mRNA_L-elsbetiae_contig1396.2965.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1396.2965.1
Unique NamemRNA_L-elsbetiae_contig1396.2965.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 2.230e-143
Identity = 216/270 (80.00%), Postives = 235/270 (87.04%), Query Frame = 1 
Query:    1 QAEADSVAFGGDGVEGRAMDRASQAEAKYREALEEALRAAREHGNASPQAVAAWDIVDEIEASNNSIAWRPALDQACST--EGDDMELCIEYNKDLERLEEILSPPATAPEEEPRYAMVLSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            +AEA  VAFGG   EGRAMDRASQAE+KYREALEEALRAAREHG++SPQAVAAWD+VDEIEASNNSIAWRPALDQACS   EGDDMELC+EYNKDL+RL+EIL P  TA EEE R    + EIVPV VPNL+TKF PS V+N +IASDS G  THYTKLIGE D+V+YEHVRG GRMP+AKGFLRAGPRASLHFKP EVRAAVVTCGGLCPGLNSVIHHLVLTL  IYDAEKV GIVGGFAGFWDEN PP +++VK VE +QHEGGSILG
Sbjct:   67 EAEATGVAFGG---EGRAMDRASQAESKYREALEEALRAAREHGDSSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGDDMELCMEYNKDLDRLKEILQPSDTAEEEE-RERFTIEEIVPVPVPNLKTKFKPSGVANLDIASDSLGSVTHYTKLIGEQDIVLYEHVRGPGRMPAAKGFLRAGPRASLHFKPTEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYDAEKVFGIVGGFAGFWDENHPPREMSVKDVELVQHEGGSILG 332
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE)

HSP 1 Score: 413 bits (1061), Expect = 3.110e-138
Identity = 212/269 (78.81%), Postives = 233/269 (86.62%), Query Frame = 1 
Query:    4 AEADSVAFGGDGVEGRAMDRASQAEAKYREALEEALRAAREHGNASPQAVAAWDIVDEIEASNNSIAWRPALDQACST--EGDDMELCIEYNKDLERLEEILSPPATAPEEEPRYAMVLSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            AEA  VAFGGDG   RAMDRA+QAE+KYREALEEALRAAREHG+ SPQAVAAWD+VDEIEASNNSIAWRPALDQACS   EGDDMELC+EYNKDL+RL+EIL P + A EEE +    + EIVPV VPNL+TKF PS V+N +IASDS G  THYTKLIGE D+V+Y+HVRG GRMP+AKGFLRAGPRASLHFKP+EVRAAVVTCGGLCPGLNSVIHHLVLTL  IY AEKV GIVGGFAGFWDEN PP +++VK VE IQHEGGSILG
Sbjct:  105 AEATGVAFGGDG---RAMDRAAQAESKYREALEEALRAAREHGDFSPQAVAAWDVVDEIEASNNSIAWRPALDQACSVAGEGDDMELCMEYNKDLDRLKEILEP-SHAAEEEEQERFTIEEIVPVPVPNLKTKFKPSGVANLDIASDSLGKVTHYTKLIGEKDIVLYDHVRGPGRMPAAKGFLRAGPRASLHFKPEEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYGAEKVFGIVGGFAGFWDENHPPKEMSVKDVELIQHEGGSILG 369
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A6H5K8I7_9PHAE (PFK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8I7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.060e-51
Identity = 88/146 (60.27%), Postives = 105/146 (71.92%), Query Frame = 1 
Query:  376 VPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIY---EHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            VPNL  KFP S   N EI  ++QG  T Y KL+G  D +IY   +HVR   + P+AK FLRAGPR  LHF P EVR A+VTCGGLCPGLNSV+HHLV T+L  Y A+KV GI GGFAGF+DE  P V+LT +GVE +QH+ GS+LG
Sbjct:    4 VPNLNVKFPSSLAPNREITVNTQGSPTCYNKLLGPRDCIIYGECQHVRDKNKPPTAKAFLRAGPRPELHFNPTEVRGAIVTCGGLCPGLNSVVHHLVETMLVTYKADKVFGIRGGFAGFYDEATPAVELTSEGVEFLQHQPGSVLG 149
