mRNA_L-elsbetiae_contig13799.2872.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13799.2872.1
Unique NamemRNA_L-elsbetiae_contig13799.2872.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.700e-80
Identity = 160/278 (57.55%), Postives = 178/278 (64.03%), Query Frame = 1
Query:    1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAA-------------VAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVLS 795
            RLIVANTHLYFHPNAAHIRLMQLV LVERISR+RKDL+ARGLRP VILGGDLNSPP GPVRYLMG++IGPD+DLW N+GTFKWGDRFFDE+ T                            A+P  +                S + +      FLP VPYLR P  L+L SGTP FTNFTP+FT+TLDYVFIEG  AD+G TP +       A +AVL VE A                  VAPMPEE PLRA TPGLPSETFPSDH+SLVVDL LS
Sbjct:  450 RLIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGXXXXXXXXXXXXXXSRIPDEKAST-ASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFIEGAGADSG-TPTT-------AAEAVLAVEGAXXXXXXXXXXXXXXXXXXVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDLALS 718          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.300e-59
Identity = 122/211 (57.82%), Postives = 137/211 (64.93%), Query Frame = 1
Query:    1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAAR----------PSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAG 603
            R+IVANTHLYFHPNAAHIRLMQLV LVERISR+RKDL+ARGLRP V+LGGDLNS P GPVRYLMG++IGPD+DLW NVGTFKWGDRFFDE+ T                 P++R  DG             A+P  +                S + +      FL  VP LR PL L+L SGTP FTNFTPEFTETLDYVFIEG  AD G
Sbjct:  620 RVIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKWGDRFFDELPTTSGAXXXXXXXXXXXXSPTSRIPDGKAST---------ASPRPNNATNNNDNETTRASHHSVAGSKAKPSPFLRNVPCLRTPLDLQLASGTPAFTNFTPEFTETLDYVFIEGAGADNG 821          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A836CIF3_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF3_9STRA)

HSP 1 Score: 139 bits (349), Expect = 4.350e-31
Identity = 106/262 (40.46%), Postives = 148/262 (56.49%), Query Frame = 1
Query:    1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786
            R+IVANTHL+FHPNAAHIRL+Q+VAL+  +  IR+ L++ G    V++ GD+NS P   +RYL G+ +  ++ +W +V  F+WG+R+F       +VAA   +         XXXXXXXX        XXXXXXXXXXXXX          +   +  +P + +PL L   SG PP+TNFTP FT+TLDY+F +    +A                            + AP+P EA LRA+T GLP   +PSDH+++V D+
Sbjct:  533 RIIVANTHLFFHPNAAHIRLIQMVALMNAVQGIRERLLSEGQEVGVVVCGDMNSTPLTAIRYLEGDTLSAEHAVWRHVRAFRWGERYFKSAKA--KVAAEDGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGPVSAIPTVALPLPLTNASGYPPYTNFTPAFTDTLDYIFADTDSFEA---------------------------VSSAPVPPEAELRAITVGLPYRGYPSDHVAVVADI 765          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: W7T5B9_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5B9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.350e-19
Identity = 84/275 (30.55%), Postives = 117/275 (42.55%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVAR-GLRPVVILGGDLNSPPF-GPVRYLMGEVIGPDNDLWGNVGTFKWGDR--------FFDEIATAPEVAARPSARGA----DGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786
