mRNA_L-elsbetiae_contig13731.2836.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13731.2836.1
Unique NamemRNA_L-elsbetiae_contig13731.2836.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.510e-77
Identity = 148/297 (49.83%), Postives = 202/297 (68.01%), Query Frame = 1
Query:   55 SFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELE----------------IALLSEEELDGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFPSLQ 897
            SF   +A+R +++D+KR  +CAFV G A      +VTV+S+L+FVPG+RVA+AAE   +D YE ++G   GV VS   N   ++LFAD++CG GT LI Y++PGSVLSR FT KDTH+PRGDLLVV+  ++ SY DA++ R +A+VLGFDAPSFT+GTDLMLPVGAN +LR  L                 +AL    E D  ++VPQ+LAAL+Y++ T GV F++PQ WV Q+LF+ +S+W+IPL+KPR+ CAI      P    T A+ L+ +L FF MGG+C NGL+     L+
Sbjct: 1168 SFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASLQHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEPGSPKT-AEVLQSNLDFFSMGGKCANGLIDFVLPLE 1463          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: A0A6H5L4M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.890e-77
Identity = 143/293 (48.81%), Postives = 200/293 (68.26%), Query Frame = 1
Query:   58 FMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEI-------------ALLSEEEL---DGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFP 888
            F   +A+R F +D+KR  +CAFV G        EVTV+S+L+F+PG+RVA+AAE+  +D YE ++G   G  +SS  N+  ++LFAD++CG GT LI Y++PGSVLSR FT KDTH+PRGDLLVV+  +  SY D+++   +A+VLGFDAPSFT+GTDLMLP+G N  LR  L               +L++ EEL   D ++++PQ+LAAL+Y++ T GV FV+PQ WV QNLF+ +S+WD+PL+KPR+ CAI      P    T A+ L+ +L FF  GG+C NGL+ + P
Sbjct:  536 FFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASLQHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNT-ANVLQSNLDFFSKGGKCANGLIDIMP 827          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 5.650e-77
Identity = 146/293 (49.83%), Postives = 200/293 (68.26%), Query Frame = 1
Query:   58 FMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEI-------------ALLSEEEL---DGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFP 888
            F   +A+R +++D+KR  +CAFV G A      EVTV S+L+F+PG+RVA+AAE   +D YE ++G   GV +SS  N   ++LFAD++CG GT LI Y++PGSVLSR FT KDTH+PR DLLVVY  ++ SY DA++   +A+VLGFDAPSFT+GTDLMLPVG N  LR  L +             +L++ +EL   D +++VPQ+LAAL+Y++ T GV FV+PQ WV QNLF+ +S+WD+PL+KPR+ CAI      P    T A+ L+ +L FF  GG+C NGL+   P
Sbjct: 1225 FFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASLQHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPVQLEPGSPNT-AEVLQSNLDFFSKGGKCANGLIDFMP 1516          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.190e-75
Identity = 150/295 (50.85%), Postives = 193/295 (65.42%), Query Frame = 1
Query:   46 EFESFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCG-EGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEIALLSEE-------------ELDGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFP 888
