mRNA_L-elsbetiae_contig1369.2805.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A8E5XRE0_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRE0_9PHAE) HSP 1 Score: 364 bits (934), Expect = 5.550e-124 Identity = 188/262 (71.76%), Postives = 217/262 (82.82%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSYLLNYPNSLYLEKKK-----KRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWL 771 L NRWI FGYFPLSNLYESLLFL+ +LL+V++FLEY+T+SKL GA ++PIILLI SFA+LTLPLEMQKA+ALVP+LQSNWLMMHVSLMMLSYA LIIGS++SILFLI+ L + + + F N + + I + + P LE+ K LL N+DNWSYRTISLGFPFLTIGIIAGA+WANEAWGSYWSWDPKETWAL+TWLVFA+YLHVRLIKGW+G PA+LGSIGFFVVWICYLGVNFLGQGLHSYGWL Sbjct: 56 LANRWIVFGYFPLSNLYESLLFLSCMLLLVHRFLEYRTQSKLFGATLLPIILLITSFADLTLPLEMQKANALVPSLQSNWLMMHVSLMMLSYAVLIIGSLISILFLIVCLPI--KVNYEEKFTNTNYEAGESIINLITQQPIKGELEQLKILYNMDYNSLLNNLDNWSYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIKGWDGEKPAMLGSIGFFVVWICYLGVNFLGQGLHSYGWL 315
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A8F0FAP1_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP1_9PHAE) HSP 1 Score: 353 bits (906), Expect = 1.360e-119 Identity = 181/283 (63.96%), Postives = 215/283 (75.97%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSY--------------------LLNYPNSLYLEKKK-----KRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 LL+RWI GYFPLSNLYESLLFL+ ++L VYQF+EYKTKSK+ GA+++P++L I FA+LTLPLEM+KASALVPALQSNWLMMHVSLMMLSYA LI+GS++SILFLII F ++ D E+ SY L+ + + K+K ++ + L N+DNW YRTISLGFPFLTIGIIAGA+WANEAWGSYWSWDPKETWAL+TWL+FA+YLH+RLIKGW G+ PAIL SIGFFVVWICYLGVNFLGQGLHSYGWL+ Sbjct: 56 LLSRWIQNGYFPLSNLYESLLFLSCIILFVYQFIEYKTKSKIFGAILLPLVLFITGFADLTLPLEMRKASALVPALQSNWLMMHVSLMMLSYAILIVGSLVSILFLII-------------FLSLSKDSEISFTSYGSYEEYARAENIEIRDLYNVFLDPLDKMSASKQKELRESRKLEFLYNLDNWGYRTISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHLRLIKGWVGKGPAILASIGFFVVWICYLGVNFLGQGLHSYGWLT 325
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A8F0F862_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F862_9PHAE) HSP 1 Score: 347 bits (889), Expect = 5.930e-117 Identity = 184/275 (66.91%), Postives = 209/275 (76.00%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPP--LFFFKLFFNIDSDLEVVINSYLLNYPNS---------------LYLEKKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L RW N+GYFPLSNLYESLLFLA LL +V+Q LEY+T+SK G +I+PIIL I SFA+LTLPLEMQKASALVPALQSNWLMMHVSLMMLSYA L++GS+ SI+FLI L LP K FF+ S++ + I Y NS Y + + K L +DNWSYRTISLGFP LTIGIIAGA+WANEAWGSYWSWDPKETWAL+TWLVFA+YLHVRLI GW G+ PAIL S+GFFVVWICYLGVNFLGQGLH+YGWLS Sbjct: 56 LATRWGNYGYFPLSNLYESLLFLACLLSLVHQILEYQTQSKFFGTIILPIILFITSFADLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYAILLLGSLFSIIFLITFLP-LPKESSSITKDFFSTQSEIALKIEEDFQKYLNSNSVEAGGIQINESIQKYYDLNLLKIKFLITLDNWSYRTISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHVRLIVGWSGKGPAILASLGFFVVWICYLGVNFLGQGLHTYGWLS 329