            L+V NTHL++HP A HIRLMQ+  LV  ++  + ++  + G+RP ++L GDLNS P    +RYL GE IGP++++W ++  F WG R             ATA  + A    +G     DG            G     S                  S    +       +P L +        G P FTN+   F ETLDY+F+E   A   + P             VL V A        P  EEA        LPS   PSDH+S++ D+
Sbjct:   19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLES-EAPVPLDPSGASFS-------VLSVGAM-------PTREEA---GQDTALPSWQTPSDHVSILCDV 275          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: W7TNA6_9STRA (Endonuclease/exonuclease/phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.270e-18
Identity = 84/275 (30.55%), Postives = 117/275 (42.55%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVAR-GLRPVVILGGDLNSPPF-GPVRYLMGEVIGPDNDLWGNVGTFKWGDR--------FFDEIATAPEVAARPSARGA----DGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786
            L+V NTHL++HP A HIRLMQ+  LV  ++  + ++  + G+RP ++L GDLNS P    +RYL GE IGP++++W ++  F WG R             ATA  + A    +G     DG            G     S                  S    +       +P L +        G P FTN+   F ETLDY+F+E   A   + P             VL V A        P  EEA        LPS   PSDH+S++ D+
Sbjct:   60 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLES-EAPVPLDPSGASFS-------VLSVGAM-------PTREEA---GQDTALPSWQTPSDHVSILCDV 316          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812UPP5_9DINO (PDE12 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UPP5_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 2.110e-10
Identity = 74/271 (27.31%), Postives = 111/271 (40.96%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIR---KDLVARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792
            L+++NTHL++HPNA HIRL+Q++ L+  +  +R   KD  A G  P VI  GDLN  P  G V+ L+   +  D++ W     F W D      A   E   R S                     P+                  S  V P  +  +  G    LR PLG  +++ + +P  FTN+  +F+  LDY+  +                     D +L  +       +AP  ++  +     GLPSE  PSDH+S+  DL  
Sbjct:  996 LVLSNTHLFYHPNARHIRLLQIMCLLHEVQALREQHKD--AEGRLPHVIFAGDLNCLPETGAVQLLLNGEVASDHEDWETSSQFAWRDEEVSADAGEAEEVPRTS--------------------VPSMEADE-------------SDVVEPLGREAWQKGSGIALRNPLGALVDVYANSPQKFTNYVHDFSGILDYILTD---------------------DHLLSTKCL-----LAPAEKDVEVHG---GLPSELHPSDHLSIAADLTF 1202          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812Y3X2_SYMPI (Pde12 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y3X2_SYMPI)

HSP 1 Score: 73.6 bits (179), Expect = 5.780e-10
Identity = 78/269 (29.00%), Postives = 108/269 (40.15%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKD-LVARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792
            L++ANTHL++HPNA HIRL+Q++ L+ ++  +R+    A+G  P VI  GDLN  P  G V+ L+   +  D++ W     F W D          EV+A   A  AD   P           A                       V P  K H+  G    L  PLG  +++ + TP  FTN+  EF   LDY+                        D  L+      A A   + E         GLPS   PSDH+S+  DL  
