mRNA_L-elsbetiae_contig1369.2802.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1369.2802.1
Unique NamemRNA_L-elsbetiae_contig1369.2802.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A4D6WWI9_9FLOR (Probable RuBisCO transcriptional regulator n=1 Tax=Pleonosporium borreri TaxID=2575635 RepID=A0A4D6WWI9_9FLOR)

HSP 1 Score: 364 bits (934), Expect = 4.380e-123
Identity = 187/305 (61.31%), Postives = 235/305 (77.05%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFL 915
            M++ PF L QL+I+K I  EGSFK+AA  LY+SQP I+ QIQ LEK ++LPLFER   K  LTE G LLLQYG RIL LCEE  + +  +++   G L IGASQTTGTYL+PR++GLFR+RYP ++VQL+++STR I+WSVANGQID+A++GGE+P  LK IL++TSY EDEL LILP SH+ S   +I+KEDLY L FIAL+K STIR VID++LN+++IDSSR KIEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I+ + INR L I+ N NRYKSK    F   IL LF+
Sbjct:    1 MRDVPFTLDQLRILKAIIKEGSFKRAANSLYVSQPAISLQIQNLEKQLNLPLFERNNKKATLTEAGNLLLQYGNRILALCEETCRALEDIQNLQGGSLIIGASQTTGTYLMPRLLGLFRQRYPQVNVQLQVHSTRLISWSVANGQIDLAVIGGEVPQELKDILQVTSYAEDELALILPVSHNFSKINDIQKEDLYHLRFIALDKQSTIRKVIDKVLNQHDIDSSRFKIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGIIHSAKIKNVTINRMLSIIINPNRYKSKAADTFSKEILTLFV 305          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A1X9PTY7_9RHOD (Probable RuBisCO transcriptional regulator n=2 Tax=Rhodellaceae TaxID=661029 RepID=A0A1X9PTY7_9RHOD)

HSP 1 Score: 362 bits (930), Expect = 2.030e-122
Identity = 187/305 (61.31%), Postives = 237/305 (77.70%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFL 915
            M N PF L QL+I+K IA EGSFK+AA  LYISQP ++ QIQ LE+ +++PLF+R   K  LTE GQLLL+YGIRIL LCEE  + +  ++    GKL +GASQTTGTYL+PR+IGLFR+RYP ++VQL+++STRRI+WSVANGQ+DIA+VGGE+P  L++IL++TSY EDEL LILPKSH  +  + IKKEDLY+L FIAL+  STIR VID++LN + IDS+R  IEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I  + I RTL I+ N NRYKSK  + F + IL LF+
Sbjct:    1 MTNLPFTLDQLRILKAIAIEGSFKRAADSLYISQPAVSLQIQNLERQLNVPLFDRGIRKSKLTEAGQLLLRYGIRILALCEETCRALEDVQTLQGGKLIVGASQTTGTYLMPRLIGLFRQRYPQVTVQLQVHSTRRISWSVANGQVDIAVVGGEVPSELQEILQVTSYAEDELALILPKSHPFANIEHIKKEDLYRLRFIALDAQSTIRKVIDKVLNYHGIDSTRFAIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGILHWSRIEDITIKRTLSIIVNPNRYKSKAAETFNHEILTLFV 305          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A1C9CEC5_9RHOD (Probable RuBisCO transcriptional regulator n=5 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1C9CEC5_9RHOD)

HSP 1 Score: 361 bits (927), Expect = 5.420e-122
Identity = 184/306 (60.13%), Postives = 235/306 (76.80%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFLD 918
            M + PF + QL+I+K I +EGSFK+AA  LYISQP ++ Q+Q LE+ +++PLF R   K  LTE+GQLL++YG RIL LCEE  + +  L+    G L +GASQTTGTYL+PR+IGLFR+RYP ++VQL+++STRRI+WSVANGQ+D+A++GGEIP  L+Q+L++TSY EDEL LILPKSH  S    IKKEDLY+L FIAL+  STIRTVIDQILN+N IDSSR  IEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I  + I R L I+ N NRY+SK  + F   IL LF++
Sbjct:    1 MTDIPFTIDQLRILKAIVSEGSFKRAADALYISQPAVSLQVQSLERQLNVPLFNRGGKKARLTESGQLLIRYGGRILALCEETCRALEDLQSLQGGTLIVGASQTTGTYLMPRLIGLFRQRYPQVAVQLQVHSTRRISWSVANGQVDLAVIGGEIPSELQQVLQVTSYAEDELALILPKSHPFSTSANIKKEDLYRLRFIALDTQSTIRTVIDQILNQNGIDSSRFMIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGILHWAKIENVTIKRMLSIIINPNRYRSKAAETFTQEILTLFVN 306          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A1X9PUH9_9RHOD (Probable RuBisCO transcriptional regulator n=3 Tax=Porphyridiaceae TaxID=2799 RepID=A0A1X9PUH9_9RHOD)