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A835ZIU1_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 6.030e-47
Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 1 
Query:  352 LSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTV-KGVERIQHEGGSILG 804
            L  ++  +VPNL  + P + V+N EI  +S GG+T Y KL+G++D +IYEHVR   + P A+ FLRAGPRA LHF P  V A +VTCG LCPGLNSVIHHLV TL   Y+A K+ GI GG+ GFWD  +PP+ L   K +E +Q   GSILG
Sbjct:   43 LETVMLCQVPNLALRMPTAGVANHEIVKNSSGGSTFYNKLLGDEDCIIYEHVRDKTKAPVARAFLRAGPRAKLHFDPTTVNACIVTCGLLCPGLNSVIHHLVDTLKNNYNAGKIYGIRGGWGGFWDPEKPPIQLCQSKDLEFLQSRAGSILG 194
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: H6WB78_VAULI (Pyrophosphate-dependant phosphofructokinase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB78_VAULI)

HSP 1 Score: 163 bits (412), Expect = 2.850e-43
Identity = 75/151 (49.67%), Postives = 107/151 (70.86%), Query Frame = 1 
Query:  352 LSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            L +I   +V NL   F  S++ N  +  +S G ++++ +L+GE D V+++ + G  R P  + FLRAGPR  LHF+PK   AA+VTCGGLCPGLNSVIHHL  TL++ Y A++V+GI GGFAGF D+N  P++LT+  V R+QH+GG++LG
Sbjct:   56 LGDIYISKVQNLSDDFSSSEIKNDLMVQESSGESSYWNRLVGELDCVLFDVICGPDRPPQKQAFLRAGPRPVLHFEPKNTVAAIVTCGGLCPGLNSVIHHLTETLVRNYKAKRVIGIRGGFAGFVDKNLEPIELTLIKVNRLQHQGGTLLG 206
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A835YV15_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV15_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.910e-43
Identity = 87/181 (48.07%), Postives = 112/181 (61.88%), Query Frame = 1 
Query:  298 ILSPPATAPEEEPRYAM-------VLSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDL-----TVKGVERIQHEGGSILG 804
            +L P  +  +EEP   +       VL+ I+  +VP L  K P + V N EI S++ G  T+Y +L G+ + +I EHVR   + P AK FLRAGPRA LHF P +V AAVVTCG LCPGLNSVIHHL  TL  IY A+KV G+ GG+ GF + + P ++L      V G E +QH  GSILG
Sbjct:   18 MLGPEGSILDEEPLLGVGRVKTNFVLTTIMLCQVPRLSAKLPSAGVPNLEIKSNTSGQPTYYNRLTGDTECIIDEHVRDERKAPVAKAFLRAGPRAKLHFDPVKVNAAVVTCGTLCPGLNSVIHHLRDTLTTIYGAQKVYGVRGGWGGFHNPHTPVIELHDDALDVSGRESLQHRAGSILG 198
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A836C7Q7_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q7_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.120e-40
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 1 
Query:  337 RYAMVLSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            RYA    ++    VPNL   FPP  + N  +   S G  + + +L+G  D ++ EHV G G+    K  LRAGPR  LHF PKE  AA+VTCGGLCPGLNSVIH++  TLL+ Y A +V+GI GGF GF+D +  P++LT+  V  +Q++GG++LG
Sbjct:   10 RYAF--DKVYMCEVPNLNEAFPPCNMRNDCMTQQSTGEPSLWNRLLGPRDCILLEHVCGPGKARKLKALLRAGPRPLLHFPPKETVAAIVTCGGLCPGLNSVIHYVTETLLQNYGARRVIGIKGGFGGFYDADLEPLELTMDAVNGLQNQGGTLLG 163
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A835ZA90_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA90_9STRA)