            E   F    + R F EDV+R  +CAFV G A +V Q EVTV SVLEFVPG+RV VAAE  +VD YE AVG   GV VSS  +   +S FADE+CG   T LI+Y++ GSV+SRSFT KDTH+P+GDLLVV+G         ++A  TA VLGF+AP FT GTDL+LPVGANA+LR+    AL SE+             +L   A+VPQ+LAAL Y +   G+ F NPQ WVT +LF+ +S+W+IPL+KPRF C +   ++  E D   AD L+++L FF MGG CE G++ + P
Sbjct:  407 EVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHSG----DLADRTANVLGFEAPPFTTGTDLILPVGANADLRA----ALASEKTVNDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCELDHVSSADESDV--ADILQRNLDFFAMGGTCERGVIAMQP 691          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.280e-75
Identity = 148/295 (50.17%), Postives = 191/295 (64.75%), Query Frame = 1
Query:   55 SFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEI-----------------ALLSEEELDGLASVPQ----LLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLV 876
            SF   +A+R F +D+KRG +CAFV G  D     EVTV+S+L+F+PG+RVA+AA    +D YE ++G   GV +SS  N   +SLFAD  CG GT LI Y++PGSVLSR FT KDTH+PRGDLLVV+G  + SYR+ E +R +  VLG +APSFT GTDLMLPVGAN +LR  L +                 AL    + + ++SVPQ    +LAAL+YA+ T GV F +PQ W  Q LF+ +S+WDIPL KPRF CAI    TL  D    A  L+ +L FF  GG+CE+GL+
Sbjct:  428 SFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIA--LTLEPDSLHAATTLQNNLDFFSRGGKCEDGLI 720          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D7FI38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 4.710e-74
Identity = 148/307 (48.21%), Postives = 195/307 (63.52%), Query Frame = 1
Query:   19 VDADAVGETEFESFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEI-----------------ALLSEEELDGLASVPQ----LLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLV 876
            VD D + E    SF    A+R F +D+KRG +CAFV G  D     EVTV+S+L+F+PG+RVA+AA    +D YE ++G   GV +SS  N   +SLFAD  CG GT LI Y++ GSVLSR FT KDTH+PRGDLLVV+   + SYRD E +R +  VLG +APSFT GTDL+LPVGAN +LR  L +                 AL    + + +++VPQ    +LAAL+YA+ T GV F +P+ WV Q+LF+ +S+WDIPL+KPRF CAI     L  D    A  L+ +L FF  GG+CE+GL+
Sbjct:  359 VDVDGIREGVI-SFFEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRSGLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIA--LALEPDILRAATTLQNNLDFFSRGGKCEDGLI 662          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 3.570e-69
Identity = 142/307 (46.25%), Postives = 198/307 (64.50%), Query Frame = 1
Query:   19 VDADAVGETEFESFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELE-----------------IALLSEEELDGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFP 888
            VD +  G  +   F   +A+R +  +V+RG +CAFV G A      EVTV+S+L+F+PG++VAVAAE   +D YE ++G   GV VS   N   ++L+AD++C   ++LI Y++PGSVLSRSFT KDTH+PRGDLLVV+  ++ SY D E++R +A+VLGF+APSFT GTDLMLP  AN  LR  L                  IAL    + D +++VPQ+LAA++Y++ T GV F++P+ WV QNLF+ +S+WDIPL+KPRF C I     L       A+ L+ S+ FF  GG+C NGL+   P