HSP 1 Score: 359 bits (921), Expect = 4.120e-121
Identity = 186/312 (59.62%), Postives = 238/312 (76.28%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFLDYKNKNE 936
            M + PF L QL+I+K IA EGSFK+AA  LYISQP ++ Q+Q LE+ +++PLF+R   K +LT+ G LLL +G RIL +CEE  + +  L++   G L +GASQTTGTYL+PR+IGLFR+RYP + VQL+++STRRIAWSVANGQID+A++GGEIP  LKQ L+ITSY EDEL LILPKSH  S  K+IKKEDLY+L FIAL+  STIR VID+ILN++ IDSSR  IEMELNSIEAIKNAVQSGLGVAFVS S++ KEL+L ++    I  + + R L I+ N NRY+SK  + F+  IL LF+    ++E
Sbjct:    1 MTDLPFTLDQLRILKAIATEGSFKRAADSLYISQPAVSLQVQNLERQLNVPLFDRGGKKAHLTQAGDLLLCHGNRILAMCEETCRALEDLQNLQGGSLIVGASQTTGTYLMPRLIGLFRQRYPQVIVQLQVHSTRRIAWSVANGQIDLAVIGGEIPLELKQTLQITSYAEDELALILPKSHPFSKMKDIKKEDLYRLRFIALDTQSTIRKVIDKILNQHGIDSSRFTIEMELNSIEAIKNAVQSGLGVAFVSVSAIAKELELGILHWAKIENVTVKRMLSIVINPNRYRSKAAERFRQEILTLFVSNNTQSE 312          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: M5DDA8_CHOCR (Probable RuBisCO transcriptional regulator n=4 Tax=Rhodymeniophycidae TaxID=2045261 RepID=M5DDA8_CHOCR)

HSP 1 Score: 358 bits (919), Expect = 8.290e-121
Identity = 184/305 (60.33%), Postives = 235/305 (77.05%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFL 915
            M++ PF L QL+I+K I  EGSFKKAA  LY+SQP I+ QIQ LEK +++PLFER   K  LTE G LLL+YG RIL LCEE  + +  +++   G L IGASQTTGTYL+PR+IGLFR+RYP ++VQL+++STR I+WSVANGQ+D+A++GGE+P  LK+IL++TSY EDEL LILP SH+ S   +I+KEDLY+L FIAL+  STIR VID++LN+++IDSSR KIEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I  + I R L I+ N NRYKSK  + F   IL LF+
Sbjct:    1 MRDLPFTLDQLRILKAIIKEGSFKKAADSLYVSQPAISLQIQNLEKQLNIPLFERTNKKATLTEAGSLLLRYGGRILALCEETCRALDDVQNLQGGTLVIGASQTTGTYLMPRLIGLFRQRYPRVNVQLQVHSTRLISWSVANGQVDLAVIGGEVPSELKEILQVTSYAEDELALILPTSHNFSKLSDIQKEDLYRLRFIALDTQSTIRKVIDKVLNQHDIDSSRFKIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGILHWARIENVTIKRMLSIIVNPNRYKSKAAETFSQEILTLFV 305          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: UPI001FCDD245 (LysR transcriptional regulator n=1 Tax=Porphyridium aerugineum TaxID=2792 RepID=UPI001FCDD245)

