mRNA_L-elsbetiae_contig1371.2828.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A6H5KCP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP8_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 6.090e-127 Identity = 214/271 (78.97%), Postives = 234/271 (86.35%), Query Frame = 1 Query: 205 NSSPPLLGRHTQGVMVPAEA--------STRSKXXXXXXXPSADVVGDRT--VEPLIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVLDASTIHGSYSLPLHSRGVYDD 987 NSSP LLG Q +M+PAE+ S + S+ GD T VEPLIVFDWDDT+LTSSWIQ N+LLQAGSYD+LPLEVRR+LAQLERSV KC KNAR+LGTVIIITNAESGWVELSAARFFV+VLPLLEGVPVISARSLFE QFPGSPLCWKSAAFAYMMHDHFL+RPQW+QKKVVSIGDSNEEKVAMRIASGQHGTM AK+VKFITGPDPEAL+CQL +VTK+LAS++SS+SDVDIVLDAS IHGSYSLPLHSRGVYDD Sbjct: 45 NSSPALLGLRGQRMMMPAESEPARVAGVSNKHLKHQSCNTESSSGNGDVTNKVEPLIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVAKCFKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMEAKSVKFITGPDPEALACQLDFVTKHLASVLSSNSDVDIVLDASMIHGSYSLPLHSRGVYDD 315
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: D7FZF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF4_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 3.930e-126 Identity = 212/275 (77.09%), Postives = 232/275 (84.36%), Query Frame = 1 Query: 205 NSSPPLLGRHTQGVMVPAEASTRSKXXXXXXXPSADVV------------GD--RTVEPLIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVLDASTIHGSYSLPLHSRGVYDD 987 N SP LLG H Q +M+P S ++ GD VEPLIVFDWDDT+LTSSWIQ N+LLQAGSYD+LPLEVRR+LAQLERSV+KCLKNAR+LGTVIIITNAESGWVELSAARFFV+VLPLLEGVPVISARSLFE QFPGSPLCWKSAAFAYMMHDHFL+RPQW+QKKVVSIGDSNEEKVAMRIASGQHGTMAAK+VKFITGPDPEAL+CQL +VTK+LAS++SS+SDVDIVLDAS IHGSYSLPLHSRGVYDD Sbjct: 14 NLSPALLGLHGQRIMMPGADSEPARVAGGNNKHXXXXXXXXXXXXXXXXNGDLNNKVEPLIVFDWDDTMLTSSWIQVNDLLQAGSYDELPLEVRRDLAQLERSVVKCLKNARRLGTVIIITNAESGWVELSAARFFVNVLPLLEGVPVISARSLFESQFPGSPLCWKSAAFAYMMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMAAKSVKFITGPDPEALACQLDFVTKHLASVLSSNSDVDIVLDASMIHGSYSLPLHSRGVYDD 288
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A7S2CXF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXF5_9STRA) HSP 1 Score: 173 bits (438), Expect = 2.190e-44 Identity = 96/222 (43.24%), Postives = 143/222 (64.41%), Query Frame = 1 Query: 340 LIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFL----DRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVLDASTIHGSYSLPLHSRG-VYDDP 990 +IVFDWDDT++ SSWI +LL S+ DL ++ + LE V CL A ++GTV+IITNAE+GWVE SA RF +LPLL+ + V+SARS +E +PG+PLCWK+AAFA+ + F D Q ++++S GDSNEE+ A++IA+GQ AK++KF+ P+PE L Q+ VT L + S +++D++L +++ G P+ + V D+P Sbjct: 62 VIVFDWDDTLMASSWIDREKLLNTPSFGDLSAPLQEQFGALEEHVGWCLAAALKVGTVVIITNAEAGWVEYSAKRFMPRLLPLLQTMRVVSARSTYERFYPGAPLCWKAAAFAHEANQVFSGAGSDGAQ-AAREIISFGDSNEERTAVKIAAGQLDAT-AKSIKFVDLPNPEQLRKQVETVTSWLTWVCSHTAELDLMLMSNSTSGMAPKPVAATSDVADEP 281