Sbjct:  708 LVLANTHLFYHPNARHIRLLQIMCLLHQVQELREQHRDAKGQLPNVIFAGDLNCLPETGAVQLLLKGEVTSDHEDWETSSQFAWRDE---------EVSA--DAGEADECAPKSSVPSMEADEADV---------------------VEPLPKEHWQNGRGIALHNPLGALVDVYAKTPQKFTNYVHEFRGILDYILT----------------------DDQLQSTKCLLAPAEKDVEEHG-------GLPSVLHPSDHLSIAADLTF 915          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812NHM5_SYMMI (Pde12 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHM5_SYMMI)

HSP 1 Score: 73.2 bits (178), Expect = 7.330e-10
Identity = 71/269 (26.39%), Postives = 110/269 (40.89%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLV-ARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792
            L++ANTHL++HPNA HIRL+Q++ L+  +  +RK    A G  P +I  GDLN  P  G V+ L+   +  D++ W     F W D   +  A A E    P +                  + P+                     V P  +  +  G    L+ PLG  +++ + TP  FTN+  +F+  LDY+  +G                          +  A    +AP  ++  +     GLPS   PSDH+S+  DL  
Sbjct:  273 LVLANTHLFYHPNARHIRLLQIMCLLHEVQDLRKQHKDAEGQLPHIIFAGDLNCLPETGAVQLLLTGQVPSDHEDWETSSQFAWRDE--EASADAGEAEEIPKS------------------SVPSMEADDTDV-------------VEPLPREAWQKGSGIALQNPLGALVDVYANTPQKFTNYVHDFSGILDYILTDG--------------------------QLQATKCLLAPAEKDVEVHG---GLPSVLHPSDHLSIAADLTF 479          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812M0P0_9DINO (MPK1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812M0P0_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 8.330e-10
Identity = 71/269 (26.39%), Postives = 110/269 (40.89%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLV-ARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792
            L++ANTHL++HPNA HIRL+Q++ L+  +  +RK    A G  P +I  GDLN  P  G V+ L+   +  D++ W     F W D   +  A A E    P +                  + P+                     V P  +  +  G    L+ PLG  +++ + TP  FTN+  +F+  LDY+  +G                          +  A    +AP  ++  +     GLPS   PSDH+S+  DL  
Sbjct:  587 LVLANTHLFYHPNARHIRLLQIMCLLHEVQDLRKQHKDAEGQLPHIIFAGDLNCLPETGAVQLLLTGQVPSDHEDWETSSQFAWRDE--EASADAGEAEEIPKS------------------SVPSMEADDTDV-------------VEPLPREAWQKGSGIALQNPLGALVDVYANTPQKFTNYVHDFSGILDYILTDG--------------------------QLQATKCLLAPAEKDVEVHG---GLPSVLHPSDHLSIAADLTF 793          
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: L1JXM2_GUITC (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JXM2_GUITC)

HSP 1 Score: 70.5 bits (171), Expect = 1.120e-9
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1
Query:    4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILG-GDLNSPP-FGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADG 324
            LI+ NTHL+FHP A+HIR++Q+ A++     +++ +  R  R   +L  GDLNS P  G +  L G  + P +  W     F+WGD   +E+       + PS R  +G
Sbjct:  117 LIIVNTHLFFHPEASHIRMLQVSAILTEAMDMKERMEERSQRACAVLFVGDLNSEPDTGAIELLAGGAVSPQHPEWEAHAGFRWGDNGEEEVGV--HADSGPSVRREEG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYP3_ECTSI1.700e-8057.55Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JRV9_9PHAE1.300e-5957.82Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A836CIF3_9STRA4.350e-3140.46Endonuclease/exonuclease/phosphatase n=1 Tax=Tribo... [more]