Sbjct: 1503 VDVEVGGREKAVRFFEAAAERTYLGEVERGNLCAFVSGWAGEEAMWEVTVKSILQFMPGMKVAVAAEAEGLDAYERSMGRLPGVTVSGTQNPATATLYADKYCSF-SELILYVKPGSVLSRSFTSKDTHSPRGDLLVVHAGSQGSYHDTELSRRSASVLGFEAPSFTQGTDLMLPGDANYYLREALGLKIGSDGLQGDGDGDAVIALQKFVDFDQVSAVPQVLAAVAYSRETPGVWFIDPRGWVGQNLFKEASIWDIPLVKPRFTCTIA-ADKLDSASPKTAETLQSSVDFFANGGKCANGLIAAAP 1807          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.470e-68
Identity = 138/302 (45.70%), Postives = 197/302 (65.23%), Query Frame = 1
Query:   34 VGETEFESFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEIALLSE---EELDG--------------LASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGLFP 888
            VG  +   F   +A+R +  ++ RG++CAFV G        EVTV+S+L+F+PG++VA+AAE+  +D YE ++G   GV VS   N   ++LFAD++C   ++LI Y++PGSVLSRSFTPKDTH+PRGDLLVV+  ++ SY D E++  +++VLGF+ PSFT GTDLMLP  AN  +R  L + + SE   E+ DG              +++VPQ+LAA++Y++ T GV FV+P+ WV QNLF+ +S+WDIPL+KPRF C I     L       A  L+ S+ FF  GG+C NGL+   P
Sbjct:  818 VGREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCSF-SELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIAS-DKLDSSSPKTAQVLQNSVVFFANGGKCANGLIADAP 1117          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 2.780e-67
Identity = 150/323 (46.44%), Postives = 194/323 (60.06%), Query Frame = 1
Query:   46 EFESFMRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYES------------------------------AVGFYTGVRVSSAPNAHLSSLFADEHCG-EGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAPSFTYGTDLMLPVGANAELRSELEIALLSEEELDGL-------------ASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATRADALEKSLAFFRMGGRCENGLVGL 882
            E  SF    + R F +DV+RG +CAFV G A +V + EVTV SVLEFVPG+RVAVAAE  +VD YE                               AVG   GV VSS  +   +S FADE+CG   T LIFY++ GSV+SRSFT KDTH+P+GDLLVV+G         ++A  T  VLGF+AP FT GTD++LPVGANAELR+    AL SE+ +D               A+VPQ+LAAL Y +   G+ F NPQ WVT +LF+ +S+W+IPL+KPRF C +   ++  E D   AD L+++L FF MGG CE G++ +
Sbjct:  891 EVSSFFEMESKRPFVDDVERGRLCAFVAGTASQVDEIEVTVSSVLEFVPGMRVAVAAEADAVDAYERCDSMISRLAAFWVARDHYTINRFVANPFRRAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIFYLKTGSVVSRSFTSKDTHSPQGDLLVVFGKGHHG----DVADRTTDVLGFEAPPFTTGTDVILPVGANAELRA----ALASEKTVDDAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTSHLFQDASIWEIPLVKPRFTCELDPSSSADEFDV--ADILQRNLDFFAMGGTCEAGVISM 1203          
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 6.560e-62
Identity = 140/301 (46.51%), Postives = 182/301 (60.47%), Query Frame = 1
Query:   85 FTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAVAAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCG--EGTKLIFYMQPGSVLSRSFTPKDTHTPRGDLLVVYGD-ARKSYRDAEIARETAAVLGFDA-----------PSFTYGTDLMLPVGANAELR---------SELEIALLSEEELDGLASVPQLLAALSYAQGTEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDA--TR--------ADALEKSLAFFRMGGRCENGLVGLFP 888
            FTEDV  G +CAF+ G A  V +  VTV S+ +F PG+RVAVAAE  +V  YE AVG   GV V+S P+A  +SL+AD +CG  + T LI Y+  GS  SR  T KDTH+PRGDLLV +   AR S+  A++A++TA+VL               PSFT+GTDLMLPVGANA+LR         +  + A+ +   LD LA+VPQ LAAL Y++  EGV F++PQ W+++ LF+  S+WDIPL+KPRF CA+        D A  TR        A  L+  L FF  GG C NG +   P