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A835Z397_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z397_9STRA) HSP 1 Score: 162 bits (409), Expect = 7.140e-40 Identity = 81/155 (52.26%), Postives = 116/155 (74.84%), Query Frame = 1 Query: 340 LIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHF-LDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTM 801 L +FDWDDT+L S+++Q ++LLQ E +LA++E + ++ L+ A +LG V+IITNAE+GWVELSA +++ DV+ LL +PV+SARS FE QFPG+PL WK+AAFAY++H+ F LD + VVS+GDS+EEK+A+RIA+GQH T+ Sbjct: 30 LTIFDWDDTLLCSTYVQQSQLLQVSRLSPATAE---QLARVEAAAVRVLRLALKLGPVVIITNAEAGWVELSAEKYYRDVVELLSDIPVVSARSQFESQFPGAPLSWKAAAFAYVLHERFSLDVV--TPRLVVSVGDSDEEKIALRIAAGQHTTI 179
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A836CF50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF50_9STRA) HSP 1 Score: 150 bits (380), Expect = 3.560e-37 Identity = 84/187 (44.92%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 340 LIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFL---DRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASI 891 L +FDWDDT++ SS+IQ Q + + + L+ A+ LG V+IITNAE GWVEL A R+ V LLE +PV+SAR+ FE QFPGSP+ WK+AAFAY++H+ F ++P K VVSIGDS EE+ A+RIA+ QH +++ VKF+ P P AL+ +L VT L ++ Sbjct: 8 LTIFDWDDTLMCSSFIQQT--------------------QYKGAACRALRLAQLLGQVVIITNAEHGWVELCAQRYLRGVNELLEDIPVVSARTRFEAQFPGSPVSWKAAAFAYVLHEQFSAIRNKP----KLVVSIGDSEEERAAVRIAAAQHAMISSCTVKFLPQPMPRALAVELDMVTTQLRAL 170
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: W7U8U2_9STRA (Protein kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8U2_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.320e-35 Identity = 91/215 (42.33%), Postives = 130/215 (60.47%), Query Frame = 1 Query: 301 PSADVV-GDRTV-EPLIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLE-GVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQ----KKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVL 924 P+ADVV G V E ++ DWDDT+ SS++ +L+ D+LP E++R A+LE++ + A + GTV+IITNA++GWVEL ++F ++ +L V V+SARS +E FPG PLCWKSAAFA H L + Q Q K ++S GDS EE+ A++IA+G AK+VKF+ P P L Q+ VT L I + +D+VL Sbjct: 68 PAADVVLGPYAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFA-----HELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVL 277
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A7R9Z9M2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z9M2_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.270e-33 Identity = 82/222 (36.94%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 205 NSSPPLLGRHTQGVMVPAEASTRSKXXXXXXXPSADVVGDRTVEPLIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYV 870 N+ P H M A + SK S+ LI+FDWDDT+++SSW+ N L + + ++P ++L QLE SVI L A++ G V IITNAE+GWVELSA +F V+P+L+G+ V+SARS +E +P SP WK AF ++D + P K ++S GDS E+ A+ + K+VKF+ P E L Q+ V Sbjct: 5 NAHPITSSPHHPITMASAALPSPSKVDDEEKPASSSSSSVHVDNTLIIFDWDDTLMSSSWLAQNGL-RLDTPAEVPAAAVKQLTQLEESVITLLNRAKKYGHVCIITNAETGWVELSAKKFMPAVVPVLDGIHVLSARSTYESMYPDSPADWKVQAFYQKIYDSYKASPADRHKNILSFGDSIHERHAIHKVTATLRAAFTKSVKFVERPTVEQLKRQVDLV 225
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A812JJB3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JJB3_9DINO) HSP 1 Score: 137 bits (345), Expect = 1.320e-32 Identity = 81/200 (40.50%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 343 IVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVLDASTIH 942 IV D+DDT+L SSW+ N L G+ + +P E + +L L S LK A Q G VIIITNAE+GWVELSA +F +LPLL V VISARS FE + P WK AAF+ + F K ++S+GDS E+ A+R + H ++ AK+VK + P E L QL V +V+ +D++L ++ Sbjct: 42 IVLDYDDTLLASSWLAQNGLRLDGT-EPVPKEAQEQLGLLAESAANLLKLAMQYGEVIIITNAETGWVELSAKKFMPSLLPLLMNVRVISARSTFESMY-AEPSQWKVAAFSQELSLAFAKSVHGTPKNIISLGDSVHERAALRKVTAGHSSVLAKSVKLVERPTIEQLKRQLDLVASCFDEVVNHKGHLDLMLTIQLLY 239
