mRNA_L-elsbetiae_contig13893.2930.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A6H5KJU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU0_9PHAE) HSP 1 Score: 157 bits (398), Expect = 4.520e-48 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGR DDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL Sbjct: 62 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRTDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 140
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A835Z2S7_9STRA (Sedlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2S7_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.690e-31 Identity = 53/79 (67.09%), Postives = 67/79 (84.81%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YLR+VDKFNEQ VSA+LTA G +LMLLHDGR ++ I +FF +VHELYVK ++NPFY +D+P+ISP FD+RV+ALA K L Sbjct: 61 YLRVVDKFNEQIVSAYLTAAGVRLMLLHDGRSEEGIGSFFKDVHELYVKHMLNPFYRFDTPIISPEFDERVRALAVKWL 139
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A7S0FIJ0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIJ0_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.990e-30 Identity = 50/79 (63.29%), Postives = 65/79 (82.28%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YL++VDK N Q VS FLTAG K MLLH G+ +D+I+ FF++V+ELYVKLL+NPFYAYD+P+ S AFD RV+A+AR+ L Sbjct: 56 YLKVVDKVNHQQVSTFLTAGNVKFMLLHGGKNEDSIKNFFSDVYELYVKLLLNPFYAYDTPITSKAFDTRVRAIARRYL 134
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A7S2US08_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US08_9STRA) HSP 1 Score: 112 bits (279), Expect = 5.280e-30 Identity = 48/77 (62.34%), Postives = 65/77 (84.42%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARK 234 YL+ +DKFN+ ++S ++TA G + +LLHDGR DDAI+ FF++V+ELYV+LLMNPFY YDS V+SPAFD RV+ LAR+ Sbjct: 59 YLKTIDKFNDMSISGWITAQGIRFLLLHDGRSDDAIKNFFSDVYELYVRLLMNPFYKYDSQVLSPAFDHRVRILARR 135
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: H3G6S7_PHYRM (Uncharacterized protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3G6S7_PHYRM) HSP 1 Score: 109 bits (273), Expect = 3.630e-29 Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 7 LRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 L++VD+FN+Q VSAF+TA G K +LLH+ R DD ++ FF EVHELYVKLLMNPFY YD+P+ S FD RVK LAR+ L Sbjct: 54 LKVVDRFNDQLVSAFVTASGVKFLLLHETRNDDTVKAFFHEVHELYVKLLMNPFYEYDTPISSEVFDARVKTLARRYL 131
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A7R9WLH9_9STRA (Trafficking protein particle complex subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLH9_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.570e-28 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YLR+VDK N Q VSAF TAG K MLLH G+ DD IR FF EV+ELYVK+ MNPFY YD+P+ S FD+RV+++AR+ L Sbjct: 62 YLRVVDKVNHQQVSAFQTAGNIKFMLLHAGKSDDTIRNFFNEVYELYVKVSMNPFYHYDTPITSKEFDKRVRSVARRYL 140
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: K3WSU6_GLOUD (Uncharacterized protein n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WSU6_GLOUD) HSP 1 Score: 106 bits (265), Expect = 5.630e-28 Identity = 50/78 (64.10%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 7 LRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 L++VDKFN+Q VSAF+TA K +LLH+ R DD I+ FF EVHELY+KLLMNPFY YD+P+ S FD RVK LAR+ L Sbjct: 52 LKVVDKFNDQLVSAFVTATSVKFLLLHETRNDDTIKAFFHEVHELYLKLLMNPFYEYDTPIKSEVFDARVKTLARRYL 129
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A1Z5K0Y6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0Y6_FISSO) HSP 1 Score: 107 bits (266), Expect = 5.890e-28 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHD---GRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YL++VDK N+Q VS FLTAG KLMLLH+ + ++AIR FF +V+ELYVK MNPFYAYD+P+IS AFD RV+AL RK L Sbjct: 61 YLKIVDKVNQQQVSTFLTAGNIKLMLLHNVHQNKSEEAIRQFFQDVYELYVKFSMNPFYAYDTPIISEAFDTRVRALGRKYL 142
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A7S1VQ48_9STRA (Trafficking protein particle complex subunit n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ48_9STRA) HSP 1 Score: 106 bits (265), Expect = 7.260e-28 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YL++VDK N+Q VS FLTAG K MLLH GR +D+IR FF +V+ELYVKL MNPFY YD+P+ + +FD RV+ +AR+ L Sbjct: 59 YLKVVDKVNQQQVSTFLTAGNIKFMLLHSGRSEDSIRNFFNDVYELYVKLSMNPFYRYDTPITAKSFDTRVRQVARRYL 137
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Match: A0A7S2N4C3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4C3_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.130e-27 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 4 YLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKLLMNPFYAYDSPVISPAFDQRVKALARKLL 240 YL++VDK N Q VS FLTAG K MLLH GR +D+I+ FF +++ELYVKL MNPFY YD+P+ S FD RV+A+AR+ L Sbjct: 75 YLKVVDKVNHQQVSTFLTAGNIKFMLLHGGRSEDSIKNFFTDIYELYVKLSMNPFYKYDTPISSKNFDTRVRAIARRYL 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13893.2930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13893.2930.1 >prot_L-elsbetiae_contig13893.2930.1 ID=prot_L-elsbetiae_contig13893.2930.1|Name=mRNA_L-elsbetiae_contig13893.2930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp RYLRLVDKFNEQNVSAFLTAGGAKLMLLHDGRPDDAIRTFFAEVHELYVKback to top mRNA from alignment at L-elsbetiae_contig13893:543..1270+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13893.2930.1 ID=mRNA_L-elsbetiae_contig13893.2930.1|Name=mRNA_L-elsbetiae_contig13893.2930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=728bp|location=Sequence derived from alignment at L-elsbetiae_contig13893:543..1270+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13893:543..1270+ >mRNA_L-elsbetiae_contig13893.2930.1 ID=mRNA_L-elsbetiae_contig13893.2930.1|Name=mRNA_L-elsbetiae_contig13893.2930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=486bp|location=Sequence derived from alignment at L-elsbetiae_contig13893:543..1270+ (Laminarionema elsbetiae ELsaHSoW15)back to top |