W7T5B9_9STRA6.350e-1930.55Endonuclease/exonuclease/phosphatase n=1 Tax=Nanno... [more]
W7TNA6_9STRA1.270e-1830.55Endonuclease/exonuclease/phosphatase n=2 Tax=Monod... [more]
A0A812UPP5_9DINO2.110e-1027.31PDE12 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A812Y3X2_SYMPI5.780e-1029.00Pde12 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A812NHM5_SYMMI7.330e-1026.39Pde12 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A812M0P0_9DINO8.330e-1026.39MPK1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
L1JXM2_GUITC1.120e-934.86Endo/exonuclease/phosphatase domain-containing pro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13799contigL-elsbetiae_contig13799:2..2896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.1
Seed ortholog evalue1.7e-59
Seed eggNOG ortholog2880.D7FYP3
KEGG koko:K19612
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGsCOG5239@1,KOG0620@2759
EC3.1.13.4
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019,ko03029
Exons3
Model size1621
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13799.2872.1prot_L-elsbetiae_contig13799.2872.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13799 822..2836 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.4837484-UTR-L-elsbetiae_contig13799:1..8211622815539.4837484-UTR-L-elsbetiae_contig13799:1..821Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13799 2..821 -
1691682948.1579347-UTR-L-elsbetiae_contig13799:1..8211691682948.1579347-UTR-L-elsbetiae_contig13799:1..821Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13799 2..821 -
1622815539.5342057-UTR-L-elsbetiae_contig13799:2836..28961622815539.5342057-UTR-L-elsbetiae_contig13799:2836..2896Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13799 2837..2896 -
1691682948.2058213-UTR-L-elsbetiae_contig13799:2836..28961691682948.2058213-UTR-L-elsbetiae_contig13799:2836..2896Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13799 2837..2896 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815539.4975863-CDS-L-elsbetiae_contig13799:821..13741622815539.4975863-CDS-L-elsbetiae_contig13799:821..1374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 822..1374 -
1691682948.1765893-CDS-L-elsbetiae_contig13799:821..13741691682948.1765893-CDS-L-elsbetiae_contig13799:821..1374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 822..1374 -
1622815539.5136712-CDS-L-elsbetiae_contig13799:1812..19741622815539.5136712-CDS-L-elsbetiae_contig13799:1812..1974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 1813..1974 -
1691682948.1875253-CDS-L-elsbetiae_contig13799:1812..19741691682948.1875253-CDS-L-elsbetiae_contig13799:1812..1974Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 1813..1974 -