HSP 1 Score: 151 bits (382), Expect = 7.800e-39
Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = 1 
Query:  358 EIVPVRVPNLRTKFPPSKVSNFEIASDSQGGA-THYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            +I    VP L   FP   + N  +     GG+   + +L+G DD VI + + G  R    K  LRAGPR  LHF P++  AA+VTCGGLCPGLNSVIHHL  TL+K Y A++V+G+ GGFAGF++    P+DLTV  V+R+QH+GG++LG
Sbjct:   76 QIYLAEVPCLSDYFPSMNIRNDMMVQALSGGSPAFWNRLLGPDDCVIIDPICGPDRPGHKKALLRAGPRPLLHFDPQKTVAAIVTCGGLCPGLNSVIHHLTETLVKNYSAQRVIGVRGGFAGFYNRQLTPLDLTVSRVDRLQHQGGTLLG 225
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BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: A0A7S2JWY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWY3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 7.160e-36
Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 1 
Query:  454 THYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSIL 801
            T Y K+IGE D +I + VR       ++ ++RAGPR  LHF P+EVRAA+VTCGGLCPGLN+V+  L   L  +Y A KV GI GG+ GF+D   PP+DLT + VE I H+GG+ L
Sbjct:  132 TPYNKVIGEKDAIIADPVRKPNGTTVSRAYIRAGPREKLHFNPREVRAAIVTCGGLCPGLNNVVRSLTNALFHLYGARKVTGIAGGYKGFYDPEYPPIDLTPEVVEFIHHQGGTFL 247
[Close]
BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Match: K8Z818_NANGC (6-phosphofructo-2-kinase / fructose-2,6-bisphosphatase (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z818_NANGC)

HSP 1 Score: 140 bits (354), Expect = 7.410e-35
Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 1 
Query:  370 VRVPNLRTKFPPSKVSNF-EIASDSQGGATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAAVVTCGGLCPGLNSVIHHLVLTLLKIYDAEK-VMGIVGGFAGFWDENQPPVDLTVKGVERIQHEGGSILG 804
            + +PNL   F  + V N  +++  + G +  Y KL+G  D +I + VR  G  P  K ++RAGPR  LHF+P++VRAA+VTCGGLCPGLN+VI  LV +L  +Y A+  V GI GGF+GF D ++ P+ LT + V++I HEGG+ILG
Sbjct:   91 LEIPNLGKTFKGAHVQNLSQMSGTTSGESIAYNKLLGHQDGIIADIVRREGLPPETKVYVRAGPRKELHFEPEKVRAAIVTCGGLCPGLNNVIRELVNSLFHLYRAQSGVYGIRGGFSGFHDAHRLPIMLTPELVDQIHHEGGTILG 237
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1396.2965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G165_ECTSI2.230e-14380.00Pyrophosphate-dependent phosphofructose kinase n=1... [more]
A0A6H5KDC4_9PHAE3.110e-13878.81PFK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K8I7_9PHAE1.060e-5160.27PFK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZIU1_9STRA6.030e-4753.95Pyrophosphate-dependent phosphofructose kinase n=1... [more]
H6WB78_VAULI2.850e-4349.67Pyrophosphate-dependant phosphofructokinase n=1 Ta... [more]
A0A835YV15_9STRA7.910e-4348.07Pyrophosphate-dependent phosphofructose kinase n=1... [more]
A0A836C7Q7_9STRA1.120e-4047.44Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]
A0A835ZA90_9STRA7.800e-3948.67Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]