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A023HBC4_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A023HBC4_9STRA) HSP 1 Score: 343 bits (881), Expect = 5.480e-116 Identity = 179/260 (68.85%), Postives = 208/260 (80.00%), Query Frame = 1 Query: 7 NRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQN---LPPLFFFKLFFNIDSDLEVVINSYLLNYPNSLYLE-KKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 +RWI GYFPLSNLYESLLFL LL V ++E+KT SKL+GA++IP+ LLI FANLTLP+EMQKAS LVPALQSNWLM+HVS+MM+SY TLIIGS+LSILFL+IS L P+ + F+ V+I SY+ N +L E K + KLL N+DNWSYR I LGFPFLTIGIIAG +WANEAWGSYWSWDPKETWAL+TWLVFA+YLH RL KGWEGR A+LGS+GFFV+WICYLGVNFLG+GLHSYGWLS Sbjct: 59 SRWIVAGYFPLSNLYESLLFLTWTLLTVCLYIEFKTNSKLIGAILIPVALLINGFANLTLPIEMQKASPLVPALQSNWLMLHVSMMMVSYGTLIIGSLLSILFLVISKGKEVELKPVNNSYISFS-----NVMIESYV-NKSETLSTEFSKLGKQKLLYNLDNWSYRVIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWLVFATYLHSRLTKGWEGRKTAVLGSLGFFVIWICYLGVNFLGKGLHSYGWLS 312
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A2I4Q2E4_9PHAE (Cytochrome c biogenesis protein CcsA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2E4_9PHAE) HSP 1 Score: 342 bits (876), Expect = 3.040e-115 Identity = 167/258 (64.73%), Postives = 206/258 (79.84%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSYLLNYPNSLYLEKKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 LLNRW+ +GYFP+SNLYESLLFL+ LLLI++Q LEY+T+S++ GAL++P IL I SFA+LTLPLEMQKA+ALVP+LQSNWLMMHVSLM+LSYA L++GS+ SI+FL++ L + K N ++ + + + N E + L +DNWSY+ ISLGFP LTIGIIAGA+WANEAWGSYWSWDPKETWAL+TWLVFA+YLH+RLIKGW G+ PAIL S+GFF +W+CYLGVNFLGQGLHSYGWLS Sbjct: 56 LLNRWVTYGYFPISNLYESLLFLSCLLLIIHQILEYQTQSRIFGALLLPSILFITSFADLTLPLEMQKATALVPSLQSNWLMMHVSLMLLSYAILLLGSLFSIIFLVLFLPSER-----KNEINDKLKIKTITKKSIFAFYNIKAFEPYIPSTEFLFILDNWSYKMISLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHIRLIKGWSGKGPAILASLGFFFIWVCYLGVNFLGQGLHSYGWLS 308
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A2U9NM76_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Proboscia sp. TaxID=1923967 RepID=A0A2U9NM76_9STRA) HSP 1 Score: 342 bits (876), Expect = 3.150e-115 Identity = 176/271 (64.94%), Postives = 208/271 (76.75%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSY------LLNY-------PNSLYLEKKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L +RWI GYFPLSNLYESLLFL LL +Y ++E+KTKSKL+GA++IP+ LLI FANLTL +MQKAS LVPALQSNWLMMHVS+MMLSYA LI+GS+L ILFL+IS D DL+V+ SY ++NY P+ +LE K KLL +IDNWSYR I LGFPFLT+GIIAG +WANEAWGSYWSWDPKETWAL+TW++FA+YLH R+ KGWEG+ AILG+IGFFV+WICYLGVNFLG+GLHSYGWLS Sbjct: 57 LCSRWIISGYFPLSNLYESLLFLTWTLLTIYLYIEFKTKSKLMGAILIPVALLINGFANLTLSADMQKASPLVPALQSNWLMMHVSMMMLSYAMLIMGSLLCILFLVISKSK-------------DVDLQVLDKSYSPLYNVMVNYYEAKLFSPSDEFLELGKL--KLLHSIDNWSYRIIGLGFPFLTVGIIAGGVWANEAWGSYWSWDPKETWALITWIIFATYLHSRITKGWEGKKTAILGTIGFFVIWICYLGVNFLGKGLHSYGWLS 312