HSP 1 Score: 358 bits (919), Expect = 1.090e-120
Identity = 187/309 (60.52%), Postives = 233/309 (75.40%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFLDYKN 927
            M + PFNL QL+I+K I  EGSFK+AA+ LYISQP ++ Q+Q LEK +++PLF+R      LTE G LLLQ G RIL +CEE  + +  L++   G L +GASQTTGTYL+PR+IGLFR+RYP + VQL+++STRRIAWSVANGQID+A++GGEIP  L+Q L ITSY EDE  LILPKSH  S  K IKKEDLY+L FIAL+ +STIR VID+ILN++ IDSSR  IEMELNSIEAIKNAVQSGLGVAFVS S++ KEL+L ++    I  + I R L I+ N NRY+SK  + F+  IL LF+   N
Sbjct:    1 MTDLPFNLDQLRILKAIVAEGSFKRAAESLYISQPAVSLQVQNLEKQLNIPLFDRGGKTAKLTEAGDLLLQNGNRILAMCEETCRALEDLQNLQGGSLIVGASQTTGTYLMPRLIGLFRQRYPQVVVQLQVHSTRRIAWSVANGQIDLAVIGGEIPVELRQTLHITSYAEDEFALILPKSHPFSKMKNIKKEDLYRLRFIALDSHSTIRKVIDKILNEHGIDSSRFTIEMELNSIEAIKNAVQSGLGVAFVSVSAIAKELELGIIHWAKIENVTIKRMLSIIVNPNRYRSKAAERFRDEILTLFVSNNN 309          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A1C9CB46_9FLOR (Probable RuBisCO transcriptional regulator n=21 Tax=Florideophyceae TaxID=2806 RepID=A0A1C9CB46_9FLOR)

HSP 1 Score: 358 bits (918), Expect = 1.180e-120
Identity = 183/305 (60.00%), Postives = 235/305 (77.05%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFL 915
            M++ PF L QL+I+K I  EGSFK+AA  LY+SQP I+ QIQ LEK +++PLFER   K  LTE G LLL+YG RIL LCEE  + +  L++   G L IGASQTTGTYL+PR+IGLFR+RYP ++VQL+++STR I+WSVANGQ+D+A++GGE+P  LK++L++TSY EDEL LILP SH+ S   +I+KEDLY+L FIAL+  STIR VID++LN+++IDSSR KIEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I  + I R L I+ N NRYKSK  + F   IL LF+
Sbjct:    1 MRDLPFTLDQLRILKAIIKEGSFKRAADSLYVSQPAISLQIQNLEKQLNIPLFERSNKKATLTEAGNLLLRYGGRILALCEETCRALEDLQNLQGGTLVIGASQTTGTYLMPRLIGLFRQRYPQVNVQLQVHSTRLISWSVANGQVDLAVIGGEVPNELKEVLQVTSYAEDELALILPTSHTFSKVADIQKEDLYRLRFIALDTQSTIRKVIDKVLNQHDIDSSRFKIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGILHWAKIENVTIKRMLSIIINPNRYKSKAAETFSKEILTLFV 305          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: W0RYG2_PORPP (Probable RuBisCO transcriptional regulator n=2 Tax=Porphyridium TaxID=2791 RepID=W0RYG2_PORPP)

HSP 1 Score: 357 bits (916), Expect = 2.370e-120
Identity = 185/311 (59.49%), Postives = 236/311 (75.88%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFLDYKNKN 933
            M + PF + QL+I+K IA EGSFK+AA  LYISQP ++ Q+Q LEK +++PLF+R   K  LTE G LLL+ G RIL +CEE  + +  L++   G L +GASQTTGTYL+PR+IGLFR++YP + VQL+++STRRIAWSVANGQID+A++GGEIP  LKQIL+ITSY EDEL LILPKSH  S  + IKKEDLY+L FI L+ +STIR VID+ILN++ IDSSRL +EMELNSIEAIKNAVQSGLGVAFVS S++ KEL+L ++    I  + + R L IL N +RY+SK  + F+  IL LF+     N
Sbjct:    1 MTDLPFTIDQLRILKAIATEGSFKRAADSLYISQPAVSLQVQNLEKQLNIPLFDRGGKKACLTEAGDLLLRNGTRILAMCEETCRALEDLQNLQGGSLIVGASQTTGTYLMPRLIGLFRQQYPQVIVQLQVHSTRRIAWSVANGQIDLAVIGGEIPSELKQILQITSYAEDELALILPKSHPFSKYQNIKKEDLYRLRFITLDTHSTIRKVIDKILNQHGIDSSRLTVEMELNSIEAIKNAVQSGLGVAFVSVSAIAKELELGILHWAKIENVTVKRMLSILVNPSRYRSKAAERFRNEILTLFVTTNTNN 311          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A0H4T2U9_9CRYP (Probable RuBisCO transcriptional regulator n=1 Tax=Teleaulax amphioxeia TaxID=77931 RepID=A0A0H4T2U9_9CRYP)

