mRNA_L-elsbetiae_contig13718.2831.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: D8LL28_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL28_ECTSI) HSP 1 Score: 295 bits (756), Expect = 1.520e-92 Identity = 144/152 (94.74%), Postives = 149/152 (98.03%), Query Frame = 1 Query: 1 DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLGCGRPDED 456 DEEEGFDDAVDDVSYTVYRPKKL IG+PHPDPVVENTSMAAVDPPELWY+LKLQELEGE DVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLEN+LHGRRKHVW+SVGNDLAFDARRDLDDLGCG+PD D Sbjct: 107 DEEEGFDDAVDDVSYTVYRPKKLDIGIPHPDPVVENTSMAAVDPPELWYNLKLQELEGESDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENFLHGRRKHVWISVGNDLAFDARRDLDDLGCGKPDGD 258
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A835ZH69_9STRA (P-loop containing NTP hydrolase pore-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH69_9STRA) HSP 1 Score: 184 bits (467), Expect = 5.170e-53 Identity = 91/142 (64.08%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 19 DDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDG-SRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLGCG 441 ++ +DDVS+ Y+P KL G PHPD VE+ +MAAV PP++WY L LEG DV+ SGKLS LQLE++ YA Q HET LPDG SR GFF+GDGAGVGKGRQLA ++LEN L GR KH+W+SVG DLA DARRDLDD+G G Sbjct: 21 EEDIDDVSFCDYKPVKLAYGRPHPDATVESATMAAVMPPDIWYTPALLSLEGPADVIGSGKLSGLQLESVVYAAQRHETYLPDGVSRGGFFLGDGAGVGKGRQLAAMILENTLRGRNKHIWISVGADLALDARRDLDDIGAG 162
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A0S3SAA4_PHAAN (AAA_34 domain-containing protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3SAA4_PHAAN) HSP 1 Score: 166 bits (419), Expect = 1.080e-47 Identity = 83/145 (57.24%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 1 DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 DE+EG + ++T YRP K+ IG PHPDPVVE +S++AV PPE YD K+++ D+ +S LS LQ+E + YACQ H LP+G+RAGFF+GDGAGVGKGR +AG++ EN+ HGRRK +W+SVG+DL FDARRDLDD+G Sbjct: 161 DEDEG---GMVGETFTDYRPPKVSIGSPHPDPVVETSSLSAVQPPEPTYDPKIKD-----DLERSKTLSCLQIETLVYACQRHLQHLPNGARAGFFVGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVG 297
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: UPI001C352991 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C352991) HSP 1 Score: 163 bits (413), Expect = 5.070e-47 Identity = 78/132 (59.09%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 40 SYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 ++T YRP KL IG PHPDP+VE +S++AV PPE YDLK+++ ++ S LS LQ+E + YACQ H LP G+RAGFFIGDGAGVGKGR +AG++ EN+ HG +K +W+SVG+DL FDARRDLDD+G Sbjct: 154 TFTDYRPPKLSIGPPHPDPIVETSSLSAVQPPEPTYDLKIKD-----ELESSNTLSCLQIETLVYACQRHLHHLPSGARAGFFIGDGAGVGKGRTIAGLIWENWHHGMKKALWISVGSDLKFDARRDLDDVG 280
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A4S4DFJ6_CAMSI (AAA_34 domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4DFJ6_CAMSI) HSP 1 Score: 166 bits (421), Expect = 5.800e-47 Identity = 81/132 (61.36%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 40 SYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 ++T YRP KL IG HPDPVVE +S++AV PPE YDL +++ D+ S LS LQ+E + YACQ H LPDG+RAGFFIGDGAGVGKGR +AG++ EN+ HGRRK +W+SVG+DL FDARRDLDD+G Sbjct: 52 TFTDYRPPKLSIGPSHPDPVVETSSLSAVQPPEPTYDLMIKD-----DLESSEALSCLQIETLVYACQRHVQHLPDGARAGFFIGDGAGVGKGRTIAGLIFENWHHGRRKALWISVGSDLKFDARRDLDDVG 178
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A6N2NE53_SALVM (AAA_34 domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2NE53_SALVM) HSP 1 Score: 163 bits (413), Expect = 1.100e-46 Identity = 79/132 (59.85%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 40 SYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 ++T YRP KL IG PHPDP+VE +S++AV PPE YDLK ++ D+ + LS LQ+E + YACQ H LP+G+RAGFFIGDGAGVGKGR +AG++ EN+ H RRK +W+SVG+DL FDARRDLDD+G Sbjct: 187 TFTDYRPTKLSIGPPHPDPIVETSSLSAVQPPEPIYDLKTKD-----DLESTRALSCLQIETLVYACQRHLQHLPNGARAGFFIGDGAGVGKGRTVAGLIWENWRHARRKALWISVGSDLKFDARRDLDDVG 313