Sbjct:  712 FTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEDAVHLYEWAVGSLPGVTVASTPSALTASLYADRYCGGTKATSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSARASHHVAQLAKQTASVLALSEGSAAPPTVPLPPSFTFGTDLMLPVGANADLRDLFASKGDKAAFQQAVQTLAGLDDLAAVPQALAALQYSRQPEGVWFLDPQAWISEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHDSAGPTRGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDFRP 1012          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13731.2836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI63_ECTSI1.510e-7749.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4M7_9PHAE1.890e-7748.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI39_ECTSI5.650e-7749.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLE5_ECTSI1.190e-7550.85Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L131_9PHAE1.280e-7550.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI38_ECTSI4.710e-7448.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI37_ECTSI3.570e-6946.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LJP6_9PHAE1.470e-6845.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN3_9PHAE2.780e-6746.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR80_ECTSI6.560e-6246.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13731contigL-elsbetiae_contig13731:291..4764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.3
Seed ortholog evalue6.3e-74
Seed eggNOG ortholog2880.D7FI63
Hectar predicted targeting categoryother localisation
EggNOG OGs2D0G2@1,2SE3H@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2696
Cds size840
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13731.2836.1prot_L-elsbetiae_contig13731.2836.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13731 351..2968 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.8449721-UTR-L-elsbetiae_contig13731:290..3501622815535.8449721-UTR-L-elsbetiae_contig13731:290..350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13731 291..350 +
1691682946.1077216-UTR-L-elsbetiae_contig13731:290..3501691682946.1077216-UTR-L-elsbetiae_contig13731:290..350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13731 291..350 +
1622815535.925423-UTR-L-elsbetiae_contig13731:2968..47641622815535.925423-UTR-L-elsbetiae_contig13731:2968..4764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13731 2969..4764 +
1691682946.1582234-UTR-L-elsbetiae_contig13731:2968..47641691682946.1582234-UTR-L-elsbetiae_contig13731:2968..4764Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13731 2969..4764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.86127-CDS-L-elsbetiae_contig13731:350..5351622815535.86127-CDS-L-elsbetiae_contig13731:350..535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 351..535 +
1691682946.1176126-CDS-L-elsbetiae_contig13731:350..5351691682946.1176126-CDS-L-elsbetiae_contig13731:350..535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 351..535 +