HSP 1 Score: 357 bits (915), Expect = 2.930e-120
Identity = 186/311 (59.81%), Postives = 238/311 (76.53%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFLD-YKNK 930
            M + PF L QL+I+K IA+EGSFKKAA+ LYISQP ++ Q+Q LEK + +P+F+R   K   TE G++LL+YG RIL LC+E  + I  L+    G L IGASQTTGTYL+PR+IGLFR++YP I+VQL+++STRRI+WSVANGQ+++AI+GG++PP L  +L+IT Y EDEL LILPK H  S  + I+KEDLY+L FIAL+  STIR VIDQ+L +N IDS+R KIEMELNS+EAIKNAVQSGLG AFVS S++ KEL+L ++Q V I  + I RTL I+ N NRY+SK  Q F   IL LF+  YKNK
Sbjct:    1 MTDLPFTLDQLRILKAIASEGSFKKAAESLYISQPAVSLQVQNLEKQLSVPIFDRGNRKASFTEEGEVLLRYGSRILSLCDESCRAIEDLRCLNGGTLVIGASQTTGTYLMPRLIGLFRQKYPQIAVQLQVHSTRRISWSVANGQVNLAIIGGKVPPELDNVLQITPYAEDELALILPKLHPFSKLEYIQKEDLYRLRFIALDTQSTIRKVIDQVLKQNGIDSTRFKIEMELNSVEAIKNAVQSGLGAAFVSISAIAKELELGILQWVKIEDITIKRTLSIVVNPNRYRSKASQAFSKEILTLFVSPYKNK 311          
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Match: A0A173FZT2_GASCM (Probable RuBisCO transcriptional regulator n=85 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A173FZT2_GASCM)

HSP 1 Score: 356 bits (914), Expect = 5.100e-120
Identity = 182/305 (59.67%), Postives = 233/305 (76.39%), Query Frame = 1
Query:    1 MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDLPLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFIGASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAIVGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFIALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAFVSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNILNLFL 915
            M++ PF L QL+I+K I  EGSFKKAA  LY+SQP ++ Q+Q LEK +++PLF R   K  LTE G LLL YG RIL LCEE  + +  +++   G L IGASQTTGTYL+PR+IGLFR+RYP + VQL+++STR I+WSVANGQ+D+A++GGE+P  LK+IL+ITSY EDEL LILP SH+ S   +I+KEDLY+L FIAL+  STIR VID++LN+++IDSSR KIEMELNSIEAIKNAVQSGLG AFVS S++ KEL+L ++    I+ + I R L I+ N NRYKSK  + F   IL LF+
Sbjct:    1 MRDLPFTLDQLRILKAIVREGSFKKAADSLYVSQPAVSLQVQNLEKQLNMPLFIRNNKKATLTEAGSLLLGYGSRILALCEETCRALEDVQNLQGGTLVIGASQTTGTYLMPRLIGLFRQRYPQVKVQLQVHSTRLISWSVANGQVDLAVIGGEVPHELKEILQITSYAEDELALILPTSHTFSKVSDIQKEDLYRLRFIALDTQSTIRKVIDKVLNQHDIDSSRFKIEMELNSIEAIKNAVQSGLGAAFVSVSAIAKELELGILHWARIKNVTIKRMLSIIVNPNRYKSKAAETFSQEILTLFV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1369.2802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D6WWI9_9FLOR4.380e-12361.31Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A1X9PTY7_9RHOD2.030e-12261.31Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A1C9CEC5_9RHOD5.420e-12260.13Probable RuBisCO transcriptional regulator n=5 Tax... [more]
A0A1X9PUH9_9RHOD4.120e-12159.62Probable RuBisCO transcriptional regulator n=3 Tax... [more]
M5DDA8_CHOCR8.290e-12160.33Probable RuBisCO transcriptional regulator n=4 Tax... [more]
UPI001FCDD2451.090e-12060.52LysR transcriptional regulator n=1 Tax=Porphyridiu... [more]
A0A1C9CB46_9FLOR1.180e-12060.00Probable RuBisCO transcriptional regulator n=21 Ta... [more]
W0RYG2_PORPP2.370e-12059.49Probable RuBisCO transcriptional regulator n=2 Tax... [more]
A0A0H4T2U9_9CRYP2.930e-12059.81Probable RuBisCO transcriptional regulator n=1 Tax... [more]
A0A173FZT2_GASCM5.100e-12059.67Probable RuBisCO transcriptional regulator n=85 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1369contigL-elsbetiae_contig1369:2157..3095 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score345.1
Seed ortholog evalue3.4e-92
Seed eggNOG ortholog203124.Tery_2009
Preferred namerbcR
KEGG koko:K21703
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Bacterial regulatory helix-turn-helix protein, lysR family
EggNOG OGs1G030@1117,1H7BX@1150,COG0583@1,COG0583@2
COG Functional cat.K
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons1
Model size939
Cds size939
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815532.6515744-CDS-L-elsbetiae_contig1369:2156..30951622815532.6515744-CDS-L-elsbetiae_contig1369:2156..3095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1369 2157..3095 +
1691682944.4752803-CDS-L-elsbetiae_contig1369:2156..30951691682944.4752803-CDS-L-elsbetiae_contig1369:2156..3095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1369 2157..3095 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1369.2802.1prot_L-elsbetiae_contig1369.2802.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1369 2157..3095 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1369.2802.1

