mRNA_L-elsbetiae_contig13772.2861.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13772.2861.1
Unique NamemRNA_L-elsbetiae_contig13772.2861.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13772.2861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13772contigL-elsbetiae_contig13772:2460..3815 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1356
Cds size1356
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815538.5074785-CDS-L-elsbetiae_contig13772:2459..38151622815538.5074785-CDS-L-elsbetiae_contig13772:2459..3815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13772 2460..3815 -
1691682947.5602756-CDS-L-elsbetiae_contig13772:2459..38151691682947.5602756-CDS-L-elsbetiae_contig13772:2459..3815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13772 2460..3815 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13772.2861.1prot_L-elsbetiae_contig13772.2861.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13772 2460..3815 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13772.2861.1

>prot_L-elsbetiae_contig13772.2861.1 ID=prot_L-elsbetiae_contig13772.2861.1|Name=mRNA_L-elsbetiae_contig13772.2861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
QVAWPAYLRRLHLGHSFNQPIAEVSWPASLRELTFGNWFNQRLDGVALPS
CLEQLAFGRAFDQPIAGVAFPASLRRITFGSGFTQPVVPVSWPASLRQLV
FGFYFNRPIAGISLPISLQRVTFGERFNQPVAGVAWPASLKELEFVRDFN
HPVDRAAWPSSLEVLSFGKGFDQPIEDAALPGSLRHISFGARFNQAVVRA
AWPVSLQSVTFGERFDRPLEGIRWPASLRRVSLGRDFNQPIGRVAWPRSL
RLLTFGDKFDQPIPEGPAGAAGGGCFGWPDSLEGVSFGKRFDRPIAGVSW
GASLKRMAFGERFNRPIVGVAWPPSLRLLTFGACFNQSVDGVAFPDSVEE
IVFGYEFDRGVSRTAWPASLRRITFMGNFNQPVSEVVWPSRVRTIRFGFF
FNQPLAGVVFPASLEEVVFGRSFDQPVDGTDWPESLRRLHLDRHFRHPLD
GL
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mRNA from alignment at L-elsbetiae_contig13772:2460..3815-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13772.2861.1 ID=mRNA_L-elsbetiae_contig13772.2861.1|Name=mRNA_L-elsbetiae_contig13772.2861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig13772:2460..3815- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGCGTGGCCGGCCTACCTGCGGCGGCTACACCTCGGGCACAGCTT
CAACCAACCGATCGCCGAGGTCTCGTGGCCCGCCTCTCTTCGCGAGCTCA
CGTTCGGGAACTGGTTCAACCAGAGGCTGGACGGGGTCGCTCTACCGTCG
