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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-01_007790.1 |
| Exons | 2 |
| Model size | 1594 |
| Cds size | 981 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815548.2483244-UTR-L-elsbetiae_contig13940:689..1284 | 1622815548.2483244-UTR-L-elsbetiae_contig13940:689..1284 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13940 690..1284 - |
| 1691682952.8052757-UTR-L-elsbetiae_contig13940:689..1284 | 1691682952.8052757-UTR-L-elsbetiae_contig13940:689..1284 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13940 690..1284 - |
| 1622815548.2884336-UTR-L-elsbetiae_contig13940:2545..2563 | 1622815548.2884336-UTR-L-elsbetiae_contig13940:2545..2563 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13940 2546..2563 - |
| 1691682952.832548-UTR-L-elsbetiae_contig13940:2545..2563 | 1691682952.832548-UTR-L-elsbetiae_contig13940:2545..2563 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13940 2546..2563 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815548.2649615-CDS-L-elsbetiae_contig13940:1284..1893 | 1622815548.2649615-CDS-L-elsbetiae_contig13940:1284..1893 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13940 1285..1893 - |
| 1691682952.8158371-CDS-L-elsbetiae_contig13940:1284..1893 | 1691682952.8158371-CDS-L-elsbetiae_contig13940:1284..1893 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13940 1285..1893 - |
| 1622815548.277459-CDS-L-elsbetiae_contig13940:2173..2545 | 1622815548.277459-CDS-L-elsbetiae_contig13940:2173..2545 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13940 2174..2545 - |
| 1691682952.8241258-CDS-L-elsbetiae_contig13940:2173..2545 | 1691682952.8241258-CDS-L-elsbetiae_contig13940:2173..2545 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13940 2174..2545 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13940.2954.1 >prot_L-elsbetiae_contig13940.2954.1 ID=prot_L-elsbetiae_contig13940.2954.1|Name=mRNA_L-elsbetiae_contig13940.2954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MADSGEWKCFHNITHESQRALAEMNETLGSLRQWNKQRRVDLSPAPTRLE
DAPTAVVTGEQLLSEENPSTHLDCSSELITTLTSDSGNLGVDSANACGRE
SFQSVLDKDTLGDGQEDPLLILWQEHHLRAQQAVGRLQEQLDRHPTALSL
KNRDSSASNIKNTESDNVDTTIAETTHDRELLIRNLLARQGAAESSPGNG
DDGHEGSVDRVAELSRNVDGLQIHQWIQTTRTQACDHAETLAREACEDIK
RGAGSAAMGEMEGELDGFAQELNALLLRIDRADNDDREEEGGEGNSMLQS