A0A7S2JWY3_9STRA7.160e-3652.59Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K8Z818_NANGC7.410e-3547.626-phosphofructo-2-kinase / fructose-2,6-bisphospha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1396contigL-elsbetiae_contig1396:18963..26132 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score426.0
Seed ortholog evalue1.3e-116
Seed eggNOG ortholog2880.D7G165
Preferred namepfk
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
EggNOG free text desc.6-phosphofructokinase activity
EggNOG OGsCOG0205@1,KOG2440@2759
EC2.7.1.11,3.4.24.64
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Ec32 ortholog description6-phosphofructokinase
Ec32 orthologEc-22_000070.1
Exons7
Model size807
Cds size807
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.3848314-CDS-L-elsbetiae_contig1396:18962..191451622815549.3848314-CDS-L-elsbetiae_contig1396:18962..19145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 18963..19145 +
1691682953.240611-CDS-L-elsbetiae_contig1396:18962..191451691682953.240611-CDS-L-elsbetiae_contig1396:18962..19145Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 18963..19145 +
1622815549.398685-CDS-L-elsbetiae_contig1396:20191..202521622815549.398685-CDS-L-elsbetiae_contig1396:20191..20252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 20192..20252 +
1691682953.254518-CDS-L-elsbetiae_contig1396:20191..202521691682953.254518-CDS-L-elsbetiae_contig1396:20191..20252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 20192..20252 +
1622815549.4133961-CDS-L-elsbetiae_contig1396:20733..208331622815549.4133961-CDS-L-elsbetiae_contig1396:20733..20833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 20734..20833 +
1691682953.2682436-CDS-L-elsbetiae_contig1396:20733..208331691682953.2682436-CDS-L-elsbetiae_contig1396:20733..20833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 20734..20833 +
1622815549.4254448-CDS-L-elsbetiae_contig1396:21979..221341622815549.4254448-CDS-L-elsbetiae_contig1396:21979..22134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 21980..22134 +
1691682953.276989-CDS-L-elsbetiae_contig1396:21979..221341691682953.276989-CDS-L-elsbetiae_contig1396:21979..22134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 21980..22134 +
1622815549.4363046-CDS-L-elsbetiae_contig1396:22570..226241622815549.4363046-CDS-L-elsbetiae_contig1396:22570..22624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 22571..22624 +
1691682953.2860074-CDS-L-elsbetiae_contig1396:22570..226241691682953.2860074-CDS-L-elsbetiae_contig1396:22570..22624Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 22571..22624 +
1622815549.4473352-CDS-L-elsbetiae_contig1396:24954..250911622815549.4473352-CDS-L-elsbetiae_contig1396:24954..25091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 24955..25091 +