>prot_L-elsbetiae_contig1369.2802.1 ID=prot_L-elsbetiae_contig1369.2802.1|Name=mRNA_L-elsbetiae_contig1369.2802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MKNFPFNLKQLKIIKTIANEGSFKKAAQILYISQPNITAQIQKLEKHIDL
PLFERKKNKIYLTETGQLLLQYGIRILKLCEEVHKDILKLKHSPNGKLFI
GASQTTGTYLLPRIIGLFRKRYPDISVQLELNSTRRIAWSVANGQIDIAI
VGGEIPPNLKQILEITSYVEDELILILPKSHSLSYKKEIKKEDLYKLNFI
ALNKNSTIRTVIDQILNKNNIDSSRLKIEMELNSIEAIKNAVQSGLGVAF
VSASSVYKELKLNVVQCVNIRKLKINRTLFILTNRNRYKSKILQNFQYNI
LNLFLDYKNKNE*
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mRNA from alignment at L-elsbetiae_contig1369:2157..3095+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1369.2802.1 ID=mRNA_L-elsbetiae_contig1369.2802.1|Name=mRNA_L-elsbetiae_contig1369.2802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=939bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:2157..3095+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAATTTTCCTTTTAATTTAAAACAATTAAAAATTATTAAAACAAT TGCAAATGAAGGAAGTTTTAAAAAAGCAGCACAAATACTTTATATATCAC AACCTAATATAACGGCTCAAATACAAAAATTAGAAAAACATATTGATCTA CCTTTATTTGAAAGAAAAAAAAATAAAATTTATTTAACGGAAACAGGACA ATTACTTTTACAATATGGAATTCGAATATTAAAATTATGTGAAGAAGTCC ATAAAGATATTTTAAAACTTAAACATTCTCCAAATGGTAAATTATTTATT GGAGCTAGTCAAACTACTGGAACTTATTTATTACCTAGAATTATCGGATT GTTTCGTAAAAGATATCCAGATATTAGTGTACAACTAGAATTAAATTCGA CACGTCGAATTGCTTGGAGTGTAGCAAATGGACAAATTGATATTGCAATT GTTGGTGGAGAAATTCCTCCGAATTTAAAACAAATATTAGAAATTACTTC TTATGTCGAAGATGAATTAATTTTAATTTTACCAAAATCACATTCATTAT CTTATAAAAAAGAAATAAAAAAAGAAGATTTATATAAATTAAATTTTATT GCTCTTAATAAAAATTCAACTATTCGAACCGTTATTGATCAAATATTAAA TAAAAATAATATTGATAGTTCTCGTTTAAAAATTGAAATGGAATTAAATT CAATTGAAGCAATAAAAAATGCTGTTCAATCTGGATTAGGGGTGGCTTTT GTCTCTGCCTCATCAGTCTATAAAGAATTAAAATTAAATGTTGTTCAGTG TGTTAATATTAGAAAATTAAAAATTAATCGTACATTGTTTATTCTTACAA ATCGCAATCGTTATAAATCGAAAATATTACAAAATTTTCAATATAATATA TTAAATTTATTTTTAGATTATAAAAATAAAAATGAATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1369:2157..3095+