1622815535.875617-CDS-L-elsbetiae_contig13731:1009..12531622815535.875617-CDS-L-elsbetiae_contig13731:1009..1253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 1010..1253 +
1691682946.129435-CDS-L-elsbetiae_contig13731:1009..12531691682946.129435-CDS-L-elsbetiae_contig13731:1009..1253Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 1010..1253 +
1622815535.8927221-CDS-L-elsbetiae_contig13731:2069..22101622815535.8927221-CDS-L-elsbetiae_contig13731:2069..2210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 2070..2210 +
1691682946.139675-CDS-L-elsbetiae_contig13731:2069..22101691682946.139675-CDS-L-elsbetiae_contig13731:2069..2210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 2070..2210 +
1622815535.9087553-CDS-L-elsbetiae_contig13731:2698..29681622815535.9087553-CDS-L-elsbetiae_contig13731:2698..2968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 2699..2968 +
1691682946.1493838-CDS-L-elsbetiae_contig13731:2698..29681691682946.1493838-CDS-L-elsbetiae_contig13731:2698..2968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13731 2699..2968 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13731.2836.1

>prot_L-elsbetiae_contig13731.2836.1 ID=prot_L-elsbetiae_contig13731.2836.1|Name=mRNA_L-elsbetiae_contig13731.2836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MRRSADRFFTEDVKRGEICAFVEGHADRVLQAEVTVQSVLEFVPGVRVAV
AAETGSVDDYESAVGFYTGVRVSSAPNAHLSSLFADEHCGEGTKLIFYMQ
PGSVLSRSFTPKDTHTPRGDLLVVYGDARKSYRDAEIARETAAVLGFDAP
SFTYGTDLMLPVGANAELRSELEIALLSEEELDGLASVPQLLAALSYAQG
TEGVRFVNPQTWVTQNLFRASSVWDIPLMKPRFACAIPDRTTLPEDDATR
ADALEKSLAFFRMGGRCENGLVGLFPSLQ*
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mRNA from alignment at L-elsbetiae_contig13731:291..4764+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13731.2836.1 ID=mRNA_L-elsbetiae_contig13731.2836.1|Name=mRNA_L-elsbetiae_contig13731.2836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4474bp|location=Sequence derived from alignment at L-elsbetiae_contig13731:291..4764+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGCGGTGGGCGCAGACGTGGACGCGGACGCGGTGGGCGAGACGGAGTT CGAGTCCTTCATGCGCCGCTCCGCGGACAGGTTCTTCACCGAGGACGTGA AGCGCGGCGAGATCTGCGCTTTCGTGGAGGGCCACGCCGACCGCGTCCTG CAGGCCGAAGTGACCGTGCAGAGCGTCCTCGAGTTCGTGCCCGGAGTGCG GGTGGCTGTCGCCGCCGAGACGGGCAGCGTCGACGATTACGAGAGGTAAG TCCCGTTGCTGCAGCTGGTGGTGTTGTTGTTGTTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCCTCTTGTTGCCGCAGCTGGTGTTTACGTGTCATA CATGATGCTGCGCGAAAACGTGGTGCTTTTTTTATTTTAAGGCTCATTAG ACTATCTACGGCAGCACTCAAATGAGAACATGGGGGGCTTATTCGTAGCG GGTGCACGCACGTGAAAATCCGCCCCTCTGTCCTGTTGTAGACGCTTCGT ATCCGGCTGGAAGAAGCCGGGAGGGAAGGGGTGGCTCTTGAATACGCCGG CGCGCTCGCGTTATCCTTACTTCTCCAACACAACAGAAATATACTTGTTT GGTCATACAATACACGTGTATCAAATATTTTCAGCATTGTCCAGCATCCA AAACATCAGTATCTCAACCCCGCCGCCCTCCCGTCGATGATATCCTCCCC GCACCCCCACTGAGAATAGCGCGGTCGGGTTCTACACCGGCGTGCGGGTC TCGAGCGCCCCCAACGCCCACCTCTCCAGCCTGTTCGCCGATGAGCACTG