QALHNHHPPSGLAPVADAHVDRAASE* back to topmRNA from alignment at L-elsbetiae_contig13940:690..2563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig13940.2954.1 ID=mRNA_L-elsbetiae_contig13940.2954.1|Name=mRNA_L-elsbetiae_contig13940.2954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1874bp|location=Sequence derived from alignment at L-elsbetiae_contig13940:690..2563- (Laminarionema elsbetiae ELsaHSoW15)
CAGAGGCTTTCTTGTGCGATGGCGGACAGTGGGGAATGGAAGTGTTTTCA
CAACATCACTCACGAGAGCCAACGCGCACTCGCGGAGATGAACGAGACGC
TCGGTTCACTTCGGCAGTGGAACAAACAGCGCAGAGTTGACTTATCGCCA
GCACCCACTAGACTTGAGGATGCACCAACGGCAGTCGTCACAGGGGAGCA
ACTGCTATCGGAAGAAAACCCGAGCACCCATCTTGACTGTTCCTCAGAGC
TGATCACGACGTTGACGAGCGACAGCGGCAATTTGGGTGTCGACAGCGCA
AACGCTTGTGGCCGAGAAAGCTTCCAGAGCGTACTTGACAAAGACACCTT
GGGTGATGGACAGGAGGACCCTCTGCTCATCCTGTGGCAGGTAGCGGTGG
ACTCATAGTGTGCCTCGCGACCAACTACAACAAGCTTTTGGACTATGTGG
TCCTTGTTTGTGCAACTAGCAGGGCTAATGCTGGCGAGTATCATGCCTCC
CTGTTCGTTCAGCCGTGCGAACACCCGTGCCTAATGACGGTGCTTATCCC
ATTCTAGGTGTGTTTTGGAAGATATCGTATAGAACGACCCACCGAGAAAG
GCACACATGTTGTCTACCTATTCAGTTCTCAAAGTTGCTGTTTACAACCC
ACCATACAATACTGTTGCAGGAGCATCACCTTCGAGCGCAACAGGCGGTT
GGGAGGCTCCAGGAGCAGCTGGATCGCCACCCTACCGCCTTGTCGCTGAA
AAATCGCGACAGTAGTGCCAGCAACATTAAGAACACCGAAAGCGACAATG
TCGACACGACAATCGCTGAAACAACACACGACAGAGAGCTGCTTATTCGC
AACCTGCTGGCCCGACAAGGAGCAGCAGAATCGTCACCAGGCAACGGTGA
CGATGGACATGAAGGCAGTGTGGACCGTGTGGCAGAGCTCAGTCGAAACG
TTGATGGTCTTCAGATACACCAGTGGATCCAAACTACGAGGACACAGGCG
TGCGATCATGCGGAGACGCTTGCCCGCGAGGCGTGCGAGGATATCAAGCG
GGGGGCAGGGTCTGCTGCTATGGGGGAGATGGAGGGGGAGCTCGACGGCT
TTGCGCAGGAACTAAACGCGTTGCTACTGAGGATTGACCGTGCCGACAAC
GATGACAGAGAAGAAGAGGGGGGTGAAGGCAACAGTATGTTACAGTCGCA
AGCTCTTCATAATCACCATCCTCCGAGTGGGCTTGCTCCCGTTGCAGATG
CACACGTCGACCGTGCAGCATCAGAGTGATGTAAGGCGACTAGGGTTCCT
TTCCGCGATTCTCACACAGCGAGATTGCGTTGTATATTATTTCAACATAT
GTGACGACATATGGTTAGCTGCATGTGTCTCATCTCGTCGTAGCTTTTGA
GTTGAATATTCGCGCACAGAGTGCTGTATCGCCGTGGGTCCATCGTCGGG
CGATTTGTTGAAGGGGGTGCCTTTTTGCCTGAAGCGGGGGGGAGATACGT
TGTAACTCGTTTGTGGAGTTTGCCGTGATCTGGAGAGAGGGAGGACCAAT
TGCTTAATCAACACGAAAATGAAAACATCAAGGATTGCAGACGACGGTTC
GAACGGATAGAAGGGAGCTTCATCTTCTACATACTACATAGACTACCACC
ACTATGTATGCAGGTTACATGCAGCAGTATTATATCTTGTCAGAGGATAT
AGATCCCACACACCGAACGTAGACGTGCCATGTCCGACCGGCATGTAAGC
GAATGCTAGATAGAGCGGCGAGGAGACAAAATACTGGAGTCCACGCTTTG
GGTTGTAAAAGACGAGCAAATGGGGATGGATCCATGGACCCGCCGCAAGC
