCQATHRALAE 534 R VC ++ +A + L L + L + R +L PG+L P RH HW+ +L SAGL Y L + + +++ S + LPE MC CSH RC A R LA+ Sbjct: 514 RLVCGDEVGGAAAAASLSLSAEDACLALLLRMKRMLCHTPGLLHTPSRRHNVHWLGALLLSAGLIADYSDLARTYNELSLASGLDTLPEAPTAEDKTRMCLCSHPRCAAVQRLLAD 629 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1397.2969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1397.2969.1 >prot_L-elsbetiae_contig1397.2969.1 ID=prot_L-elsbetiae_contig1397.2969.1|Name=mRNA_L-elsbetiae_contig1397.2969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=699bp TNQVLFVGDTRILEVSMGVDCSCISVMCKAVAGARWSEVQSDARIVADTAback to top mRNA from alignment at L-elsbetiae_contig1397:12588..20709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1397.2969.1 ID=mRNA_L-elsbetiae_contig1397.2969.1|Name=mRNA_L-elsbetiae_contig1397.2969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8122bp|location=Sequence derived from alignment at L-elsbetiae_contig1397:12588..20709- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1397:12588..20709- >mRNA_L-elsbetiae_contig1397.2969.1 ID=mRNA_L-elsbetiae_contig1397.2969.1|Name=mRNA_L-elsbetiae_contig1397.2969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4194bp|location=Sequence derived from alignment at L-elsbetiae_contig1397:12588..20709- (Laminarionema elsbetiae ELsaHSoW15)back to top |