mRNA_L-elsbetiae_contig13762.2853.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: D7FIL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL7_ECTSI) HSP 1 Score: 211 bits (538), Expect = 1.020e-61 Identity = 149/349 (42.69%), Postives = 184/349 (52.72%), Query Frame = 1 Query: 1 LLHAFYKWSCQEFSEPVRPAPAQVVPDLIH-------------------------------------GGVAAAERLLAAQGGTAGGRTERML-------WQKEQD-----ELRARQEKLQXXXXXXXXXXLFLLRQRHWHDPVDSLSYEGALQLY--LKERNLRAHEEAHVSIVHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEVHSV--VSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARKRGQQTVQRMKGHGGWTVDVFFTPVRGAG 888 +LH+FYKWSC+EFSEPV P PA VVPD++ GG AAA +++ GG+ G L Q E+D E R QE + LL Q H H+PVDSLSYEG L+ RN + + + S SWINET+ SLL+TAAGDGVVR W V+EA ADE P LVTA++A+PD+ G + T WQQRRGLLSAAG+S + VWDM SEQ+W QWEV VSAL A D GPLGGW++AAG T+G VLL+DAR+RG V +M + VD+FF P G G Sbjct: 1 MLHSFYKWSCREFSEPVTPPPAPVVPDVVDLAAPGKKXXXXXXXQQQGGAADFFAGLSPGRGPAAAWGGEAAAVGMMSV-GGSMGNPAMPPLSSSPYFAQQYEEDKQSAHEARKEQELQRQKRELQELRERQLLLQHHRHEPVDSLSYEGGHHLHGSFSNRNRKG------TRMTSVSWINETDISLLLTAAGDGVVRVWGDVMEA-------GADEGRSPD-LVTAFRALPDLEQNPGGPG-LATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMNRLRNYVVDLFF-PEEGTG 332
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: A0A6H5KBF0_9PHAE (Raptor_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF0_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.670e-42 Identity = 95/174 (54.60%), Postives = 114/174 (65.52%), Query Frame = 1 Query: 373 SASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEVHSV--VSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARKRGQQTVQRMKGHGGWTVDVFFTPVRGAG 888 S SWINET+ SLL+TAAGDGVVR W V+EA ADE P LVTA++A+PD+ G + T WQQRRGLLSAAG+S + VWDM SEQ+W QWEV VSAL A D GPLGGW++AAG T+G VLL+DAR+RG V +M + VD+FF P G G Sbjct: 1800 SVSWINETDNSLLLTAAGDGVVRVWGDVMEA-------GADEGRSPD-LVTAFRALPDLEQD-QGGPGLATHWQQRRGLLSAAGASRHLNVWDMGSEQMWKQWEVPEQCNVSALRAPSDNSPGPLGGWMIAAGMTDGNVLLYDARERGVSAVHKMMRLRNYVVDLFF-PEEGTG 1963
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: A0A1Z5JAI2_FISSO (Regulatory associated protein of mTOR n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAI2_FISSO) HSP 1 Score: 80.5 bits (197), Expect = 4.000e-13 Identity = 56/166 (33.73%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 367 VHSASWINETN-RSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEVHSV--VSALGAAPDV---GGGPLGGWVMAAGTTEGEVLLFDARKRGQQTVQRM-KGHG 843 + S WINE + +S+++ + DG VR W G+++ G + LVTA+ A+P P G +V EWQ +G L AGSS F+R WD+ SEQ+ + E H+ ++ L +A D LG ++ AG ++G + ++D R R +T Q + GHG Sbjct: 1299 ITSCCWINEKSCKSMVLVGSDDGAVRLWGGMIDEIGRPTGTTS--------LVTAFSALPMSLPVNSGSG-LVCEWQSEKGRLITAGSSQFLRSWDVESEQISVELETHTTSHITTLTSAYDPFMSSSSGLGPDIIVAGLSDGALRIYDIRSR--RTAQELHSGHG 1453
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: A0A7S3Q1Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1Z5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 9.390e-13 Identity = 54/166 (32.53%), Postives = 81/166 (48.80%), Query Frame = 1 Query: 367 VHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWS---------------QWE-VHSVVSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARKRGQQ 816 + S SWINE NR+ L++ DG VR W VL + D A E L +A+ A+P++ P ++ EWQQ G L A G++ F+R WD+ SE+L + W+ VH+ +A G + +G V+ G +G V +FD R R +Q Sbjct: 1002 ITSMSWINERNRTKLLSGCDDGSVRIWDKVLTQCSSDDDHAKPE------LASAFYALPELEPGNKRKSGLIAEWQQSEGRLIAGGATKFIRCWDLESEKLTTCIDTNISFDLTAFTTAWDYVHNESAASGFSG------IGPDVLVGGFGDGTVKVFDLRVREKQ 1155