AAGGATCTCCACGGCGCCCGTGTC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig13940:690..2563- >mRNA_L-elsbetiae_contig13940.2954.1 ID=mRNA_L-elsbetiae_contig13940.2954.1|Name=mRNA_L-elsbetiae_contig13940.2954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1962bp|location=Sequence derived from alignment at L-elsbetiae_contig13940:690..2563- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACAGTGGGGAATGGAAGTGTTTTCACAACATCACTCACGAGAG
CCAACGCGCACTCGCGGAGATGAACGAGACGCTCGGTTCACTTCGGCAGT
GGAACAAACAGCGCAGAGTTGACTTATCGCCAGCACCCACTAGACTTGAG
GATGCACCAACGGCAGTCGTCACAGGGGAGCAACTGCTATCGGAAGAAAA
CCCGAGCACCCATCTTGACTGTTCCTCAGAGCTGATCACGACGTTGACGA
GCGACAGCGGCAATTTGGGTGTCGACAGCGCAAACGCTTGTGGCCGAGAA
AGCTTCCAGAGCGTACTTGACAAAGACACCTTGGGTGATGGACAGGAGGA
CCCTCTGCTCATCCTGTGGCAGATGGCGGACAGTGGGGAATGGAAGTGTT
TTCACAACATCACTCACGAGAGCCAACGCGCACTCGCGGAGATGAACGAG
ACGCTCGGTTCACTTCGGCAGTGGAACAAACAGCGCAGAGTTGACTTATC
GCCAGCACCCACTAGACTTGAGGATGCACCAACGGCAGTCGTCACAGGGG
AGCAACTGCTATCGGAAGAAAACCCGAGCACCCATCTTGACTGTTCCTCA
GAGCTGATCACGACGTTGACGAGCGACAGCGGCAATTTGGGTGTCGACAG
CGCAAACGCTTGTGGCCGAGAAAGCTTCCAGAGCGTACTTGACAAAGACA
CCTTGGGTGATGGACAGGAGGACCCTCTGCTCATCCTGTGGCAGGAGCAT
CACCTTCGAGCGCAACAGGCGGTTGGGAGGCTCCAGGAGCAGCTGGATCG
CCACCCTACCGCCTTGTCGCTGAAAAATCGCGACAGTAGTGCCAGCAACA
TTAAGAACACCGAAAGCGACAATGTCGACACGACAATCGCTGAAACAACA
CACGACAGAGAGCTGCTTATTCGCAACCTGCTGGCCCGACAAGGAGCAGC
AGAATCGTCACCAGGCAACGGTGACGATGGACATGAAGGCAGTGTGGACC
GTGTGGCAGAGCTCAGTCGAAACGTTGATGGTCTTCAGATACACCAGTGG
ATCCAAACTACGAGGACACAGGCGTGCGATCATGCGGAGACGCTTGCCCG
CGAGGCGTGCGAGGATATCAAGCGGGGGGCAGGGTCTGCTGCTATGGGGG
AGATGGAGGGGGAGCTCGACGGCTTTGCGCAGGAACTAAACGCGTTGCTA
CTGAGGATTGACCGTGCCGACAACGATGACAGAGAAGAAGAGGGGGGTGA
AGGCAACAGTATGTTACAGTCGCAAGCTCTTCATAATCACCATCCTCCGA
GTGGGCTTGCTCCCGTTGCAGATGCACACGTCGACCGTGCAGCATCAGAG
TGAGAGCATCACCTTCGAGCGCAACAGGCGGTTGGGAGGCTCCAGGAGCA
GCTGGATCGCCACCCTACCGCCTTGTCGCTGAAAAATCGCGACAGTAGTG
CCAGCAACATTAAGAACACCGAAAGCGACAATGTCGACACGACAATCGCT
GAAACAACACACGACAGAGAGCTGCTTATTCGCAACCTGCTGGCCCGACA
AGGAGCAGCAGAATCGTCACCAGGCAACGGTGACGATGGACATGAAGGCA
GTGTGGACCGTGTGGCAGAGCTCAGTCGAAACGTTGATGGTCTTCAGATA
CACCAGTGGATCCAAACTACGAGGACACAGGCGTGCGATCATGCGGAGAC
GCTTGCCCGCGAGGCGTGCGAGGATATCAAGCGGGGGGCAGGGTCTGCTG
CTATGGGGGAGATGGAGGGGGAGCTCGACGGCTTTGCGCAGGAACTAAAC
GCGTTGCTACTGAGGATTGACCGTGCCGACAACGATGACAGAGAAGAAGA
GGGGGGTGAAGGCAACAGTATGTTACAGTCGCAAGCTCTTCATAATCACC
ATCCTCCGAGTGGGCTTGCTCCCGTTGCAGATGCACACGTCGACCGTGCA
GCATCAGAGTGA back to top
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