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A5A8CKT5_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CKT5_CAFRO) HSP 1 Score: 132 bits (333), Expect = 4.130e-31 Identity = 78/195 (40.00%), Postives = 119/195 (61.03%), Query Frame = 1 Query: 343 IVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGTVIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAM-RIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVL 924 I+FDWDDT+L S+W+ A+ ++ + LP +VR L +L+ SV+ L+ A +L V ++TNAE+GWV+LSA RF V PLL V V+SARS +EP P WK AF ++ DHF+ + V+S GDS E+ A+ ++ +G T+ K+VKF+ P E L Q+ V+ + IVS +++D++L Sbjct: 35 IIFDWDDTLLASTWL-ASRGMRLDEPEVLPEDVRAHLEELQTSVVALLEQAIKLAPVCVVTNAETGWVQLSARRFMPAVEPLLARVHVLSARSTYEP-VSRCPSEWKVRAFHQVLGDHFVTVDPLAARNVISFGDSIHERHAVHKVTAGVPNTL-TKSVKFVERPTSEQLKRQVELVSGCIGDIVSHTANLDLML 226
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Match: A0A7S0CQZ9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CQZ9_9EUKA) HSP 1 Score: 133 bits (334), Expect = 9.170e-31 Identity = 86/208 (41.35%), Postives = 122/208 (58.65%), Query Frame = 1 Query: 313 VVGDRTVEPLIVFDWDDTILTSSWIQANELLQAGSYDDLPLEVRRELAQLERSVIKCLKNARQLGT-VIIITNAESGWVELSAARFFVDVLPLLEGVPVISARSLFEPQFPGSPLCWKSAAFAYMMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLAYVTKNLASIVSSDSDVDIVLDAS 933 VVG TV VFDWDDT+L SS++ +N + S + +++++L QLE SV+ ++ A G V IITNAESGWVELSA +F V+PLL + VISARS +E +FP SPL WK AF + + F + + K V+S GDS+ E+ +R + AK++KF P E L Q+ VTK +I + D+D++L S Sbjct: 67 VVGPETVT---VFDWDDTLLPSSFLSSNGY-RLDSDKAMSDDLKKQLQQLESSVVGFIELALGKGDKVYIITNAESGWVELSAQKFLPGVVPLLSRLEVISARSTYEERFPESPLQWKYYAFQHNLAKAFTNDMK--AKSVISFGDSHVERHVVRAVAKSFHNSLAKSIKFAERPSLEQLRRQVELVTKCFQNIYCHEGDLDLMLTIS 268 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1371.2828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1371.2828.1 >prot_L-elsbetiae_contig1371.2828.1 ID=prot_L-elsbetiae_contig1371.2828.1|Name=mRNA_L-elsbetiae_contig1371.2828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=634bp MVQQEMPAHQQQHHHQKQHGTDENSSPPLLGRHTQGVMVPAEASTRSKQQback to top mRNA from alignment at L-elsbetiae_contig1371:2669..9205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1371.2828.1 ID=mRNA_L-elsbetiae_contig1371.2828.1|Name=mRNA_L-elsbetiae_contig1371.2828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6537bp|location=Sequence derived from alignment at L-elsbetiae_contig1371:2669..9205+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1371:2669..9205+ >mRNA_L-elsbetiae_contig1371.2828.1 ID=mRNA_L-elsbetiae_contig1371.2828.1|Name=mRNA_L-elsbetiae_contig1371.2828.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3804bp|location=Sequence derived from alignment at L-elsbetiae_contig1371:2669..9205+ (Laminarionema elsbetiae ELsaHSoW15)back to top |