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A2U9NQC9_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Actinocyclus subtilis TaxID=1630683 RepID=A0A2U9NQC9_9STRA) HSP 1 Score: 341 bits (874), Expect = 6.340e-115 Identity = 178/260 (68.46%), Postives = 206/260 (79.23%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSYLLNY--PNSLYLEKKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L +RWI GYFPLSNLYESLLFL LL +Y ++EYKTKSKL+GA++IP+ LL+ FANLTL EMQKAS LVPALQSNWLMMHVS+MMLSYATLIIGS+L ILFL+IS N + F + + V+ N Y L P+ E K KLL ++DNWSYR I LGFPFLTIGIIAG +WANEAWGSYWSWDPKETWAL+TWLVFA+YLH RLIKGWEG+ AILGS+GFF++WICYLGVNFLG+GLHSYGW+S Sbjct: 57 LCSRWIVAGYFPLSNLYESLLFLTWTLLTLYLYIEYKTKSKLIGAILIPVALLVNGFANLTLSTEMQKASPLVPALQSNWLMMHVSMMMLSYATLIIGSLLCILFLVIS--NYQDIDFQSINNSSLPFSNVLFNYYELKLFSPSDEISELGKL--KLLYSLDNWSYRIIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWLVFATYLHSRLIKGWEGKKTAILGSLGFFIIWICYLGVNFLGKGLHSYGWVS 312
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A7S6U9V9_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9V9_9STRA) HSP 1 Score: 342 bits (877), Expect = 9.090e-115 Identity = 184/300 (61.33%), Postives = 213/300 (71.00%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLII-------------------------SLQNLPPLFFFKL-----------------FFNIDSDLEVVINSYLLNYPNSLYLEKKKKRGKLLQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L+NRWIN GYFPLSNLYESLLFL+ +LL ++Q +EYK +SKLLGA+++PIIL I F++LTLP+EMQKAS+LVPALQSNWLMMHVSLMMLSYATLI+GS+LSILF +I L L + ++L FF I L+ I +Y Y S R +LL ID WSYR ISLGFPFLTIGIIAGA+WANEAWGSYWSWDPKETWAL+TWL+FA+YLH+RLIKGW G+ PA L SIGFFVVWICYLGVNFLGQGLHSYGWLS Sbjct: 56 LMNRWINHGYFPLSNLYESLLFLSCILLFIHQIIEYKIQSKLLGAILLPIILFINGFSSLTLPIEMQKASSLVPALQSNWLMMHVSLMMLSYATLILGSLLSILFSLIFVTAPKDLSKLVKPWERPFKTNSFERLYELTDIDRYELPQQDFLTRGKFTASSDSFFEISPGLQTAIPNYDWRYEFSRSFSVIF-RIRLLHKIDIWSYRIISLGFPFLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLIFAAYLHIRLIKGWHGKRPAFLASIGFFVVWICYLGVNFLGQGLHSYGWLS 354
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A089VPA9_9STRA (Cytochrome c biogenesis protein CcsA n=3 Tax=Rhizosoleniaceae TaxID=33845 RepID=A0A089VPA9_9STRA) HSP 1 Score: 340 bits (872), Expect = 1.280e-114 Identity = 176/269 (65.43%), Postives = 207/269 (76.95%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSYLLNYPNSL-YLEKK--------KKRGKL--LQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L +RWI GYFPLSNLYESLLFL