CGGCGAGGGGACCAAGCTCATTTTTTATATGCAGCCCGGCTCTGTGCTGT CGCGCAGCTTCACCCCCAAGGACACCCACACGCCCCGCGGAGACCTCCTT GTTGTCTACGGGGACGCCCGCAAGTCTTACCGCGACGCGGAGATCGCCCG GGAGACCGCGGCGGTGAGCATTTTGTGAAGAATTTCCCTCCAAATAGAAA GAAACAATACCACTGCGGTTACGACGCAGCTACCGAAACGGTACGCTGTT CTAAACTTACTCGGACCCTCGTCCAACAACTGGTAAACGTGTGGGTATCC ATAGGAAAAAAACAAACTCCACCACCGCATTTTCATATTTTCCCATTTTA TTCTATTTTTCTCATTTTTTTTTTTCCATTACTGGCTTGTTCGTTGTCTG CCCCACTGGCCCCCTCCCTTTCTCCACTACGACAAGCTAGACGACCCAAC CGGGGTTCACACAGCAGTGTGAACACGGAAATCGATTGCGTCAGCTTTTG GATCAACAGTAGCGCTCAAGTTCCGCGTTCTGTTCTCGCCTTGACCACCA ATGCCGGGGGTTTTGAGCTGACTTACTTTTTTGTTTCATGTACCTTTTCA TCTGTTTCCCTGAAACGGGTTTGTAGCGCACTCTGCATTGGCGAGGCATC GAGTTTGCTTCCAGCAATTCCGCGTTTGAAGCAGTCGCAGGCAGCGCGAT CTCTGCTGGCACACCTGTTCTGTAGTGGGTGGTGTGTAGGGTGCGCAGCG TGATGCACAGGTACGACGGATAAGTTTTTGTTTTTAGTTCGATAAAATAA AACCACGTTGACTCACACTGTCCTGAGCAGCAGCGGCAGGCCCAAGCTGT TCTGATAATTATCACCTAGGAGTTTTAAAAAAAAAGCTTATTAGACTACT GACCAAACAACCCCTTACTCCCAACACCACAAACATCCCTCGGCGTGATG CTGCTGTGCTTGCTCGGTCTTCGTCTCAGGTGCTCGGGTTCGATGCCCCT TCCTTCACGTACGGCACCGACCTCATGCTGCCTGTCGGCGCCAACGCGGA GCTGCGATCCGAGCTGGAGATAGCCCTTCTCTCGGAGGAGGAGCTTGACG GACTTGCCTCTGTGCCCCAGGTCAGTTTTATTGGCCAACACGCGGCTGGA AAAAAGTACCCATTGGATGCCATATCCACTGGAGCTGTATATATACTTCG AAGTATATGTACGGGAGAATAGAAGCGGAGTCTATGGACACATGACGCCC GCGTCAGAGCCGTGAAAACCACACAAACACACCAAAAAATCGTTTTTCTT CCTCCCTGAATCACATCTTCGGGGACTGCTGATTATCCTGTCTCATCGCC GAAGCACCAACCACAACCACGTCTGGACCTTACCCACGGCGACGACACAC TCACACACACATAAACCCCCTACAATTCNNNNNNNNNNCCCCCCTGGATC ACCACATCGGGGGCTTCCTTTTTTCCTTCCTCTTCGCCGAAGCACCCACC AACCCCCCTGCGCGCTCTTCCCCCCCCCCCCCCCCACCCTTCTGCATTAT GTATTACTCCGAATGGGCGGGCCCGAAATATAAAACGAAAACACGACATC AATTGCAGCTCCTGGCGGCGCTCTCGTACGCCCAAGGCACCGAGGGAGTC CGCTTCGTCAATCCGCAGACCTGGGTCACCCAGAACCTCTTCAGGGCCTC CTCCGTCTGGGACATCCCCCTCATGAAGCCGCGCTTCGCGTGCGCCATCC CGGACCGGACTACCCTCCCGGAGGACGACGCCACGCGGGCCGACGCCCTG GAGAAAAGCCTTGCGTTTTTCCGGATGGGGGGGCGTTGCGAGAACGGTCT CGTGGGCCTATTTCCCTCCCTGCAATAGACCTACCTGAGGGCGAGAGACG GACGGGCCTGGGCCCGTGCATTGTTACGGGCTGATTCTGATCGGATTGAT CTGTCAAGTGGTCGGTGTCGCCTCTGGTGGTGATTGGGGGGGGGGCGGAG CGGGTTGGCAAAAAACGATGTTTTTTTCCCCGCCTGTGTTGGCGCGGGGC GGGGGGTGGTGAAAAGCAAACTCTCGACTTGTTTTTGTCCCCCCCCCCCC ACCTGTGTGTTCCGTTTCGCGGTGCGGCTCCATGACTCCCGGCCGACCGC GGCATCTACCTGTGCGTGGTCTTGGAGATGGGAGTTTTGTTTCGGACCGC GGGTGACCGCCTATTCCTGTACTGCTATAGGCCCTGTAGGGAGTACCGCG TGTTTTTTCGCCACGTTTTTGCGTGGCGGATGTGGGAAAGAAAAGTTCCC GGTTTCTGTTGTTGCAGTCGCGTGTGGTGGTACCTTGCACCGAGTTTTGA GAGGAGGCTTTGCACCGGGTTTTGATAGGAAACGCATGTAGTGAGGCAGA GGAGGCTGGAGGTGCGTCACGTGCACGCGTTTTTCGTCTCTGGTTATGAT GCTATGTTCCGCTGAAGACCGCCAACGGTGCTGGTTGACTCGCTTTCGGG TTCCGAGCATGGCTTTTTTTGGTGGAGGTGACCACGGTGAGCATATTTTT TTTATTTGTTTCGTTGTGTGCTGTGTACGATACTCGTGCGTGGTATTTTA TTCTAAACGTACATACTTGTACCCTGCGGAAAACCTGTGATCCAATGACA GGGCTTTATACCATAGTCATTCGTTGTGTGACTCGCCGTTGTTGCCTCTG GCGGAGCCGACTGGATAGGTGAGCGTGACTAAACCTGGTTCCGCCAGTCA TACATACCGCTACTACTGTGCCCGGACACTTGCCTCACCCAGTACAGAGG GAGCACACGCGAACCCTATAGACTGGTATTTTATGTTGTGTAGTCCCACT