mRNA_L-elsbetiae_contig13749.2842.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 4.610e-151 Identity = 202/311 (64.95%), Postives = 253/311 (81.35%), Query Frame = 1 Query: 1 MAPWRREGYHGWYFDRRSDPVHSNSAGLPVFSTALTCQADTFNYFTLAGKLFSVNVTYVALGCLSPALLRRLRSWQLASLGVPGAAWEMDVLPLMKIIRKLQHGCKTDIATADKQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 M PWR++GYHGW+FDRR+ VH+N GLPVFST L C +D FNYF+L+GK +SVN T+V LGCLSPALLRRLRSW LA+LG+PGAAWE+DVLPLMKIIR LQ+GCK +IA DKQTITALVRMGL++A LDSPMHS WTNQK+HN T R CQAC V R DLGN +YD+VKNA SA+ L+++LA +A+ +K+ ++ +S +LG V+P Y NPLDEV FDRVEGCGMD+LHQ ALN +++ ++LD L+ G+ +VR RFAWRRM PN+SP+ T+ GG+AALTGQ+LWLVSS+FPFL+AP+F P+ L Sbjct: 1 MTPWRQQGYHGWFFDRRASGVHANLTGLPVFSTGLACSSDAFNYFSLSGKRYSVNATFVGLGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 311
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 289 bits (739), Expect = 1.880e-90 Identity = 135/217 (62.21%), Postives = 173/217 (79.72%), Query Frame = 1 Query: 283 MKIIRKLQHGCKTDIATADKQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 MKIIR+LQ+GCK + + DKQT+TALVR+GL++A LDSP+HS WTNQK+HN T R CQAC V R DLGN KYD+VKNA +A+ L+++L+R+AAT+KK DR LS +LG V+P Y NP DEV FDRVEGCGMDILHQ ALN +++ +++D L+ G+ +VRARFAW RM PN+SP+ T+ GG++ALTGQ+LWLVSS FPFLLAP+F SP +L Sbjct: 1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNL 217
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.080e-67 Identity = 117/252 (46.43%), Postives = 153/252 (60.71%), Query Frame = 1 Query: 340 KQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMD--------------------------------------------------ILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSLVSKS 945 + + ALVR+GL++A LDSPMHS W NQK+HN T CQAC V R DLGN KYD+VKNA +A+ LK++L R+AAT+KK DR LS +LG V+P Y NPL EV DRV+GCGMD + + ALN +++ +++D L+ GT +VRARFAWRRM PN+SP+ T+ GG +ALTGQ+LWLV+S+FPFLLAP+F SP +LVS + Sbjct: 17 QDNVEALVRLGLLTANLDSPMHSLWANQKHHNAKT--TCQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMDGTQMPQVHIGRVADLVSQFSYTHKRDHIALLICSQNEQSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLVSTA 266
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE) HSP 1 Score: 209 bits (532), Expect = 9.310e-59 Identity = 116/315 (36.83%), Postives = 153/315 (48.57%), Query Frame = 1 Query: 1 MAPWRREGYHGWYFDRRSDPVHSNSAGLPVFSTALTCQADTFNYFTLAGKLFSVNVTYVALGCLSPALLRRLRSWQLASLGVPGAAWEMDVLPLMKIIRKLQHGCKTDIATADKQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSLVSKS 945 MAPW ++GYHG +FD+R+ VH N AGLPV S + C +D FNYF+L+G+ +SVN T+V GC+SP LLRR R W LA+LG+PGAAWE+D+LPLMKIIR+LQ+GCK +I+ K T+T MG V +D L+ G+ +VRARFAWRRM N+SP+ T+ GG++ALTGQ+LW+VSS+FPFLLAP+F SP +LVS + Sbjct: 487 MAPWTKQGYHGRFFDQRASGVHKNLAGLPVISAGIACSSDDFNYFSLSGRKYSVNATFVGCGCMSPTLLRRPRPWYLATLGLPGAAWELDILPLMKIIRRLQNGCKAEISVGTKLTVTI---MGFV----------------------------------------------------------------------------------------------------------------------MDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSPDNLVSTA 680
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 168 bits (425), Expect = 3.860e-45 Identity = 76/135 (56.30%), Postives = 104/135 (77.04%), Query Frame = 1 Query: 529 ESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 + L+++LA +A+ KKK + +S +LG V+P Y NPLDEV FDRVEGCGMD+LHQ ALN +++ ++LD L+ G+ +VR RFAWRRM PN+SP+ T+ GG+AALTGQ+LWLVSS+FPFL+AP+F P+ L Sbjct: 72 DGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 206
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.700e-41 Identity = 86/178 (48.31%), Postives = 106/178 (59.55%), Query Frame = 1 Query: 400 MHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDEVHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 MHS W NQK+HN T R CQAC V R DLGN KYD+ DR LS +LG V+P Y NPLDEV FDRVEGCGMDILHQ ALN +++ +++D L+ G+ +V P+I T+ GG +ALTGQ+LWLVSS+ PFLLAP+F SP +L Sbjct: 1 MHSLWANQKHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIV-----------PDI------TSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNL 138