LL +Y FLE+KTKSKL+GA++IP+ LLI FANLTL EMQK+S LVPALQSNWLMMHVS+MMLSYATLI+GS+L ILFL++S D DL+++ SYL Y L Y E K + GKL L ++DNWSYR I LGFPFLTIGIIAG +WANEAWGSYWSWDPKETWAL+TW++FA+YLH R+ KGWEG+ AILG++GFFV+W+CYLGVNFLG+GLHSYGWLS Sbjct: 57 LCSRWIVAGYFPLSNLYESLLFLTWTLLTIYLFLEFKTKSKLMGAILIPVALLISGFANLTLSPEMQKSSPLVPALQSNWLMMHVSMMMLSYATLIMGSLLCILFLVVSNYE-------------DVDLQLIDESYLPLYNVMLDYYETKLFSPSDEVSELGKLKLLHSLDNWSYRIIGLGFPFLTIGIIAGGVWANEAWGSYWSWDPKETWALITWIIFATYLHSRITKGWEGKKTAILGALGFFVIWVCYLGVNFLGKGLHSYGWLS 312
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Match: A0A023JEL7_9STRA (Cytochrome c biogenesis protein CcsA n=1 Tax=Eunotia naegelii TaxID=1458866 RepID=A0A023JEL7_9STRA) HSP 1 Score: 339 bits (869), Expect = 3.640e-114 Identity = 176/269 (65.43%), Postives = 208/269 (77.32%), Query Frame = 1 Query: 1 LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIILLIYSFANLTLPLEMQKASALVPALQSNWLMMHVSLMMLSYATLIIGSVLSILFLIISLQNLPPLFFFKLFFNIDSDLEVVINSYLLNYPNSL-YLEKK--------KKRGKL--LQNIDNWSYRTISLGFPFLTIGIIAGAIWANEAWGSYWSWDPKETWALVTWLVFASYLHVRLIKGWEGRNPAILGSIGFFVVWICYLGVNFLGQGLHSYGWLS 774 L +RWI GYFPLSNLYESLLFL +LL +Y ++E KTKSKL+GAL++P+ LLI FANLTL EMQKAS LVPALQSNWLMMHVS+M+LSYATLIIGS+L ILFL+I+ D DL+++ +S L Y L Y E K + GKL LQ++DNWSYR I LGFPFLTIGII+GA+WANEAWGSYWSWDPKETWAL+TWLVFA+YLH R+ KGWEG+ A+LG IGFFV+W+CYLGVNFLG+GLHSYGW+S Sbjct: 57 LCSRWIIAGYFPLSNLYESLLFLTWMLLTIYLYIETKTKSKLIGALLVPLALLINGFANLTLSPEMQKASPLVPALQSNWLMMHVSMMLLSYATLIIGSLLCILFLVIARYK-------------DIDLKIIDDSSLPLYNIMLDYYEAKLLSPSTEISELGKLKLLQSLDNWSYRIIGLGFPFLTIGIISGAVWANEAWGSYWSWDPKETWALITWLVFATYLHARITKGWEGKKTAVLGGIGFFVIWVCYLGVNFLGKGLHSYGWIS 312 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1369.2805.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1369.2805.1 >prot_L-elsbetiae_contig1369.2805.1 ID=prot_L-elsbetiae_contig1369.2805.1|Name=mRNA_L-elsbetiae_contig1369.2805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp LLNRWINFGYFPLSNLYESLLFLASLLLIVYQFLEYKTKSKLLGALIIPIback to top mRNA from alignment at L-elsbetiae_contig1369:5785..6561- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1369.2805.1 ID=mRNA_L-elsbetiae_contig1369.2805.1|Name=mRNA_L-elsbetiae_contig1369.2805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=777bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:5785..6561- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1369:5785..6561- >mRNA_L-elsbetiae_contig1369.2805.1 ID=mRNA_L-elsbetiae_contig1369.2805.1|Name=mRNA_L-elsbetiae_contig1369.2805.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1554bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:5785..6561- (Laminarionema elsbetiae ELsaHSoW15)back to top |