TGCAAGAAAAGTGAAACAAGCGTAACGGGATTAAGGGGTTTTTGCATTTT TCAGCCATTGGGTTCATTTTTTCAGATTTTTTGGTGGGAGGCATGAGAGT GGGGGGTCTTAGATCTGATGGAACAAAAAAAAGAGGGCGAAAATGTTGTT GCAATTTCATTCCATGCCTTTGTTTTATTTTCTGTATTGTACAGCAACCC CCGAGAGCGTGGGAAATGAACTCAAGTTTTGTGTCTAGGCAGCCCAACGG AGCAAAGCACGGAAGTACCGCAGGTCATTGATTCGTCCCGGGTTTGGGCG CCACGAAGAAATCGAGGGTGGGCACTTCGGGGACTGTTTTTTAACGGGGA AATTAGTCTATATATTGTTGGAGACCCTTTGTTTGTCGTTGGTGCTGTTG GTAGTGTGCATCGAGAACGTTTCATGCCCATCGTATGCCCGACGTCGTCT ACGACACAGCTCCGCTCATCGCATAGTATTACGTAAGAACGTCGTTGTGC CCAACTGAAAGCATTTTTGCGTCTCAAAGATCCGGCTTGTACCATTCATT GCAGCAGTACCGTATTTTAGTCTGGGGTTCGGTCGATCCAGGGTTCATTT TAATGTGGTGTGATGTACGCTGCATCTGGAATATGTTGGCTTGTGGCTGA AGGCAGCAAAATATCATCTCCAGACGAGGAGGGCACACTAAATCTCGACA TGGCGGTACGGATGTGCGGCGCACTTTAGGTGGTGCATAATCTCTTCTGC TGCCAGGGTACATAGCGCAGGAGTGGGGGGGGGGGCACGGTCAACACTTA ATCAACCTTCTTCGTGACTTGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13731:291..4764+

>mRNA_L-elsbetiae_contig13731.2836.1 ID=mRNA_L-elsbetiae_contig13731.2836.1|Name=mRNA_L-elsbetiae_contig13731.2836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig13731:291..4764+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCCGCTCCGCGGACAGGTTCTTCACCGAGGACGTGAAGCGCGGCGA
GATCTGCGCTTTCGTGGAGGGCCACGCCGACCGCGTCCTGCAGGCCGAAG
TGACCGTGCAGAGCGTCCTCGAGTTCGTGCCCGGAGTGCGGGTGGCTGTC
GCCGCCGAGACGGGCAGCGTCGACGATTACGAGAGATGCGCCGCTCCGCG
GACAGGTTCTTCACCGAGGACGTGAAGCGCGGCGAGATCTGCGCTTTCGT
GGAGGGCCACGCCGACCGCGTCCTGCAGGCCGAAGTGACCGTGCAGAGCG
TCCTCGAGTTCGTGCCCGGAGTGCGGGTGGCTGTCGCCGCCGAGACGGGC
AGCGTCGACGATTACGAGAGCGCGGTCGGGTTCTACACCGGCGTGCGGGT
CTCGAGCGCCCCCAACGCCCACCTCTCCAGCCTGTTCGCCGATGAGCACT
GCGGCGAGGGGACCAAGCTCATTTTTTATATGCAGCCCGGCTCTGTGCTG
TCGCGCAGCTTCACCCCCAAGGACACCCACACGCCCCGCGGAGACCTCCT
TGTTGTCTACGGGGACGCCCGCAAGTCTTACCGCGACGCGGAGATCGCCC
GGGAGACCGCGGCGCGCGGTCGGGTTCTACACCGGCGTGCGGGTCTCGAG
CGCCCCCAACGCCCACCTCTCCAGCCTGTTCGCCGATGAGCACTGCGGCG
AGGGGACCAAGCTCATTTTTTATATGCAGCCCGGCTCTGTGCTGTCGCGC
AGCTTCACCCCCAAGGACACCCACACGCCCCGCGGAGACCTCCTTGTTGT
CTACGGGGACGCCCGCAAGTCTTACCGCGACGCGGAGATCGCCCGGGAGA
CCGCGGCGGTGCTCGGGTTCGATGCCCCTTCCTTCACGTACGGCACCGAC
CTCATGCTGCCTGTCGGCGCCAACGCGGAGCTGCGATCCGAGCTGGAGAT
AGCCCTTCTCTCGGAGGAGGAGCTTGACGGACTTGCCTCTGTGCCCCAGG
TGCTCGGGTTCGATGCCCCTTCCTTCACGTACGGCACCGACCTCATGCTG
CCTGTCGGCGCCAACGCGGAGCTGCGATCCGAGCTGGAGATAGCCCTTCT
CTCGGAGGAGGAGCTTGACGGACTTGCCTCTGTGCCCCAGCTCCTGGCGG
CGCTCTCGTACGCCCAAGGCACCGAGGGAGTCCGCTTCGTCAATCCGCAG
ACCTGGGTCACCCAGAACCTCTTCAGGGCCTCCTCCGTCTGGGACATCCC
CCTCATGAAGCCGCGCTTCGCGTGCGCCATCCCGGACCGGACTACCCTCC
CGGAGGACGACGCCACGCGGGCCGACGCCCTGGAGAAAAGCCTTGCGTTT
TTCCGGATGGGGGGGCGTTGCGAGAACGGTCTCGTGGGCCTATTTCCCTC
CCTGCAATAGCTCCTGGCGGCGCTCTCGTACGCCCAAGGCACCGAGGGAG
TCCGCTTCGTCAATCCGCAGACCTGGGTCACCCAGAACCTCTTCAGGGCC
TCCTCCGTCTGGGACATCCCCCTCATGAAGCCGCGCTTCGCGTGCGCCAT
CCCGGACCGGACTACCCTCCCGGAGGACGACGCCACGCGGGCCGACGCCC
TGGAGAAAAGCCTTGCGTTTTTCCGGATGGGGGGGCGTTGCGAGAACGGT
CTCGTGGGCCTATTTCCCTCCCTGCAATAG
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