1622815539.5244188-CDS-L-elsbetiae_contig13799:2810..28361622815539.5244188-CDS-L-elsbetiae_contig13799:2810..2836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 2811..2836 -
1691682948.19605-CDS-L-elsbetiae_contig13799:2810..28361691682948.19605-CDS-L-elsbetiae_contig13799:2810..2836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13799 2811..2836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13799.2872.1

>prot_L-elsbetiae_contig13799.2872.1 ID=prot_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp
MQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGP
DNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPPPPGGTST
GAAPTKSGGGEGDGDGDGAGAPGSASVTPNAKRHFLPGVPYLRVPLGLEL
VSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLR
VEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVLSV*
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mRNA from alignment at L-elsbetiae_contig13799:2..2896-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13799.2872.1 ID=mRNA_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2895bp|location=Sequence derived from alignment at L-elsbetiae_contig13799:2..2896- (Laminarionema elsbetiae ELsaHSoW15)
AGGCTGATTGTGGCCAACACGCACCTGTACTTTCACCCCAACGCAGCGCA CATCCGGCTCATGCAGCTCGTCGCGCTTGTCGAGAGGTGCGTGCGGCGAT GTGAGCGCGGTTGAGCTCCAAACAACGGCGTGCAGCCAGCAAGACAGACC CACCGACGACAGCAGTAGAGCGGGAAGTCGATGATGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTTTCACATTAAAAACCGTTCCGATCTCTCT ATCCAGTACCTCCAGACATGCTATATTTAGTCCAACACTGACGTGGTCGA TTCCCGTGGTCACAGGATAACTTACCCTAAAAAGGTATACTTGAAAATAA AAAATATAATGGATCCGAAGGGTCCGCAAAGCACGAAAAAACTAAAGGCC AGACACCTCTAGCATGTTATTATGTAATTCTTGTTTTGGTGGGTCGAATT TCGGGTTTTAGTTTGGCCTTCCTCTTGCAGTTCAATTGGCAAAAAGGGTG ACGGCGGTTTCAAAGTTCGCCAATTTGGGTTATTTAAGGGCTTAGGGGGA TATGTAGGTGAGCGGCCAGCTCGTGAATCGCAGCACACTTGCGCTGATAG TGTGATTGGGCGGTGCAACAACAATACTGCCCACTGCTCGTCGTGACAAA CACCGAGGGAAGGAAACAGGGGTATTGCTGCTGCCCAGAAGCGGCCCTGC CGTGTGTCGTCCCAAGCGATCCGCGTCTCGCCGAGTGTTCGCTGCTCCCT GAAAAAATTCTCCGTGAATGTCCGACGAAAAGTTAAGCGTATTTCGTTTT TGGTCGGCCCCTGGTCTCCGCCTGTACGTACGTACGCGCGCGCGCGCGCC CGCGCGCCCGCGTGCCTTCCTCCTCACGCCCTCTTTCGCAATTGCTTACC TTACCCCCCCCCCCCCCCTCAGAATATCACGCATACGGAAAGATCTCGTC GCTCGAGGCCTCAGACCCGTCGTCATCCTTGGCGGCGATCTTAACAGCCC CCCGTTTGGCCCTGTGCGCTACCTGATGGGGGAGGTCATCGGGCCGGACA ACGACCTGTGGGGCAACGTCGGCACTTTCAAGTGGTAGGCTGGGTTTGGG GTTGGGAGCGAAATTGACACGTTTTTGAGTACAGGGTTGTTCAAATAAAT TGAGGTCCGGCGACATTGTTTTTTGTATTATTTTGTATTTTCAGCTGCCT GGTGCTCTGCTGTAGGTGCGTGCGTGCGCGATTGTTGTGTTTTGTTGTGC TGTACCTTCTTGCTGCTGCTGAAACTCTCGTGTCGTCTCGTGTAGTCTCG TTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCT CTGTCTCTCTCTCTCCCTCTGCGCGCGTGAAACGAAGCACCTGGGTACAT AATATTTATCACTTCCATTATTGTTTTCTTTTTTCTTCTGGCCTCGATTC GCACCGTGTGAACGTATTTTCCATTCCCTGCCCGCGCACACACCACACCG ACAATACATCACGCGATCGTAGGGGCGACCGCTTTTTCGATGAGATAGCC ACCGCTCCAGAAGTGGCGGCAAGACCGAGCGCAAGAGGCGCGGACGGCGC AACGCCGCCGCCGCCGCCGGGTGGGACAAGCACCGGCGCCGCTCCTACCA AGAGCGGCGGGGGTGAAGGCGACGGCGACGGCGACGGCGCCGGTGCACCG GGCTCTGCGTCTGTCACCCCGAACGCCAAGCGGCACTTTCTCCCGGGCGT