>mRNA_L-elsbetiae_contig1369.2802.1 ID=mRNA_L-elsbetiae_contig1369.2802.1|Name=mRNA_L-elsbetiae_contig1369.2802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1878bp|location=Sequence derived from alignment at L-elsbetiae_contig1369:2157..3095+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAATTTTCCTTTTAATTTAAAACAATTAAAAATTATTAAAACAAT
TGCAAATGAAGGAAGTTTTAAAAAAGCAGCACAAATACTTTATATATCAC
AACCTAATATAACGGCTCAAATACAAAAATTAGAAAAACATATTGATCTA
CCTTTATTTGAAAGAAAAAAAAATAAAATTTATTTAACGGAAACAGGACA
ATTACTTTTACAATATGGAATTCGAATATTAAAATTATGTGAAGAAGTCC
ATAAAGATATTTTAAAACTTAAACATTCTCCAAATGGTAAATTATTTATT
GGAGCTAGTCAAACTACTGGAACTTATTTATTACCTAGAATTATCGGATT
GTTTCGTAAAAGATATCCAGATATTAGTGTACAACTAGAATTAAATTCGA
CACGTCGAATTGCTTGGAGTGTAGCAAATGGACAAATTGATATTGCAATT
GTTGGTGGAGAAATTCCTCCGAATTTAAAACAAATATTAGAAATTACTTC
TTATGTCGAAGATGAATTAATTTTAATTTTACCAAAATCACATTCATTAT
CTTATAAAAAAGAAATAAAAAAAGAAGATTTATATAAATTAAATTTTATT
GCTCTTAATAAAAATTCAACTATTCGAACCGTTATTGATCAAATATTAAA
TAAAAATAATATTGATAGTTCTCGTTTAAAAATTGAAATGGAATTAAATT
CAATTGAAGCAATAAAAAATGCTGTTCAATCTGGATTAGGGGTGGCTTTT
GTCTCTGCCTCATCAGTCTATAAAGAATTAAAATTAAATGTTGTTCAGTG
TGTTAATATTAGAAAATTAAAAATTAATCGTACATTGTTTATTCTTACAA
ATCGCAATCGTTATAAATCGAAAATATTACAAAATTTTCAATATAATATA
TTAAATTTATTTTTAGATTATAAAAATAAAAATGAATAAATGAAAAATTT
TCCTTTTAATTTAAAACAATTAAAAATTATTAAAACAATTGCAAATGAAG
GAAGTTTTAAAAAAGCAGCACAAATACTTTATATATCACAACCTAATATA
ACGGCTCAAATACAAAAATTAGAAAAACATATTGATCTACCTTTATTTGA
AAGAAAAAAAAATAAAATTTATTTAACGGAAACAGGACAATTACTTTTAC
AATATGGAATTCGAATATTAAAATTATGTGAAGAAGTCCATAAAGATATT
TTAAAACTTAAACATTCTCCAAATGGTAAATTATTTATTGGAGCTAGTCA
AACTACTGGAACTTATTTATTACCTAGAATTATCGGATTGTTTCGTAAAA
GATATCCAGATATTAGTGTACAACTAGAATTAAATTCGACACGTCGAATT
GCTTGGAGTGTAGCAAATGGACAAATTGATATTGCAATTGTTGGTGGAGA
AATTCCTCCGAATTTAAAACAAATATTAGAAATTACTTCTTATGTCGAAG
ATGAATTAATTTTAATTTTACCAAAATCACATTCATTATCTTATAAAAAA
GAAATAAAAAAAGAAGATTTATATAAATTAAATTTTATTGCTCTTAATAA
AAATTCAACTATTCGAACCGTTATTGATCAAATATTAAATAAAAATAATA
TTGATAGTTCTCGTTTAAAAATTGAAATGGAATTAAATTCAATTGAAGCA
ATAAAAAATGCTGTTCAATCTGGATTAGGGGTGGCTTTTGTCTCTGCCTC
ATCAGTCTATAAAGAATTAAAATTAAATGTTGTTCAGTGTGTTAATATTA
GAAAATTAAAAATTAATCGTACATTGTTTATTCTTACAAATCGCAATCGT
TATAAATCGAAAATATTACAAAATTTTCAATATAATATATTAAATTTATT
TTTAGATTATAAAAATAAAAATGAATAA
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