1691682953.2949564-CDS-L-elsbetiae_contig1396:24954..250911691682953.2949564-CDS-L-elsbetiae_contig1396:24954..25091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 24955..25091 +
1622815549.4598765-CDS-L-elsbetiae_contig1396:26015..261321622815549.4598765-CDS-L-elsbetiae_contig1396:26015..26132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 26016..26132 +
1691682953.3038754-CDS-L-elsbetiae_contig1396:26015..261321691682953.3038754-CDS-L-elsbetiae_contig1396:26015..26132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1396 26016..26132 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1396.2965.1prot_L-elsbetiae_contig1396.2965.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1396 18963..26132 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1396.2965.1

>prot_L-elsbetiae_contig1396.2965.1 ID=prot_L-elsbetiae_contig1396.2965.1|Name=mRNA_L-elsbetiae_contig1396.2965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
QAEADSVAFGGDGVEGRAMDRASQAEAKYREALEEALRAAREHGNASPQA
VAAWDIVDEIEASNNSIAWRPALDQACSTEGDDMELCIEYNKDLERLEEI
LSPPATAPEEEPRYAMVLSEIVPVRVPNLRTKFPPSKVSNFEIASDSQGG
ATHYTKLIGEDDVVIYEHVRGAGRMPSAKGFLRAGPRASLHFKPKEVRAA
VVTCGGLCPGLNSVIHHLVLTLLKIYDAEKVMGIVGGFAGFWDENQPPVD
LTVKGVERIQHEGGSILG*
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mRNA from alignment at L-elsbetiae_contig1396:18963..26132+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1396.2965.1 ID=mRNA_L-elsbetiae_contig1396.2965.1|Name=mRNA_L-elsbetiae_contig1396.2965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7170bp|location=Sequence derived from alignment at L-elsbetiae_contig1396:18963..26132+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGGCGGATAGCGTGGCGTTCGGAGGAGACGGGGTGGAGGGGCG
AGCGATGGACCGCGCCTCGCAAGCGGAGGCCAAGTACCGGGAAGCCCTGG
AGGAGGCGTTACGGGCAGCCAGGGAGCATGGGAACGCGTCCCCGCAGGCG
GTGGCTGCGTGGGACATTGTCGACGAGATTGAGGTGATGTTGGGGGGGGG
GGAGAAACAGGGCCTGTCGGTTGTGTCGTTGCGCTGGCTGGAGCAAAAGA
GGGCTGTGTTCCGTCTTGATCGTTGGGTATATGGGGCTGTGGCAACATTG
TTCGTGATTTCTCCATCGTGGTGAGTGATGATGTGGTTTGTTGTCAGTTT
GGGGGCACCGTCACTGGAGAGCCTTTCCGCCGAGGCGTCGCCTGCTGTGT
TCAATCGCGAAGAGAACTCACGAGTCCTATTCGTTTGGCACGCCGGTAAA
GACGACGAGAGTAATTGCTTGCGTTGACACCGCCGTAGAAACGATCGAGG
CGAAAACCCACCAAGCCACGGCGCGGAGACTTTTTGTTTTGTTTCAAGAA
CCCATTTATTTTTCCTCTTCGCTCGTCTGTCTGCCCTACAAGAGGAAGGG
GACGAAGCAATCGACTCCGGCCCTCTGTCAGCCCCTGCGTAATGAGCGAG
TAGTTTACTATACCCCGGTTGTCCGTCTCAGTTGAGGTCATCGCGCTGGC
CCCATTACCGTAGGTGACACAGGATACCACACCCCCTGGGCGGGATTTTA
GAGCCCCTTTGCTCCGTAACGAAGAGGGTGCCAGCACCAAACGACATTTT
TTCGGACAGCCCTCGCCTAGATCTTTCCAACGCCACCCCCTTTCGGCACT
GGCGCTCTTCTTGCTGGGGAGGAATCGAGCTTTGAAAATATGTCCAGGGG
GTGTGGTATCTTGTGTCACCTATACGGTACGTGGTCGTTTTGGTTATTAT
CCTGCGTGCTTCTCTCGAGCGAGTCGCTTGACTGCTCTCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCTCTCCCCCTCCCC
CCTCCCTCTTCTNNNNNNNNNNGCCAGCCGGTAGGTCGGCTGTTTTTGTT
TTTGCCGCCGCGCCGCTCGCGCCGTGCCGCGCGCTGTGCCCCCCCCCCCC
CCCCCCCCCCCCCCCATCCTTATGTGCTGCGTATCATTCCGTTATCTCGC
CTCTCTTTTGCCGTCGAGCGGCTGGAAAGGCGTCCAACAACTCCATCGCC
TGGAGACCGGCTTTAGATCAGGCCTGCTCTACCGAGGGGGGTGAGAACAA
TTGACACCACTTAAAAAAGTTTTTGCACCCCAACGCAGAATTGACTCGTT
TGTGCTATTTAGCCGTGAGGCTGAGAGTTGAAGGTTTGCATCGTGGATTA
CCGCATACACGGCCCCCCGAAAGGCGTACCATGGCTGCGGATGCGGAGAG
GGCAGCGAACTATCCCGAGACGTTTTAAAGCTTATGTATGTAGAACGACA
GCGGTGTACATGTGATATTTGAGCTGTTTTTCACTCCTTGCATTCTGTCA
CTTTTGTTACAACGTTCAGGGTGCGTGTTGCTCTGCATATATATACATCC
TTAGATATGTCAGGACGGGGGGCGCCGTTGTGGAGCACGCGTGGTGGTGG
TACACGTGTAATGTACCCATCTAGCTACCAGCATCGTGTGTGTCCAACCC
CATCCCATCGGAGCGTCTGTCCAATCCCATCACCACGCTGGCCGCCCTGC
TGTCCGCACGCACGCCCCCAGACGACATGGAGCTGTGCATAGAGTACAAC
AAGGACCTGGAGCGCCTCGAAGAGATCCTTAGCCCGCCCGCCACGGCCCC
TGAGGAAGAACCAAGGTACGCGTTTGTTGCCGGCCGATCTACTCTCATGC
CCTCCTGCGGAGGGAGTTCCGTGAATTAGTTAATTATTGCCGAGGTGTGG
TGTGCAAAACCCCGCTCCCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCAAGTTTTCTTTTGGTGGGGGGGGGGTGGGTGCGTGTGCGGGTGTTGTT
ATTNNNNNNNNNNCCCCGCCGGGGGGGGGATCCGTGGATTATTGTATATT
TTCCGCGGGGGGGGGTGCAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCAGTTACACGGAAGGCTATTTTTTTAGGGGTCGGGGCTATGTATCTGCA
TTGGGCTGTTCATATGTACCTTCGATGGTCGTGTACGCAAAAGATGCCCG
CCCGCAAGGACTCGTCGGCTGTTGTCCAGATGAGAGGGGCTGGGGGAACA
AGGGGAACCGAGAAAACGGCGTGAGATGGCCGGATCTTATGGGAACGAAA
TTTAGGCCCAAACGAAATTTTGGGGGGGCTCACAGAAAGACGAACGAAAT
GGAAAAAACACCACATCAACGCCGCTGCCTCGGTCCATAGCCAACGGATT
GCCACCGGACCAAGAGGGATGTATGCTCCGCACCTCTGAGCGTCTCCCCA
ACTATTTTGTTTGTGGCAGGGGTCGCGTTTCTGTCGCGGCGAGGTCTAAA
ACATTCAATCCCCCCCCCTCGTCCCCTTGGGAGTACGGTAGTCACGTACC
CCCCGTCTTTTGTCTCGCGCGCGGTCCTTCGTGCCACCCTCCCTCGGCCG
TGGATTGGTTCCAACAGAGCACTGACACACATATACAGATTGGGTTTTCC
CTAGGTGCAACGTATGTGAGCTGTTGGTCAAGCCACGCACTGGAACCAGG
CTTTTGAGGAGACTTTTCAGGCTGGCGACGCACGTGGCGACGTCCGCCAG
TTCTGGCCCTTTAGTCTTGACACGGCGGCAGCTCATAGTGTTGCGCAACT
CGAACAGCAGTCAACACTAATGCTCGCTTGCTTCACCCCTGATTGGCTCC
AACTCACAGCATTGGCACACACGCCCACACGTATGCATGCCCAAATGTGA
CAACACACAAACGCACGCACACGTAAATACTAAATACATACTCCATACCC
GCACGCGACGTGCACAGGATGGTTCTGAGCGAAATTGTGCCGGTTCGAGT
GCCGAACCTCCGAACCAAGTTCCCGCCTTCCAAGGTCTCCAACTTCGAGA
TCGCGTCGGACAGCCAGGGAGGCGCCACGCACTACACCAAGCTCATCGGG
GAAGACGATGTTGTGATATACGGTGGGTGAGGGAGTTTCTCTTCTCCGTG
TGCCCCCCCGTGCCTGGTGTAATGTAATGTAGGTCCTCAGGCCGCGGAAA
CCCGGCTCTGTACTCTGCACCCTGCTGCCGTGTTGCAGGGGGGTTGCTTC
TTGGGTATTGCGGCGAAAGAAAGCGAAATGTGGAGAGATGTTACTGCGCG
ACAGAGGAAATAAAGCGGTTTGTGCCTCTTACTTGATTTTTATTTTTATT
TTTATTTTTATTTTAATTTTCATGCTCATTTTCATTTTCATTTTCATTTT
CATTTTCGTTTTTTTTGTGCGTGCTGTTTTACGGCGGTTCTGGGTGGGGG
TCACACGGCCGGGCGGCCGGCTGGGCTTACCTACCTCGGGTAATGCTGGC
ATGTGGTCAAAATCGACGTTTGTTTCCTCTTGGCTCCCGACACCCGGCTC
GGTTGCAGAGCACGTTCGGGGAGCGGGGAGGATGCCGTCAGCCAAGGGTT
TTCTTCGCGCAGGTGAGAACAATACATATATGCTGCTGTACGCTGTTCTT