GCCCTACCTTAGGGTACCCCTCGGTCTCGAGCTTGTCTCGGGGACCCCGC CCTTCACCAACTTTACCCCGGAGTTCACGGAGACCCTCGACTACGTGTTC ATCGAGGGGGGGCGGGCGGACGCCGGTGTTACTCCCGGCAGCGGCGGCAT GCCCGCGGGAGCGGCCGGAGATGCCGTCCTTCGGGTTGAGGCGGCGGCGG CGGCGGCTGCAGTTGCGCCGATGCCCGAGGAGGCGCCGTTAAGGGCGATG ACCCCGGGTCTGCCGTCGGAAACGTTTCCCTCGGACCACATCTCTCTCGT CGTTGATCTCGTGCTTTCGGTGTGACGGGGAACAAGTGAGCGGGAAGGAA AGGGTTGTCGTGGTGGCGCCATCTGTTGGGTGCGGCCGTTTTTATGGCTT GCATCGTCGGTTTGCTCGGTAAGTAAACTTCTCGCGTGTGGACCCGCTCG CCCACGAGGCATGACAAAACAGGAGCATCAGATTGACGCCTCCACGTGAA TGTAGTTCGAGTTCAGAAGGATGCGCACACCCCCGCCGCGCACGGAGCAA AATTGTGGAAACCGGCAGTAAATATTCCACGCACAAGGGTGCGCCGGGGC GTTGATCATGGGATGAACGTAGTCCGGCTTCGGCATGTACTACTGTACCG ACGCTAAGAACGGGGGCGAAGTCGCGGCGGTGTTGTGTTGGGCCACGGCC AAAACAAGGTATACCTTGTGGTCACACGGCCAAAGCAGTACCGAACTTAA ACGTGCCTTGTGGTCACACGGCCAAAGCAGTACCGAACTTAAACGTGCAG GGCGTACCAAGCCCAACCTCACGCAGGGTCTCGGAGACTTTCCCAGCCGT CAAAGTATAGCCTAACCCATGCTCAGCGAAAAAGAGCCAAGAGCCTATGT CTACATGCCCGGGGGCGGGGTAGACACTCCGCCGCGCAAATACGCACGGC TGGAGTATGGCCTCGTTTGTAGTGTGGCGGAGCTATTCAGTTCTAAATCC ACTTTAGTGGTACAATATCTAATATATGTGTGTTTTATTATTTTTTAATT AATTATTGTTGGTTGGGGTTGTTTTAATTGTTTGGTTTTGGGCAGACAAT ATGGGGAAGTTTTTTATTATCTCCACAGTCCGCGTGGATGATGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13799:2..2896-

>mRNA_L-elsbetiae_contig13799.2872.1 ID=mRNA_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig13799:2..2896- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGCTCGTCGCGCTTGTCGAGAGATGCAGCTCGTCGCGCTTGTCGAG
AGAATATCACGCATACGGAAAGATCTCGTCGCTCGAGGCCTCAGACCCGT
CGTCATCCTTGGCGGCGATCTTAACAGCCCCCCGTTTGGCCCTGTGCGCT
ACCTGATGGGGGAGGTCATCGGGCCGGACAACGACCTGTGGGGCAACGTC
GGCACTTTCAAGTGAATATCACGCATACGGAAAGATCTCGTCGCTCGAGG
CCTCAGACCCGTCGTCATCCTTGGCGGCGATCTTAACAGCCCCCCGTTTG
GCCCTGTGCGCTACCTGATGGGGGAGGTCATCGGGCCGGACAACGACCTG
TGGGGCAACGTCGGCACTTTCAAGTGGGGCGACCGCTTTTTCGATGAGAT
AGCCACCGCTCCAGAAGTGGCGGCAAGACCGAGCGCAAGAGGCGCGGACG
GCGCAACGCCGCCGCCGCCGCCGGGTGGGACAAGCACCGGCGCCGCTCCT
ACCAAGAGCGGCGGGGGTGAAGGCGACGGCGACGGCGACGGCGCCGGTGC
ACCGGGCTCTGCGTCTGTCACCCCGAACGCCAAGCGGCACTTTCTCCCGG
GCGTGCCCTACCTTAGGGTACCCCTCGGTCTCGAGCTTGTCTCGGGGACC
CCGCCCTTCACCAACTTTACCCCGGAGTTCACGGAGACCCTCGACTACGT
GTTCATCGAGGGGGGGCGGGCGGACGCCGGTGTTACTCCCGGCAGCGGCG
GCATGCCCGCGGGAGCGGCCGGAGATGCCGTCCTTCGGGTTGAGGCGGCG
GCGGCGGCGGCTGCAGTTGCGCCGATGCCCGAGGAGGCGCCGTTAAGGGC
GATGACCCCGGGTCTGCCGTCGGAAACGTTTCCCTCGGACCACATCTCTC
TCGTCGTTGATCTCGTGCTTTCGGTGTGAGGGCGACCGCTTTTTCGATGA
GATAGCCACCGCTCCAGAAGTGGCGGCAAGACCGAGCGCAAGAGGCGCGG
ACGGCGCAACGCCGCCGCCGCCGCCGGGTGGGACAAGCACCGGCGCCGCT
CCTACCAAGAGCGGCGGGGGTGAAGGCGACGGCGACGGCGACGGCGCCGG
TGCACCGGGCTCTGCGTCTGTCACCCCGAACGCCAAGCGGCACTTTCTCC
CGGGCGTGCCCTACCTTAGGGTACCCCTCGGTCTCGAGCTTGTCTCGGGG
ACCCCGCCCTTCACCAACTTTACCCCGGAGTTCACGGAGACCCTCGACTA
CGTGTTCATCGAGGGGGGGCGGGCGGACGCCGGTGTTACTCCCGGCAGCG
GCGGCATGCCCGCGGGAGCGGCCGGAGATGCCGTCCTTCGGGTTGAGGCG
GCGGCGGCGGCGGCTGCAGTTGCGCCGATGCCCGAGGAGGCGCCGTTAAG
GGCGATGACCCCGGGTCTGCCGTCGGAAACGTTTCCCTCGGACCACATCT
CTCTCGTCGTTGATCTCGTGCTTTCGGTGTGA
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