TGCCTGGAGCAGCTCGCGTTCGGCCGGGCCTTCGACCAGCCCATCGCCGG
GGTCGCCTTCCCGGCTTCCCTCCGCCGGATCACGTTCGGCAGCGGCTTCA
CGCAGCCCGTCGTCCCCGTGTCGTGGCCGGCGTCCCTGCGGCAGCTGGTG
TTCGGGTTCTACTTCAACAGGCCCATCGCGGGGATCTCCCTGCCGATCTC
CCTCCAGCGCGTCACGTTCGGCGAGAGGTTCAACCAGCCGGTGGCCGGGG
TCGCGTGGCCGGCCTCGCTGAAAGAGCTGGAGTTCGTCAGGGACTTCAAC
CACCCCGTCGACCGGGCGGCCTGGCCGAGCTCGCTGGAGGTCCTGTCCTT
CGGCAAGGGCTTCGACCAGCCGATAGAGGACGCTGCGCTCCCGGGGTCGC
TGCGGCACATCAGCTTCGGCGCGCGGTTTAACCAGGCGGTGGTTCGGGCG
GCGTGGCCGGTGTCGCTTCAGAGCGTTACGTTCGGGGAGAGGTTCGACCG
GCCCTTGGAGGGGATCAGGTGGCCAGCCTCGCTGCGACGGGTCTCGCTCG
GCCGGGACTTCAACCAGCCCATCGGGCGAGTGGCCTGGCCCCGGTCCCTT
CGGCTCCTGACCTTCGGAGACAAGTTCGACCAGCCGATCCCGGAAGGGCC
GGCAGGGGCGGCCGGTGGCGGCTGCTTCGGGTGGCCCGATTCGCTGGAGG
GGGTGTCGTTCGGGAAGCGGTTCGACCGGCCCATCGCCGGGGTCTCCTGG
GGGGCCTCGCTGAAGAGGATGGCGTTCGGGGAGCGGTTCAACCGGCCGAT
CGTCGGGGTCGCGTGGCCCCCGTCGCTGCGGCTGCTGACCTTCGGGGCGT
GCTTCAACCAGAGCGTGGACGGGGTCGCCTTCCCGGACTCGGTGGAGGAG
ATCGTCTTCGGTTACGAGTTCGACCGCGGCGTGTCGCGGACCGCCTGGCC
CGCGTCTCTCCGGCGGATCACGTTCATGGGCAACTTTAACCAGCCCGTCT
CGGAGGTGGTCTGGCCGTCTCGGGTCAGGACGATCAGGTTCGGCTTTTTC
TTCAACCAGCCGCTCGCCGGGGTCGTGTTCCCTGCGTCGCTGGAAGAGGT
CGTCTTCGGCCGGAGCTTCGACCAGCCCGTCGACGGCACCGACTGGCCCG
AGTCCCTTCGGCGCCTGCACCTGGACCGGCACTTCCGCCACCCGCTGGAC
GGCCTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13772:2460..3815-

>mRNA_L-elsbetiae_contig13772.2861.1 ID=mRNA_L-elsbetiae_contig13772.2861.1|Name=mRNA_L-elsbetiae_contig13772.2861.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2712bp|location=Sequence derived from alignment at L-elsbetiae_contig13772:2460..3815- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTGGCGTGGCCGGCCTACCTGCGGCGGCTACACCTCGGGCACAGCTT
CAACCAACCGATCGCCGAGGTCTCGTGGCCCGCCTCTCTTCGCGAGCTCA
CGTTCGGGAACTGGTTCAACCAGAGGCTGGACGGGGTCGCTCTACCGTCG
TGCCTGGAGCAGCTCGCGTTCGGCCGGGCCTTCGACCAGCCCATCGCCGG
GGTCGCCTTCCCGGCTTCCCTCCGCCGGATCACGTTCGGCAGCGGCTTCA
CGCAGCCCGTCGTCCCCGTGTCGTGGCCGGCGTCCCTGCGGCAGCTGGTG
TTCGGGTTCTACTTCAACAGGCCCATCGCGGGGATCTCCCTGCCGATCTC
CCTCCAGCGCGTCACGTTCGGCGAGAGGTTCAACCAGCCGGTGGCCGGGG
TCGCGTGGCCGGCCTCGCTGAAAGAGCTGGAGTTCGTCAGGGACTTCAAC
CACCCCGTCGACCGGGCGGCCTGGCCGAGCTCGCTGGAGGTCCTGTCCTT
CGGCAAGGGCTTCGACCAGCCGATAGAGGACGCTGCGCTCCCGGGGTCGC
TGCGGCACATCAGCTTCGGCGCGCGGTTTAACCAGGCGGTGGTTCGGGCG