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: E0VU38_PEDHC (Regulatory-associated protein of mTOR, putative n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VU38_PEDHC) HSP 1 Score: 68.2 bits (165), Expect = 4.880e-9 Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 340 AHEEAHVSIVHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPA---VDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEVH----SVVSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARKRGQQT-VQRMKGHGGWTVDVFF 867 +++ A S + + ++N + +LL+ + DG VR WS L + + P LVTA+QA+PD+TP+ V+G +V WQQ L AG + +R WD +E+ ++H S V+++ + P ++ G +G V LFD R Q V + H W V V Sbjct: 1003 SNKAAKGSRITAMQFVNVHDVTLLLNGSDDGTVRLWSNYLPREN-----------REPELVTAWQALPDVTPSNRSVNGGAGIVMVWQQESQQLVVAGDTSKIRFWD--AEKELKIVDLHTGTESCVTSISSDPSCSN------LVVVGCGDGSVRLFDRRLSPQDARVMTWREHSAWVVGVHL 1167
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: A0A7M7K117_VARDE (Raptor_N domain-containing protein n=5 Tax=Varroa TaxID=62624 RepID=A0A7M7K117_VARDE) HSP 1 Score: 60.1 bits (144), Expect = 2.290e-6 Identity = 46/140 (32.86%), Postives = 65/140 (46.43%), Query Frame = 1 Query: 397 NRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVC--MVTEWQQRRGLLSAAGSSPFVRVWDMASEQ--LWSQWEVHSVVSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARK 804 +R LL TA+ DG VRAW+ A + + E +P LVTA+ D C ++ +W Q R L G VR+WDMA+E+ L + S V + GG ++A GT +G V L+D RK Sbjct: 1291 DRCLLFTASTDGAVRAWANTYSAYYNQ---SPTESPEPVELVTAFNCALDAAEMQTTLKCAGILLDWDQARNQLVTCGDLKVVRIWDMAAERRLLDITLDADSPVRCVSLDRTAGGS-----LLAIGTIDGYVKLYDRRK 1422
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Match: A0A1E3QFU2_LIPST (Raptor_N domain-containing protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QFU2_LIPST) HSP 1 Score: 55.1 bits (131), Expect = 9.530e-5 Identity = 42/168 (25.00%), Postives = 76/168 (45.24%), Query Frame = 1 Query: 367 VHSASWINETNRSLLITAAGDGVVRAWSGVLEAQTDLDGGAADEKMQPPVLVTAYQAVPDITPAVDGDVCMVTEWQQRRGLLSAAGSSPFVRVWDMASEQLWSQWEVHSVVSALGAAPDVGGGPLGGWVMAAGTTEGEVLLFDARKRGQQTVQRM-KGHGGWTVDVFF 867 + A INE + LL+T AGDGV+R + E++ ++ L A++A+ D+ P+ + +V +WQQ RG + G +R+WD E + S D + G + AG +G + ++D R ++ + ++ K H W ++V Sbjct: 1088 ITEAKLINEDDVPLLMTGAGDGVIRLYRNY-ESEDRIE------------LACAWRALTDMLPS-NKSSGLVADWQQGRGTMLVGGDVKVIRLWDAPRELCMADIPARSGSPITSLTSD----QVAGHIFIAGFGDGALRVYDRRIDPREAMVKVWKYHKSWVLNVHM 1237 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13762.2853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13762.2853.1 >prot_L-elsbetiae_contig13762.2853.1 ID=prot_L-elsbetiae_contig13762.2853.1|Name=mRNA_L-elsbetiae_contig13762.2853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp LLHAFYKWSCQEFSEPVRPAPAQVVPDLIHGGVAAAERLLAAQGGTAGGRback to top mRNA from alignment at L-elsbetiae_contig13762:605..4594+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13762.2853.1 ID=mRNA_L-elsbetiae_contig13762.2853.1|Name=mRNA_L-elsbetiae_contig13762.2853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3990bp|location=Sequence derived from alignment at L-elsbetiae_contig13762:605..4594+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13762:605..4594+ >mRNA_L-elsbetiae_contig13762.2853.1 ID=mRNA_L-elsbetiae_contig13762.2853.1|Name=mRNA_L-elsbetiae_contig13762.2853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1788bp|location=Sequence derived from alignment at L-elsbetiae_contig13762:605..4594+ (Laminarionema elsbetiae ELsaHSoW15)back to top |