GGGATCACGAGGCCCCCATGGATCTTTTTGGACTAATCAGTGCTGTCACA
GTTGGGGGGCCGGCAGATATTTACCTGCTTCGGGGTCGACAGATGTACCA
CGGTTTGCAGAACTCCTCCACAAACCATAGGAATACAGAGTTCGCCATTT
CAGCCGAGTGCTTGGCGGAGATATCTCGGTCTAGGAGGCTTGAACCCAAG
TAGAGACTTCAAGGCTGGTTGCTACAAGTGATGCGCGAGAGGAAACGCCC
TTTGCCTGGTGGCGAAAGTTGGCATGTTTATTTAAATCAGCCCCCGCGAA
GTTGCATACCAGAGAATGTGTGCGTATGACACACAAGATAACACCCCCAC
AGAGAATAACACCCCCCCTTCCTCTTGGAAATAGTGGGAAAACACGCTCG
CACGCGATCACCGTTTTCTTGCGCTACCGACCTTGAACCCACCAACGGAT
GGGTTCCGCGGAAAGATGCTGACCAGGGAGGTTGCCTCCGCTACTTTTTT
TCGGTCATAGCCTGGCTTGTTTATTACACGACGTCACCAAAACACACGAG
CTTCAGCCCGTGAGGGCGGAGGAGTTGTTTGTCTTTTGACCCTCGCATCC
AGCACAGACCATGCCAAAAGGAAGGTAAACCCAACCCAGCACCACCACAG
TGAAGTGGTTCTATGGATTCTCGTCGGGTTTGGTGGCAAAAGTTGGCTAG
GTGGAGCTGCAGCTGTGTCTGGTGTGCCTGCCGCGTACCCGGGGATGCTG
GCGGAATGCTCCCACATGCGAAAAACGCCTGATATTCTCCGCAGGTATCT
CTGGAATATCGTTTTTTACCTCTCGCGCCCCACACACCTGTACGCCCCCT
AGTTTTTTCGGTGATATCGATAGAGATAGATCTAAGCTACTGGAGCGTGC
CTTCATAACGCCAAACGGTGCACTACAGCGTTCGCTGCATGAGAAAAAGT
CGACATATTCTATCTGCCGGCCCCCGAGCGTAACAAAACTGTAATAGAGA
GCTAATGTGAGAAGGAAAAAAAAACAACAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCATAGTCTAGGTGTGGTGTTTT
ATTTAGTAATTCATTTTTGGGTTTGGGGACAACTCGTGTCTCTTCCACAA
TGTTTTGAAAGAAAATCAGTCGACCTCAAGGCGGAACCAAACCCACATTA
GAGACGGGCGGCCGGCCCCCTGTGGGGGTTCAGCCGGGGTTCAACCGGTA
TTCCATTTAGGGACGTGATATAGGTTGGTCCGGCCGAGTAGAACAGCGCC
TAAAATGTCCGAATAGTTCAACATCTCCGCCAGGTGAACCAGCATGTTTG
TTTGAGGTCCTACTTCTCGGGTCCGTGTCGGCTGATCCCGATTATCTTTT
TTTCAAGTATTTGTAAGAATATCGGGCTTCAAGTATGTATGTACACACCG
TAGGTGACACAAGATACCACCCCCCCCCCCCTGGACGGACTGCCTTTGCG
AGAAAAAACGGAGAATATTGGTTTATATATGAAATAGAGTAGTAGGGGTT
CCGTAACCCTAACCCTAACCCTAACCCTAACCACCGACCCCCCAAACATT
CCCCAATTCCATACTTTATCCCATATGTTTCGCTGAACAAAAACCTGCGT
AGACTACCCCCCTGGGCAGACCTTCAAGCTCGATTACTCCGTAACGAAGA
GGGTGAGAACACCAAACGGCACATTTTCGGACAGGTCTTCATGGGATCTT
TCCAACGCCGCCACCCCATTTCGGCACTGGCACTCACTCTTGTTGCTGGG
GAGGAATCGAGCTTTGAAAATCTGTCCAGGGGGGGGTGGTATCTTGTGTC
ACCTACGGTATATGTACGATCGATGATGTGTGCACGCGAAAAGCACCCGC
CCGGCTACCGTATATGACACAAGATAACACACCCCCTGGACCGATTTTCA
AAGCTCAAGTACTCGACAGCGAGAAGATTGTCAGTCCCGAAAAGGGCGGC
GTTGGAAAGATCTCGTCAACAGCTGTTCCGAAAACGTGTCGTTTGATGCT
GGCATCCTGTTCGTCACGGAGTAACCGAGCTTTGATAATCGGTCCAGGGG
GTGTGTTATCTTGCGTCGTATACGGTAGGAAACCAAAACCTCAGACCTGT
CTCGCCGTTTTGTCTTGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TGGTGGTTCTCTTTTTGGCTCTCCTGTTGTTCTCTTTTTGGTTCTTCTTT
GGTTCTTCTTTGGTTCTGCTCCTTTTCGGTTCTCTGTTTTAGGGCCGCGA
GCGTCGCTTCATTTCAAGCCCAAGGAGGTTCGCGCGGCCGTGGTGACCTG
CGGGGGGCTTTGCCCGGGACTCAACAGCGTCATCCACCACCTCGTGCTGA
CGCTCTTGAAGATCTACGACGCTGAGAAGGTGAACGAAGAATGGAAAATC
ACAAATCGCGCTTAAATATGTTATTTACCTGGCAGGTACGCTTTTGAAGA
CCTATGGTACGACGCTGAAGAGGTGAATTGGCGAATGAAGAATCACGAAT
CGTGCTTCAATACAAACCCCCTTGAACTTCTCGATGATATGGTGCCGGGG
GTTCTTTTCCATGAGCAACGCTTGGGGGGTAGGTGCGCTATGTAGTACCA
GTACAGCGCTGGCACGGCTGTGTGCCACCAAATACGTAGTACGTACAAAT
GGTTGGCGTGTTTTAAGCGTGCGACGCTAGTTAGAATGACAGCAGCATCT