GCGTGGCCGGTGTCGCTTCAGAGCGTTACGTTCGGGGAGAGGTTCGACCG
GCCCTTGGAGGGGATCAGGTGGCCAGCCTCGCTGCGACGGGTCTCGCTCG
GCCGGGACTTCAACCAGCCCATCGGGCGAGTGGCCTGGCCCCGGTCCCTT
CGGCTCCTGACCTTCGGAGACAAGTTCGACCAGCCGATCCCGGAAGGGCC
GGCAGGGGCGGCCGGTGGCGGCTGCTTCGGGTGGCCCGATTCGCTGGAGG
GGGTGTCGTTCGGGAAGCGGTTCGACCGGCCCATCGCCGGGGTCTCCTGG
GGGGCCTCGCTGAAGAGGATGGCGTTCGGGGAGCGGTTCAACCGGCCGAT
CGTCGGGGTCGCGTGGCCCCCGTCGCTGCGGCTGCTGACCTTCGGGGCGT
GCTTCAACCAGAGCGTGGACGGGGTCGCCTTCCCGGACTCGGTGGAGGAG
ATCGTCTTCGGTTACGAGTTCGACCGCGGCGTGTCGCGGACCGCCTGGCC
CGCGTCTCTCCGGCGGATCACGTTCATGGGCAACTTTAACCAGCCCGTCT
CGGAGGTGGTCTGGCCGTCTCGGGTCAGGACGATCAGGTTCGGCTTTTTC
TTCAACCAGCCGCTCGCCGGGGTCGTGTTCCCTGCGTCGCTGGAAGAGGT
CGTCTTCGGCCGGAGCTTCGACCAGCCCGTCGACGGCACCGACTGGCCCG
AGTCCCTTCGGCGCCTGCACCTGGACCGGCACTTCCGCCACCCGCTGGAC
GGCCTCCAGGTGGCGTGGCCGGCCTACCTGCGGCGGCTACACCTCGGGCA
CAGCTTCAACCAACCGATCGCCGAGGTCTCGTGGCCCGCCTCTCTTCGCG
AGCTCACGTTCGGGAACTGGTTCAACCAGAGGCTGGACGGGGTCGCTCTA
CCGTCGTGCCTGGAGCAGCTCGCGTTCGGCCGGGCCTTCGACCAGCCCAT
CGCCGGGGTCGCCTTCCCGGCTTCCCTCCGCCGGATCACGTTCGGCAGCG
GCTTCACGCAGCCCGTCGTCCCCGTGTCGTGGCCGGCGTCCCTGCGGCAG
CTGGTGTTCGGGTTCTACTTCAACAGGCCCATCGCGGGGATCTCCCTGCC
GATCTCCCTCCAGCGCGTCACGTTCGGCGAGAGGTTCAACCAGCCGGTGG
CCGGGGTCGCGTGGCCGGCCTCGCTGAAAGAGCTGGAGTTCGTCAGGGAC
TTCAACCACCCCGTCGACCGGGCGGCCTGGCCGAGCTCGCTGGAGGTCCT
GTCCTTCGGCAAGGGCTTCGACCAGCCGATAGAGGACGCTGCGCTCCCGG
GGTCGCTGCGGCACATCAGCTTCGGCGCGCGGTTTAACCAGGCGGTGGTT
CGGGCGGCGTGGCCGGTGTCGCTTCAGAGCGTTACGTTCGGGGAGAGGTT
CGACCGGCCCTTGGAGGGGATCAGGTGGCCAGCCTCGCTGCGACGGGTCT
CGCTCGGCCGGGACTTCAACCAGCCCATCGGGCGAGTGGCCTGGCCCCGG
TCCCTTCGGCTCCTGACCTTCGGAGACAAGTTCGACCAGCCGATCCCGGA
AGGGCCGGCAGGGGCGGCCGGTGGCGGCTGCTTCGGGTGGCCCGATTCGC
TGGAGGGGGTGTCGTTCGGGAAGCGGTTCGACCGGCCCATCGCCGGGGTC
TCCTGGGGGGCCTCGCTGAAGAGGATGGCGTTCGGGGAGCGGTTCAACCG
GCCGATCGTCGGGGTCGCGTGGCCCCCGTCGCTGCGGCTGCTGACCTTCG
GGGCGTGCTTCAACCAGAGCGTGGACGGGGTCGCCTTCCCGGACTCGGTG
GAGGAGATCGTCTTCGGTTACGAGTTCGACCGCGGCGTGTCGCGGACCGC
CTGGCCCGCGTCTCTCCGGCGGATCACGTTCATGGGCAACTTTAACCAGC
CCGTCTCGGAGGTGGTCTGGCCGTCTCGGGTCAGGACGATCAGGTTCGGC
TTTTTCTTCAACCAGCCGCTCGCCGGGGTCGTGTTCCCTGCGTCGCTGGA
AGAGGTCGTCTTCGGCCGGAGCTTCGACCAGCCCGTCGACGGCACCGACT
GGCCCGAGTCCCTTCGGCGCCTGCACCTGGACCGGCACTTCCGCCACCCG
CTGGACGGCCTC
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