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A0L9V463_PHAAN (AAA_34 domain-containing protein n=2 Tax=Vigna TaxID=3913 RepID=A0A0L9V463_PHAAN) HSP 1 Score: 166 bits (419), Expect = 1.530e-46 Identity = 83/145 (57.24%), Postives = 109/145 (75.17%), Query Frame = 1 Query: 1 DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 DE+EG + ++T YRP K+ IG PHPDPVVE +S++AV PPE YD K+++ D+ +S LS LQ+E + YACQ H LP+G+RAGFF+GDGAGVGKGR +AG++ EN+ HGRRK +W+SVG+DL FDARRDLDD+G Sbjct: 145 DEDEG---GMVGETFTDYRPPKVSIGSPHPDPVVETSSLSAVQPPEPTYDPKIKD-----DLERSKTLSCLQIETLVYACQRHLQHLPNGARAGFFVGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVG 281
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: G7KJ92_MEDTR (p-loop NTP hydrolase pore-1 protein n=3 Tax=Medicago truncatula TaxID=3880 RepID=G7KJ92_MEDTR) HSP 1 Score: 166 bits (419), Expect = 1.600e-46 Identity = 83/145 (57.24%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 1 DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 ++EEG D + ++T YRP KL IG PHPDP+VE +S++AV PPE YD K++ D+ +S LS LQ+E + YACQ H +P G RAGFFIGDGAGVGKGR +AG++ EN+ HGRRK +W+SVG+DL FDARRDLDD+G Sbjct: 97 EQEEG-DGGIAGETFTDYRPSKLSIGSPHPDPIVETSSLSAVQPPEPTYDPKIKN-----DLERSKALSCLQIETLVYACQRHLQHVPSGPRAGFFIGDGAGVGKGRTVAGLIWENWHHGRRKTLWISVGSDLKFDARRDLDDMG 235
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: UPI000C757076 (protein strawberry notch homolog 1-like isoform X1 n=3 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C757076) HSP 1 Score: 164 bits (416), Expect = 1.820e-46 Identity = 76/133 (57.14%), Postives = 103/133 (77.44%), Query Frame = 1 Query: 40 SYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLGC 438 +Y+ Y+P KL++G+ HPDPVVE S+A+V+P ++WY + + E + +++ KLSALQLE+I YA Q HE LPDG+RAGF IGDGAGVGKGR +AG++ ENYL GR++ +WVSV NDL +DA RDL D+GC Sbjct: 180 TYSNYKPTKLNVGLDHPDPVVETASLASVEPADVWYTMSIPE-----ECIQNRKLSALQLESIVYASQQHEQFLPDGTRAGFLIGDGAGVGKGRTIAGVIWENYLKGRKRAIWVSVSNDLKYDAERDLSDIGC 307
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Match: A0A392M0S3_9FABA (Strawberry notch-like protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M0S3_9FABA) HSP 1 Score: 160 bits (405), Expect = 2.380e-46 Identity = 82/145 (56.55%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 1 DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDLKLQELEGEFDVVKSGKLSALQLEAIAYACQAHETRLPDGSRAGFFIGDGAGVGKGRQLAGIMLENYLHGRRKHVWVSVGNDLAFDARRDLDDLG 435 DE+EG + ++T YRP K+ IG PHPDPVVE +S++AV PP+ YD K ++ ++ S LS LQ+E + YACQ H LP+G+RAGFFIGDGAGVGKGR +AG++ EN+ HGRRK +W+SVG+DL FDARRDLDD G Sbjct: 8 DEDEG---GMVGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPDPTYDPKTKD-----NLESSKALSCLQIETVVYACQRHLHHLPNGARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAG 144 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13718.2831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13718.2831.1 >prot_L-elsbetiae_contig13718.2831.1 ID=prot_L-elsbetiae_contig13718.2831.1|Name=mRNA_L-elsbetiae_contig13718.2831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp DEEEGFDDAVDDVSYTVYRPKKLHIGVPHPDPVVENTSMAAVDPPELWYDback to top mRNA from alignment at L-elsbetiae_contig13718:1066..2958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13718.2831.1 ID=mRNA_L-elsbetiae_contig13718.2831.1|Name=mRNA_L-elsbetiae_contig13718.2831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1893bp|location=Sequence derived from alignment at L-elsbetiae_contig13718:1066..2958- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13718:1066..2958- >mRNA_L-elsbetiae_contig13718.2831.1 ID=mRNA_L-elsbetiae_contig13718.2831.1|Name=mRNA_L-elsbetiae_contig13718.2831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig13718:1066..2958- (Laminarionema elsbetiae ELsaHSoW15)back to top |