TCGTTGGTGAATAATGTGGTGTCCCCTCATGATGCATTTTCTTGGGAGTT
ACCGCATCCTTTCCTCCTATAGTAATCGTATATATGCACCATGGGCTGCT
TGTGGCCTCTTTGATGCTCGGTTGGGAAGGAGTCATGTAGCTGTTGATTT
TTGTCCACATGCTCGTCCCGAGGGAAATTCAGTCGTGCCGGCAACGAAAG
CATGCTAACGATAGTTTAGCCCCCTTACATGCCTTCTTGGCGTTATTCCG
GGCGTACCAGATGTGGTACCGTCCGTGCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCTTTCTCCTCCCCGCCCGCGCTGGCCCGCTCGCTTGCTG
TTTGTTAGAGCGATTAGACGTTCCCNNNNNNNNNNGGACGACGGTGCAGA
ATAGTTGTGCCCCCGCTCCCGCCTTTTTGTCGTTTTTCGTGGGGGGGGGT
GGGGGGTGCGGGCCGCGCCCCCCCCCCCCCCCCCCCCCGCTTGTCACTTT
TCGTTCCCCGCTGTCGCGGTGGTGCCATGTACCGTTTGGCTTGTGAAAGG
AGTTAACCCCTGTAACCCTCGAACCGTGGCTGCTGTGTACCCGTGCGCCT
CAGGTGATGGGCATCGTGGGGGGCTTCGCCGGGTTCTGGGACGAGAACCA
GCCCCCTGTGGACCTGACCGTCAAGGGGGTGGAGCGGATACAGCACGAGG
GCGGCTCCATATTAGGGTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1396:18963..26132+

>mRNA_L-elsbetiae_contig1396.2965.1 ID=mRNA_L-elsbetiae_contig1396.2965.1|Name=mRNA_L-elsbetiae_contig1396.2965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig1396:18963..26132+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGCGGAGGCGGATAGCGTGGCGTTCGGAGGAGACGGGGTGGAGGGGCG
AGCGATGGACCGCGCCTCGCAAGCGGAGGCCAAGTACCGGGAAGCCCTGG
AGGAGGCGTTACGGGCAGCCAGGGAGCATGGGAACGCGTCCCCGCAGGCG
GTGGCTGCGTGGGACATTGTCGACGAGATTGAGCAGGCGGAGGCGGATAG
CGTGGCGTTCGGAGGAGACGGGGTGGAGGGGCGAGCGATGGACCGCGCCT
CGCAAGCGGAGGCCAAGTACCGGGAAGCCCTGGAGGAGGCGTTACGGGCA
GCCAGGGAGCATGGGAACGCGTCCCCGCAGGCGGTGGCTGCGTGGGACAT
TGTCGACGAGATTGAGGCGTCCAACAACTCCATCGCCTGGAGACCGGCTT
TAGATCAGGCCTGCTCTACCGAGGGGGGCGTCCAACAACTCCATCGCCTG
GAGACCGGCTTTAGATCAGGCCTGCTCTACCGAGGGGGACGACATGGAGC
TGTGCATAGAGTACAACAAGGACCTGGAGCGCCTCGAAGAGATCCTTAGC
CCGCCCGCCACGGCCCCTGAGGAAGAACCAAGGTACGCACGACATGGAGC
TGTGCATAGAGTACAACAAGGACCTGGAGCGCCTCGAAGAGATCCTTAGC
CCGCCCGCCACGGCCCCTGAGGAAGAACCAAGGTACGCGATGGTTCTGAG
CGAAATTGTGCCGGTTCGAGTGCCGAACCTCCGAACCAAGTTCCCGCCTT
CCAAGGTCTCCAACTTCGAGATCGCGTCGGACAGCCAGGGAGGCGCCACG
CACTACACCAAGCTCATCGGGGAAGACGATGTTGTGATATACGGATGGTT
CTGAGCGAAATTGTGCCGGTTCGAGTGCCGAACCTCCGAACCAAGTTCCC
GCCTTCCAAGGTCTCCAACTTCGAGATCGCGTCGGACAGCCAGGGAGGCG
CCACGCACTACACCAAGCTCATCGGGGAAGACGATGTTGTGATATACGAG
CACGTTCGGGGAGCGGGGAGGATGCCGTCAGCCAAGGGTTTTCTTCGCGC
AGAGCACGTTCGGGGAGCGGGGAGGATGCCGTCAGCCAAGGGTTTTCTTC
GCGCAGGGCCGCGAGCGTCGCTTCATTTCAAGCCCAAGGAGGTTCGCGCG
GCCGTGGTGACCTGCGGGGGGCTTTGCCCGGGACTCAACAGCGTCATCCA
CCACCTCGTGCTGACGCTCTTGAAGATCTACGACGCTGAGAAGGGCCGCG
AGCGTCGCTTCATTTCAAGCCCAAGGAGGTTCGCGCGGCCGTGGTGACCT
GCGGGGGGCTTTGCCCGGGACTCAACAGCGTCATCCACCACCTCGTGCTG
ACGCTCTTGAAGATCTACGACGCTGAGAAGGTGATGGGCATCGTGGGGGG
CTTCGCCGGGTTCTGGGACGAGAACCAGCCCCCTGTGGACCTGACCGTCA
AGGGGGTGGAGCGGATACAGCACGAGGGCGGCTCCATATTAGGGTAAGTG
ATGGGCATCGTGGGGGGCTTCGCCGGGTTCTGGGACGAGAACCAGCCCCC
TGTGGACCTGACCGTCAAGGGGGTGGAGCGGATACAGCACGAGGGCGGCT
CCATATTAGGGTAA
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