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE) HSP 1 Score: 126 bits (316), Expect = 2.840e-32 Identity = 56/82 (68.29%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 109 CQADTFNYFTLAGKLFSVNVTYVALGCLSPALLRRLRSWQLASLGVPGAAWEMDVLPLMKIIRKLQHGCKTDIATADKQTIT 354 C +D FNYF+L+G+ SV+ T+V LGCLSP LLRRLRSW LA+LG+PGAAWE+D+LPLM+IIR LQ+GCKT+I+ DKQT+T Sbjct: 59 CSSDAFNYFSLSGRKHSVSATFVGLGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGDKQTVT 140
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI) HSP 1 Score: 135 bits (339), Expect = 1.210e-31 Identity = 91/316 (28.80%), Postives = 145/316 (45.89%), Query Frame = 1 Query: 1 MAPWRREGYHGWYFDRRSDPVH-SNSAGLPVFSTALTCQADTFNYFTLAGKLFSVNVTYVA-LGCLSPALLRRLRSWQLASLGVPGAAWEMDVLPLMKIIRKLQHGCKTDIATADKQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDE-VHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDV-GTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSLV 936 + P + G ++DRR + H +N VF T D F++ G + + T ++ S A R+ +W L L P W+ D+ ++++I LQ GC+ +A ADK R+GL+ DSP K T C C + + DL + YD+V+N + + + L ++ T R ALS G NP + VH + V G+D+ HQDA N +R++ + LL L G L+ ++ PL F + GGF+AL+G ++W +SSV + PV S +S+V Sbjct: 447 IFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKATLLSPFASTSQAFRRQPGAWPLVGLSAPRVRWQDDLGFILEVISVLQKGCRARLAIADKVE-EVFFRLGLLLCDADSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMV 761
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 9.640e-20 Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 682 ILHQDALNVVRRLPRYLLDCLEDVGTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 +L Q ALN +++ ++LD L+ + +VR RFAWRRM N+ P+ T+ GG+AALTGQ+LWLVSS+FPFL+AP+F P+ L Sbjct: 4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 87
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 1.580e-12 Identity = 79/312 (25.32%), Postives = 122/312 (39.10%), Query Frame = 1 Query: 7 PWRREGYHGWYFDRRSDPVH-SNSAGLPVFSTALTCQADTFNYFTLAGKLFSVNVTYVALGCLSPALLRRLRSWQLASLGVPGAAWEMDVLPLMKIIRKLQHGCKTDIATADKQTITALVRMGLVSAGLDSPMHSAWTNQKYHNGSTYRCCQACKVTRGDLGNHKYDVVKNASSAESLKKNLARLAATKKKTDRTALSMSLGAVLPMYRNPLDE-VHFDRVEGCGMDILHQDALNVVRRLPRYLLDCLEDV-GTALVRARFAWRRMQAPNISPLGPFTTPGGFAALTGQELWLVSSVFPFLLAPVFGSPSSL 933 PWR EG ++DRR + H +N VF T D F++ G + + T LL S A PGA W + L ++ + G ++ + G R A KV DL + YD+V+N + + + L ++ T R ALS G NP + VH + V G+D+ HQDA N + ++ + LL L G L+ ++ PL F + GGF+AL+G ++W +SSV + PV S +S+ Sbjct: 397 PWRPEGAERLFYDRRQNGSHWNNDKERRVFLTPAHLFTDAFDFRNQGGVSYPIKAT----------LLSPFASTSQAFRRQPGA-WPLVGLSAPRVRWQDDLGFILEVISV------------------------------LQKGCRARLAIADKVEE-DLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASM 666 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13749.2842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13749.2842.1 >prot_L-elsbetiae_contig13749.2842.1 ID=prot_L-elsbetiae_contig13749.2842.1|Name=mRNA_L-elsbetiae_contig13749.2842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp MAPWRREGYHGWYFDRRSDPVHSNSAGLPVFSTALTCQADTFNYFTLAGKback to top mRNA from alignment at L-elsbetiae_contig13749:2818..4663+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13749.2842.1 ID=mRNA_L-elsbetiae_contig13749.2842.1|Name=mRNA_L-elsbetiae_contig13749.2842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1846bp|location=Sequence derived from alignment at L-elsbetiae_contig13749:2818..4663+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13749:2818..4663+ >mRNA_L-elsbetiae_contig13749.2842.1 ID=mRNA_L-elsbetiae_contig13749.2842.1|Name=mRNA_L-elsbetiae_contig13749.2842.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig13749:2818..4663+ (Laminarionema elsbetiae ELsaHSoW15)back to top |